Basic Information

Faculty

• Faculty of Engineering

Email Address

• Email Address

  michimori.yuta.6hkyoto-u.ac.jp

Academic Degree

• 23 Mar. 2021

  京都大学修士（工学）
• 23 Jul. 2024

  京都大学博士（工学）

Academic Resume (Undergraduate School/Majors)

• 神戸大学附属中等教育学校, 後期課程, 卒業
• 京都大学, 工学部工業化学科, 卒業

ID,URL

• ORCID ID

  0009-0008-9413-9121

• J-Global ID

  202401020628823541

researchmap URL

• https://researchmap.jp/Yuta_Michimori

Research

Papers

• Substrate specificity of an archaeal thioesterase from Thermococcus kodakarensis.

  Yu Su; Jianqiang Jin; Yuta Michimori; Haruyuki Atomi

  Journal of biochemistry, 04 Jun. 2026

  
• The arginine synthetase pathway is responsible for carbamoyl phosphate synthesis in Thermococcus kodakarensis

  Yuta Michimori; Naoki Ohashi; Claudia Szymanski; Haruyuki Atomi

  Frontiers in Microbiology, 29 May 2026

  
• TK2268 encodes the major aminotransferase involved in the conversion from oxaloacetic acid to aspartic acid in Thermococcus kodakarensis.

  Yu Su; Yuta Michimori; Yuto Fukuyama; Shigeru Shimamura; Takuro Nunoura; Haruyuki Atomi

  Applied and environmental microbiology, 24 Feb. 2025

  
• Crystal structure of GTP-dependent dephospho-coenzyme A kinase from the hyperthermophilic archaeon, Thermococcus kodakarensis.

  Akiko Kita; Yuna Ishida; Takahiro Shimosaka; Yuta Michimori; Kira Makarova; Eugene Koonin; Haruyuki Atomi; Kunio Miki

  Proteins, Jun. 2024

  
• Removal of phosphoglycolate in hyperthermophilic archaea.

  Yuta Michimori; Rikihisa Izaki; Yu Su; Yuto Fukuyama; Shigeru Shimamura; Karin Nishimura; Yuya Miwa; Sotaro Hamakita; Takahiro Shimosaka; Yuki Makino; Ryo Takeno; Takaaki Sato; Haruki Beppu; Isaac Cann; Tamotsu Kanai; Takuro Nunoura; Haruyuki Atomi

  Proceedings of the National Academy of Sciences of the United States of America, 16 Apr. 2024

  
• An energy-conserving reaction in amino acid metabolism catalyzed by arginine synthetase.

  Yuta Michimori; Yuusuke Yokooji; Haruyuki Atomi

  Proceedings of the National Academy of Sciences of the United States of America, 16 Apr. 2024

  Access this paper :

  
• Development of a rapid and highly accurate method for 13C tracer-based metabolomics and its application on a hydrogenotrophic methanogen.

  Yuto Fukuyama; Shigeru Shimamura; Sanae Sakai; Yuta Michimori; Tomomi Sumida; Yoshito Chikaraishi; Haruyuki Atomi; Takuro Nunoura

  ISME communications, Jan. 2024

  
• Biochemical and genetic examination of two aminotransferases from the hyperthermophilic archaeon Thermococcus kodakarensis.

  Yu Su; Yuta Michimori; Haruyuki Atomi

  Frontiers in microbiology, 2023

  

External funds: Kakenhi

• Elucidation and biosynthesis pathway of an archaeal C1-carrier

  Grant-in-Aid for Early-Career Scientists

  Basic Section 38020:Applied microbiology-related

  Kyoto University

  道盛 裕太

  From 01 Apr. 2026, To 31 Mar. 2029, Granted

  アーキア;代謝;ゲノム

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-26K17983/