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Ophinni, Youdiil

The HAKUBI Center for Advanced Research Program-Specific Assistant Professor

Ophinni, Youdiil
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    Last Updated :2025/04/23

    Basic Information

    Concurrent Affiliation

    • Center for Southeast Asian Studies (CSEAS), Division of Environmental Coexistence, Program-specific Assistant Professor

    Email Address

    • Email Address

      ophinni.youdiil.5dkyoto-u.ac.jp

    Professional Memberships

    • From Oct. 2011, To Present
      Indonesian Physician Association
    • From May 2019, To Apr. 2020
      International AIDS Society
    • From Oct. 2017, To Sep. 2018
      European AIDS Clinical Society
    • From Jul. 2012, To Sep. 2014
      Indonesian Association of Physicians in AIDS Care
    • From Aug. 2024, To Present
      The Japanese Society for Virology
    • From Nov. 2018, To Oct. 2019
      The Molecular Biology Society of Japan
    • From Oct. 2016, To Sep. 2017
      The Japanese Society for Virology

    Academic Degree

    • 09 Aug. 2011
      Medical Doctor (M.D.) (Universitas Indonesia)
    • 25 Sep. 2018
      Doctor of Philosophy (Ph.D., Medical Science) (Kobe University)

    Academic Resume (Graduate Schools)

    • Kobe University, Graduate School of Medicine, Medical Science, Graduated

    Academic Resume (Undergraduate School/Majors)

    • Universitas Indonesia, Faculty of Medicine, Graduated

    High School

    • High School

      SMA Negeri 8 Jakarta

    Research History

    • From Sep. 2011, To Sep. 2014
      Cipto Mangunkusumo Hospital of University of Indonesia, HIV Integrated Service Unit, Research Physician
    • From Sep. 2012, To Jul. 2014
      Sukapura Islamic Hospital, Physician
    • From Sep. 2011, To Aug. 2012
      Cikijing Puskesmas (community health center), General Practitioner
    • From Sep. 2011, To Aug. 2012
      Majalengka District Hospital, General Practitioner
    • From Apr. 2024, To Present
      Kobe University, Graduate School of Medicine Center for Infectious Diseases, Visiting Researcher
    • From Apr. 2024, To Present
      Osaka University, WPI Immunology Frontier Research Center, Visiting Researcher
    • From Apr. 2024, To Present
      Kyoto University, The Hakubi Center for Advanced Studies, Program-specific Assistant Professor
    • From May 2023, To Mar. 2024
      Kyoto University, Center for Southeast Asian Studies, Affiliated Assistant Professor
    • From May 2023, To Oct. 2023
      Center for Infectious Diseases, Graduate School of Medicine, Kobe University, Division of Clinical Virology, Program-specific Assistant Professor
    • From Aug. 2021, To Mar. 2023
      Immunology Frontier Research Center (IFReC) Osaka University, Host Defense, Specially Appointed Researcher
    • From Apr. 2020, To Jul. 2021
      Ragon Institute of MGH, MIT and Harvard, T Cell Immunotherapy (Allen Lab), Research Fellow
    • From Oct. 2018, To Mar. 2020
      Kobe University Graduate School of Medicine, Division of Molecular Medicine & Medical Genetics, Department of Pathology, Postdoctoral Researcher

    ID,URL

    researchmap URL

    list
      Last Updated :2025/04/23

      Research

      Research Interests

      • Infectious disease
      • Virology
      • Metaviromics
      • HIV/AIDS
      • Zoonosis/anthroponosis
      • Vaccinology
      • Harm reduction
      • Substance use
      • Indonesia area studies
      • Area genomics
      • Metagenomics
      • Gene editing
      • CRISPR-Cas
      • Viral vector
      • Innate immunity
      • T cell immunity
      • Flowcytometry

      Research Areas

      • Life sciences, Infectious disease
      • Life sciences, Virology
      • Life sciences, Genomics
      • Other, Other, Area study
      • Life sciences, Healthcare management, medical sociology
      • Life sciences, Immunology
      • Life sciences, Molecular biology
      • Life sciences, Biomedical engineering

