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Nakagawa, Naoki

Graduate School of Medicine, Department of Human Health Sciences Associate Professor

Nakagawa, Naoki
list
    Last Updated :2025/07/24

    Basic Information

    Faculty

    • Faculty of Medicine

    Email Address

    • Email Address

      nakagawa.naoki.3zkyoto-u.ac.jp

    Academic Degree

    • 23 Mar. 2011
      京都大学修士(人間健康科学)
    • 24 Mar. 2014
      京都大学博士(人間健康科学)

    Academic Resume (Undergraduate School/Majors)

    • 京都大学, 医学部人間健康科学科, 卒業

    Research History

    • From Oct. 2024, To Present
      Human Health Sciences, Graduate School of Medicine, Kyoto University, 准教授
    • From Sep. 2018, To Sep. 2024
      National Institute of Genetics, 助