      Papers

      • High frequency CCR5 editing in human hematopoietic stem progenitor cells protects xenograft mice from HIV infection
        Daniel T. Claiborne; Zachary Detwiler; Steffen S. Docken; Todd D. Borland; Deborah Cromer; Amanda Simkhovich; Youdiil Ophinni; Ken Okawa; Timothy Bateson; Tao Chen; Wesley Hudson; Radiana Trifonova; Miles P. Davenport; Tony W. Ho; Christian L. Boutwell; Todd M. Allen
        Nature Communications, 07 Jan. 2025, Peer-reviewed
      • The role of heat shock proteins in HIV-1 pathogenesis: a systematic review investigating HSPs-HIV-1 correlations and interactions
        Chyntia Tresna Nastiti; Noer Halimatus Syakdiyah; R.M. Firzha Hawari; Youdiil Ophinni; Ni Luh Ayu Megasari
        PeerJ, 19 Sep. 2024, Peer-reviewed
      • Correction to: Suicidal ideation, psychopathology and associated factors among HIV-infected adults in Indonesia (BMC Psychiatry, (2020), 20, 1, (255), 10.1186/s12888-020-02666-1)
        Youdiil Ophinni; Adrian; Kristiana Siste; Martina Wiwie; Gina Anindyajati; Enjeline Hanafi; Reza Damayanti; Yoshitake Hayashi
        BMC Psychiatry, 01 Dec. 2020
      • Relapse prevention group therapy in Indonesia involving peers via videoconferencing for substance use disorder: development and feasibility study
        Kristiana Siste; Youdiil Ophinni; Enjeline Hanafi; Chika Yamada; Reza Novalino; Albert P Limawan; Evania Beatrice; Vania Rafelia; Peter Alison; Toshihiko Matsumoto; Ryota Sakamoto
        JMIR Formative Research, 18 Jun. 2024, Peer-reviewed, Lead author
      • Efficacy, immunogenicity, and safety of COVID-19 vaccines in patients with autoimmune diseases: a systematic review and meta-analysis
        Alvina Widhani; Anshari Saifuddin Hasibuan; Retia Rismawati; Suzy Maria; Sukamto Koesnoe; Muhammad Ikrar Hermanadi; Youdiil Ophinni; Chika Yamada; Kuntjoro Harimurti; Aldean Nadhyia Laela Sari; Evy Yunihastuti; Samsuridjal Djauzi
        Vaccines, 04 Sep. 2023, Peer-reviewed
      • Monkeypox: immune response, vaccination and preventive efforts
        Youdiil Ophinni; Andri Frediansyah; Salin Sirinam; Dewi Megawati; Ana M. Stoian; Seyi S. Enitan; Richard Y. Akele; Ranjit Sah; Krit Pongpirul; Ziad Abdeen; Sevda Aghayeva; Aamer Ikram; Yohannes Kebede; Uwe Wollina; Kannan Subbaram; Ai Koyanagi; Abdulwahed Al Serouri; H. Blaise Nguendo-Yongsi; Jeffrey Edwards; Dina E. Sallam; Yousef Khader; Sandro G. Viveiros-Rosa; Ziad A. Memish; Mehrdad Amir-Behghadami; Sandro Vento; Marius Rademaker; Malik Sallam
        Narra J, 22 Oct. 2022, Peer-reviewed, Invited, Lead author
      • Monkeypox: a comprehensive review
        Harapan, H.; Ophinni, Y.; Megawati, D.; Frediansyah, A.; Mamada, S.S.; Salampe, M.; Bin Emran, T.; Winardi, W.; Fathima, R.; Sirinam, S.; Sittikul, P.; Stoian, A.M.; Nainu, F.; Sallam, M.
        Viruses, 29 Sep. 2022, Peer-reviewed
      • Perceived risk of infection and death from COVID-19 among community members of low- and middle-income countries: a cross-sectional study
        Mahir Gachabayov; Khan Sharun; Daniel M. Felsenreich; Firzan Nainu; Samsul Anwar; Amanda Yufika; Youdiil Ophinni; Chika Yamada; Marhami Fahriani; Milda Husnah; Rawan Raad; Namareg ME. Khiri; Rashed YA. Abdalla; Rashed Y. Adam; Mohajer IH. Ismaeil; Asma Y. Ismail; Wajdi Kacem; Zeineb Teyeb; Khaoula Aloui; Montacer Hafsi; Manel Ferjani; Nasrine Ben Hadj Dahman; Dalia A. Deeb; Dina Emad; Kirellos Said Abbas; Fatma A. Monib; Farah S. Sami; Subramaniam Ramanarayanan; Suhrud Panchawagh; Sunil Anandu; Md Ariful Haque; Lirane ED. Ferreto; María FC. Briones; Rocío BI. Morales; Sebastián Lazcano-Díaz; José TO. Aburto; Jorge ET. Rojas; Emmanuel O. Balogun; Hendrix I. Kusuma; Cut Meurah Yeni; Niken Asri Utami; Seyi S. Enitan; Akele R. Yomi; Abiodun Durosinmi; Esther N. Adejumo; Eyiuche D. Ezigbo; Elham Babadi; Edris Kakemam; Irfan Ullah; Najma I. Malik; Francesco Rosiello; Talha B. Emran; Eva Imelda; Guilherme W. Wendt; Morteza Arab-Zozani; Kuldeep Dhama; Mudatsir Mudatsir; Harapan Harapan
        F1000Research, 07 Sep. 2022, Peer-reviewed
      • Molnupiravir: a lethal mutagenic drug against rapidly mutating severe acute respiratory syndrome coronavirus 2—A narrative review
        Masyeni, S.; Iqhrammullah, M.; Frediansyah, A.; Nainu, F.; Tallei, T.; Emran, T.B.; Ophinni, Y.; Dhama, K.; Harapan, H.
        Journal of Medical Virology, 21 Mar. 2022, Peer-reviewed
      • Psychotherapy co-provision by peers and healthcare workers for substance use disorders in Indonesia
        Chika Yamada; Youdiil Ophinni
        Japan-ASEAN Transdisciplinary Studies Working Paper Series, Mar. 2022, Peer-reviewed
      • Beliefs on social distancing and face mask practices during the COVID-19 pandemic in low- and middle-income countries: a cross-sectional study [version 1; peer review: 1 approved, 1 approved with reservations]
        Harapan Harapan; Amanda Yufika; Samsul Anwar; Youdiil Ophinni; Chika Yamada; Khan Sharun; Mahir Gachabayov; Marhami Fahriani; Milda Husnah; Rawan Raad; Namareg ME. Khiri; Rashed YA Abdalla; Wajdi Kacem; Zeineb Teyeb; Khaoula Aloui; Manel Ferjani; Dalia A. Deeb; Dina Emad; Kirellos S Abbas; Suhrud Panchawagh; Sunil Anandu; Md Ariful Haque; Lirane ED. Ferreto; María FC. Briones; Rocío BI. Morales; Sebastián Lazcano-Díaz; Abiodun Durosinmi; Esther N. Adejumo; Elham Babadi; Edris Kakemam; Irfan Ullah; Najma I. Malik; Francesco Rosiello; Talha B. Emran; Firzan Nainu; Guilherme W. Wendt; Morteza Arab-Zozani; Abram L. Wagner; Mudatsir Mudatsir
        F1000Research, 17 Feb. 2022, Peer-reviewed
      • Global prevalence of persistent neuromuscular symptoms and the possible pathomechanisms in COVID-19 recovered individuals: A systematic review and meta-analysis
        Jhonny K. Fajar; Muhammad Ilmawan; Sukamto Mamada; Endang Mutiawati; Milda Husnah; Hanifah Yusuf; Firzan Nainu; Salin Sirinam; Synat Keam; Youdiil Ophinni; Francesco Rosiello; Marhami Fahriani; Sandro GV. Rosa
        Narra J, 01 Dec. 2021
      • Relapse prevention group therapy via video-conferencing for substance use disorder: protocol for a multicentre randomised controlled trial in Indonesia
        Chika Yamada; Kristiana Siste; Enjeline Hanafi; Youdiil Ophinni; Evania Beatrice; Vania Rafelia; Peter Alison; Albert Limawan; Tomohiro Shinozaki; Toshihiko Matsumoto; Ryota Sakamoto
        BMJ Open, Sep. 2021, Peer-reviewed, Lead author
      • Persistence of long COVID symptoms in COVID-19 survivors worldwide and its potential pathogenesis: a systematic review and meta-analysis
        Marhami Fahriani; Muhammad Ilmawan; Jonny K. Fajar; Helnida A. Maliga; Andri Frediansyah; Sri Masyeni; Hanifah Yusuf; Firzan Nainu; Francesco Rosiello; Salin Sirinam; Synat Keam; Youdiil Ophinni
        Narra J, 01 Aug. 2021, Peer-reviewed
      • Global prevalence of prolonged gastrointestinal symptoms in COVID-19 survivors and potential pathogenesis: a systematic review and meta-analysis
        Fauzi Yusuf; Marhami Fahriani; Sukamto S. Mamada; Andri Frediansyah; Azzaki Abubakar; Desi Maghfirah; Jonny Karunia Fajar; Helnida Anggun Maliga; Muhammad Ilmawan; Talha Bin Emran; Youdiil Ophinni; Meutia Rizki Innayah; Sri Masyeni; Abdulla Salem Bin Ghouth; Hanifah Yusuf; Kuldeep Dhama; Firzan Nainu; Harapan Harapan
        F1000Research, 19 Apr. 2021, Peer-reviewed
      • Anosmia and dysgeusia in SARS-CoV-2 infection: incidence and effects on COVID-19 severity and mortality, and the possible pathobiology mechanisms - a systematic review and meta-analysis
        Endang Mutiawati; Marhami Fahriani; Sukamto S. Mamada; Jonny Karunia Fajar; Andri Frediansyah; Helnida Anggun Maliga; Muhammad Ilmawan; Talha Bin Emran; Youdiil Ophinni; Ichsan Ichsan; Nasrul Musadir; Ali A. Rabaan; Kuldeep Dhama; Syahrul Syahrul; Firzan Nainu; Harapan Harapan
        F1000Research, 21 Jan. 2021, Peer-reviewed
      • COVID-19 vaccines: current status and implication for use in Indonesia
        Youdiil Ophinni
        Acta Medica Indonesiana, 30 Dec. 2020, Peer-reviewed, Invited, Lead author, Corresponding author
      • Suicidal ideation, psychopathology and associated factors among HIV-infected adults in Indonesia
        Youdiil Ophinni; Adrian; Kristiana Siste; Martina Wiwie; Gina Anindyajati; Enjeline Hanafi; Reza Damayanti; Yoshitake Hayashi
        BMC Psychiatry, Dec. 2020, Peer-reviewed, Lead author
      • Multiplexed tat-targeting CRISPR-Cas9 protects T cells from acute HIV-1 infection with inhibition of viral escape
        Youdiil Ophinni; Sayaka Miki; Yoshitake Hayashi; Masanori Kameoka
        Viruses, 28 Oct. 2020, Peer-reviewed, Lead author, Corresponding author
      • Characterization of HIV-1 CRF01_AE env genes derived from recently infected Indonesian individuals
        Maho Sasaki; Tomohiro Kotaki; Siti Qamariyah Khairunisa; Shingo Tachibana; Youdiil Ophinni; Yoshitake Hayashi; Nasronudin; Masanori Kameoka
        AIDS Research and Human Retroviruses, 01 Mar. 2020, Peer-reviewed
      • piRNA-guided CRISPR-like immunity in eukaryotes
        Ophinni, Y.; Palatini, U.; Hayashi, Y.; Parrish, N.F.
        Trends in Immunology, 31 Oct. 2019, Peer-reviewed, Lead author
      • Frailty among HIV-1 infected adults under antiretroviral therapy in Indonesia
        Wulunggono Wulunggono; Evy Yunihastuti; Hamzah Shatri; Edy Rizal Wahyudi; Youdiil Ophinni
        Current HIV Research, 23 Oct. 2019, Peer-reviewed
      • CRISPR/Cas9 targeting HIV-1 regulatory genes inactivates latent proviral DNA and prevents new infection in T cell culture with inhibition of viral escape
        Y. Ophinni; M. Inoue; T. Kotaki; M. Kameoka; Y. Hayashi
        Journal of Virus Eradication, Jul. 2019, Peer-reviewed, Lead author
      • CRISPR/Cas9 system targeting regulatory genes of HIV-1 inhibits viral replication in infected T-cell cultures
        Youdiil Ophinni; Mari Inoue; Tomohiro Kotaki; Masanori Kameoka
        Scientific Reports, Dec. 2018, Peer-reviewed, Lead author
      • A 2-4-amino acid deletion in the V5 region of HIV-1 Env gp120 confers viral resistance to the broadly neutralizing human monoclonal antibody, VRC01
        Youdiil Ophinni
        AIDS Research and Human Retroviruses, 17 Oct. 2017, Peer-reviewed

      Misc.

      • Cryptographic footprints of life: deciphering organismal encounters through area genomics
        Youdiil Ophinni
        CSEAS Newsletter, 11 Sep. 2024, Peer-reviewed, Invited, Lead author
      • Identification of human-to-primates viral spillover in Southeast Asia
        Youdiil Ophinni; Chika Yamada; Michiko Fujisawa; Ryota Sakamoto; Hidayat; Wataru Yamazaki
        FY2023 Report of Research Unit for Realization of Sustainable Society Kyoto University, Mar. 2024, Lead author
      • Development of wastewater-based epidemiology fo psychoactive substance in Japan
        Chika Yamada; Haruka Takeuchi; Ryota Sakamoto; Youdiil Ophinni; Toshihiko Matsumoto
        FY2022 Report of Research Unit for Realization of Sustainable Society Kyoto University, Mar. 2023
      • Strategies for sustainable social inclusion of people who use drugs in Southeast Asia
        Chika Yamada; Ryota Sakamoto; Kristiana Siste; Enjeline Hanafi; Youdiil Ophinni; Tomohiro Shinozaki; Toshihiko Matsumoto
        FY2021 Report of Research Unit for Realization of Sustainable Society Kyoto University, Mar. 2022
      • Feasibility of tele-delivered cognitive behavioral therapy for substance use disorders
        Chika Yamada; Ryota Sakamoto; Kristiana Siste; Enjeline Hanafi; Youdiil Ophinni; Tomohiro Shinozaki; Toshihiko Matsumoto
        FY2020 Report of Research Unit for Realization of Sustainable Society Kyoto University, Mar. 2021
      • SARS-CoV-2 mutation and dissemination in Southeast Asia: implications for a prospective vaccine
        Youdiil Ophinni
        CSEAS Newsletter, 05 Jun. 2020, Peer-reviewed, Invited, Lead author

      Presentations

      • Identification of human-to-primates viral spillover in Indonesia
        Youdiil Ophinni
        Research meeting of the Center for the Evolutionary Origins of Human Behavior, 20 Dec. 2024, Invited
      • CRISPR-Cas to cure HIV infection: Bridging basic science and clinical application
        Youdiil Ophinni
        Guest Lecture for students and faculty in the Faculty of Pharmacy, Hasanuddin University, 05 Dec. 2024, Invited
      • Gene editing to cure HIV infection: Bridging basic science, translational research, and clinical application
        Youdiil Ophinni
        International Symposium: Interdisciplinary Perspectives in Biomedical Research, 19 Nov. 2024, Sam Ratulangi University, Invited
      • Advancing HIV-1 cure using CRISPR-Cas9: From cell culture to human stem cells and humanized mice
        Youdiil Ophinni; Todd Mackenzie Allen; Masanori Kameoka
        The 71st Annual Meeting of the Japanese Society for Virology, 05 Nov. 2024, The Japanese Society for Virology
      • Applications of CRISPR-Cas systems in infectious disease management
        Youdiil Ophinni
        Scientific Health Seminar of Clinical Laboratory Experts (SIKLIK), 02 Nov. 2024, Airlangga University, Invited
      • Sense of belonging in substance use disorder
        Youdiil Ophinni
        Guest Lecture of Students in Atma Jaya Catholic University of Indonesia, School of Medicine and Health Sciences, 19 Aug. 2024, Invited
      • Efektivitas terapi perilaku kognitif online dalam tatalaksana pasien dengan gangguan penyalahgunaan zat di Indonesia: sebuah uji randomisasi klinis (Effectiveness of online cognitive behavioral therapy in the management of patients with substance abuse disorders in Indonesia: a randomized clinical trial)
        Siste, K; Yamada, C; Hanafi, E; Ophinni, Y; Matsumoto, T; Sakamoto, R; Sieto, N. L; Beatrice, E; Rafelia, V; Alison, P; Siswidiani, L. P; Putri, I. K; Adrian; Sari, M. P; Harianja, F
        2022 National Congress of Indonesian Psychiatrists Association, 25 Nov. 2022
      • Indo-DARPP: Psikoterapi untuk gangguan penggunaan zat berbasis komunitas dan pengaplikasian daring pada pandemi COVID-19 (Indo-DARPP: Community-based psychotherapy for substance use disorders and online applications during the COVID-19 pandemic)
        Chika Yamada; Youdiil Ophinni
        Technical Working Meeting of the Rehabilitation Division, National Narcotics Board of Indonesia, 30 Aug. 2022
      • Advancing HIV/AIDS cure using CRISPR-Cas9: From cell culture to humanized mice and human stem cells
        Youdiil Ophinni
        Guest Lecture of Postgraduate Students in Universitas Indonesia, Faculty of Medicine, Department of Microbiology & Clinical Microbiology, 26 Jun. 2024, Invited
      • One Health approach to infectious diseases: Viral metagenomic analyses from Indonesia
        Youdiil Ophinni
        Research Units Exploring Future Horizons Report Meeting, 08 Jun. 2024, Kyoto University Research Coordination Alliance, Invited
      • Urban living in Indonesia in the era of climate crisis
        Youdiil Ophinni; Chika Yamada
        Airlangga University Postgraduate Summer School, 04 Jun. 2024, Airlangga University, Invited
      • Reimagining harm reduction through its genealogy in Indonesia
        Chika Yamada; Youdiil Ophinni
        1st International Conference on Drug Research and Policy, 14 May 2024
      • Gene editing to cure chronic viral infections: From in vitro to in vivo
        Youdiil Ophinni
        Guest Lecture of Postgraduate Students in Airlangga University, 14 Sep. 2023, Airlangga University, Invited
      • Eradicating HIV/AIDS with CRISPR-Cas: From in vitro to in vivo
        Youdiil Ophinni
        2023 Indonesian Diaspora Scientific Forum (FIDI): "Towards 2045, Unifying Indonesia's Scientific Excellence for an Advanced and Sustainable Nation", 25 Aug. 2023, Indonesia National Research and Innovation Agency, Invited
      • CRISPR-Cas9 to cure viral infection
        Youdiil Ophinni
        MSHG-InaSHG Joint Live Webinar, 24 Jul. 2022, Invited
      • Gene editing as a drug: CRISPR-Cas9 to cure viral infection
        Youdiil Ophinni
        4th International Conference on Bioinformatics, Biotechnology, and Biomedical Engineering (BioMIC) 2021, 06 Oct. 2021, Universitas Gadjah Mada, Invited
      • Evidence of telemedicine from a developing country during the COVID-19 pandemic: A virtual relapse prevention program among a clinical sample of substance use disorder patients
        Hanafi, E; Siste, K; Yamada, C; Ophinni, Y; Sakamoto, R; Limawan, A; Shinozaki, T; Matsumoto, T
        National Institute of Drug Abuse (NIDA) International Forum 2021, 23 Jun. 2021, National Institute of Drug Abuse (NIDA)
      • Cutting the virus: gene editing to cure chronic viral infection
        Youdiil Ophinni
        Guest Lecture Series of Doctoral Program in Medical Sciences Faculty of Medicine Universitas Indonesia, 03 Nov. 2020, Universitas Indonesia, Invited
      • Harnessing CRISPR/Cas9 gene editing to cure HIV-1 infection
        Youdiil Ophinni
        International Course for Health Sciences, 12 Sep. 2019, Kobe University Graduate School of Health Sciences, Invited
      • CRISPR/Cas9 system targeting HIV-1 regulatory genes prevents new infection in T cell culture with inhibition of viral escape
        Ophinni Y; Inoue M; Kotaki T; Kameoka M; Hayashi Y
        10th International AIDS Society Conference on HIV Science, 24 Jul. 2019, International AIDS Society
      • CRISPR/Cas9 system targeting regulatory genes of HIV-1 inhibits viral replication in infected T cell cultures
        Ophinni Y; Inoue M; Kotaki T; Kameoka M; Hayashi Y
        41st Annual Meeting of the Molecular Biology Society of Japan, 29 Nov. 2018, Molecular Biology Society of Japan
      • CRISPR/Cas9 system targeting HIV-1 regulatory genes tat and rev inhibits viral replication in persistently- and latently-infected cells
        Ophinni Y; Inoue M; Kameoka M
        16th European AIDS Conference, 26 Oct. 2017, European AIDS Clinical Society
      • CRISPR/Cas9 system targeting HIV-1 regulatory genes tat and rev successfully inhibits viral replication in persistently infected cells
        Ophinni Y; Inoue M; Kameoka M
        64th Annual Meeting of the Japanese Society for Virology, 25 Oct. 2016
      • CRISPR/Cas9 system targeting regulatory genes tat and rev successfully inhibits HIV-1 replication in persistently-infected cells
        Youdiil Ophinni; Mari Inoue; Norifumi Matake; Ami Matsumoto; Tomohiro Kotaki; Masanori Kameoka
        30th Kinki AIDS Research Society Annual Meeting, 04 Jun. 2016
      • Inactivation of integrated HIV-1 genome by gene editing technique with CRISPR/Cas 9 system
        Youdiil Ophinni
        Teleconference Research Seminar on Infectious Disease and Health Promotion of Kobe University, Airlangga University, and Chiang Mai University, 05 Feb. 2016, Invited
      • Outcomes of antiretroviral therapy re-initiation after unplanned stopping in patients with HIV infection
        Gebrina M; Putri RF; Wulunggono; Ophinni Y; Yunihastuti E
        8th Jakarta Allergy and Clinical Immunology Network (JACIN) Meeting Symposium, 15 Jun. 2013
      • Changes in renal function associated with tenofovir disoproxil fumarate
        Ophinni Y; Putri RF; Gebrina M; Wulunggono; Yunihastuti E
        8th Jakarta Allergy and Clinical Immunology Network (JACIN) Meeting Symposium, 15 Jun. 2013
      • Association between knowledge and drug adherence in patients with hypertension in West Java in 2012
        Neldy FA; Ophinni Y; Gebrina M; Hasibuan AS; Fitriani KF; Agustina DR; Ferdi; Gaol EL; Iskandar Y; Indrarespati A; Melita; Harris L; Faisha K
        12th Holistic Approaches in Cardiovascular Diseases Symposium (HOPECARDIS), 07 Jun. 2013
      • Prevalence of anemia related to zidovudine as first-line therapy in subjects with HIV/AIDS
        Wulunggono; Fanani RA; Gebrina M; Ophinni Y; Putri RF; Agustina DR; Nugraheni P; Pramudita RA; Nufus H; Yunihastuti E
        Clinical Research Meeting of Indonesian Association of Physicians in AIDS Care (PDPAI): Updates in HIV Medicine, 08 Dec. 2012
      • Body fat composition and distribution among HIV patients with long term antiretroviral therapy
        Ophinni Y; Kusumayanti RR; Nugroho W; Fanani RA; Pramudita RA; Nugraheni P; Agustina DR; Putri RF; Gebrina M; Wulunggono; Setiawan R; Sain A; Siregar NJ; Yunihastuti E
        Clinical Research Meeting of Indonesian Association of Physicians in AIDS Care (PDPAI): Updates in HIV Medicine, 08 Dec. 2012
      • Adherence to antiretroviral post-exposure prophylaxis and subsequent HIV testing among health care workers in Cipto Mangunkusumo hospital
        Pramudita RA; Nugraheni P; Nugroho W; Fanani RA; Ophinni Y; Yunihastuti E
        Annual Scientific Meeting of Internal Medicine of Indonesia, 13 Jul. 2012
      • Emotional and behavioral problems and their association with history of sexual abuse among street children in Central Jakarta, Indonesia
        Pangestu N; Savitri AI; Saidah F; Handoko Y; Siregar NN; Ophinni Y
        National Research Paper Competition of Liga Medika Sains, Indonesia, 24 Jul. 2008

      Books and Other Publications

      • Virus-Infected Cells
        Firzan Nainu; Youdiil Ophinni; Akiko Shiratsuchi; Yoshinobu Nakanishi, Joint work, Apoptosis and phagocytosis as antiviral mechanisms
        Springer Cham, Dec. 2023
      • Adult Immunization Guideline 2022
        Sukamto Koesnoe; Samsuridjal Djauzi; Evy Yunihastuti; Anshari Saifuddin Hasibuan; Youdiil Ophinni, Joint work, New SARS-CoV-2 variants and their influence toward COVID-19 vaccine efficacy; Development of COVID-19 vaccine; Development of HIV vaccine
        Interna Publishing, May 2022, Not refereed
      • Handbook of Social Inclusion, Research and Practices in Health and Social Sciences
        Chika Yamada; Youdiil Ophinni; Hervita Diatri, Joint work, Social Exclusion among People with Mental Health Conditions in Indonesia: The Case of Pasung
        Springer Nature, 11 Dec. 2021, Not refereed
      • Indonesia Drug Addiction Relapse Prevention Program (Indo-DARPP)
        Kristiana Siste; Chika Yamada; Enjeline Hanafi; Ryota Sakamoto; Youdiil Ophinni; Fumi Imamura; Toshihiko Matsumoto, Joint work
        Universitas Indonesia Publishing, Jan. 2021, Not refereed

      Awards

      • 15 May 2024
        最優秀口頭発表賞(ICDR,ICJR,インドネシアアトマジャヤカトリック大学)

      Media Coverage

      • Cryptographic footprints of life: deciphering organismal encounters through area genomics
        Center for Southeast Asian Studies, Kyoto University, 11 Sep. 2024, Internet
      • New staff: Youdiil Ophinni
        Center for Southeast Asian Studies, Kyoto University, 10 Jul. 2024, Internet
      • Review paper on piRNA antiviral immunity
        Kobe University, 28 Nov. 2019, Internet
      • Genome editing method targets AIDS virus
        Kobe University, 18 May 2018, Internet
      • エイズ「2030年終結」挑む [Challenge to end AIDS in 2030]
        Yomiuri Shimbun, Japan, 26 Oct. 2018, Paper
      • CRISPR eradicates latent HIV-1, offering hope of “functional cures”
        Mary Ann Liebert, Inc., GEN News, 21 May 2018, Internet

      External funds: Kakenhi

      • A One-Health metagenomic study of viruses at Indonesia's threatened human-nature interface
        Grant-in-Aid for Early-Career Scientists
        Basic Section 58020:Hygiene and public health-related: including laboratory approach
        Kyoto University
        オフィンニ ユディル
        From 01 Apr. 2024, To 31 Mar. 2026, Granted
        One Health;Metagenome;Viral infection;Zoonosis;Indonesia
      • Interdisciplinary analysis of drug use and its state control in Indonesia
        Grant-in-Aid for Scientific Research (B)
        Basic Section 80010:Area studies-related
        Kyoto University
        山田 千佳
        From 01 Apr. 2022, To 31 Mar. 2027, Granted
        アーカイブ;ハームリダクション;精神作用物質;下水疫学;インドネシア;薬物使用;社会史;統制
      • Generation of HIV-1 resistant T cells from induced pluripotent stem cell using CRISPR/Cas9 system
        Grant-in-Aid for Early-Career Scientists
        Basic Section 54030:Infectious disease medicine-related
        Osaka University;Kobe University
        オフィンニ ユディル
        From 01 Mar. 2021, To 31 Mar. 2023, Granted
        HIV-1;iPSC;CRISPR/Cas9;T cell;Feeder-free;Lentivirus
      • An Interdisciplinary One Health Approach to Inclusive Animal Infectious Disease Control in the Philippines
        Grant-in-Aid for Scientific Research (A)
        Medium-sized Section 4:Geography, cultural anthropology, folklore, and related fields
        Kyoto University
        山崎 渉
        From 01 Apr. 2024, To 31 Mar. 2029, Granted
        ワンヘルス;動物感染症;精神保健;スピルオーバ ー;アフリカ豚熱
      • Interdisciplinary analysis of drug use and its state control in Indonesia
        Grant-in-Aid for Scientific Research (B)
        Basic Section 80010:Area studies-related
        Kyoto University
        山田 千佳
        From 01 Apr. 2022, To 31 Mar. 2027, Granted
        アーカイブ;ハームリダクション;精神作用物質;下水疫学;インドネシア;薬物使用;社会史;統制
      list
        Last Updated :2025/04/23

        Academic, Social Contribution

        Committee Memberships

        • From Jan. 2025, To Present
          Guest Editor, Frontiers in Virology
        • From Apr. 2024, To Present
          Editor, Indonesian Internal Medicine Journal

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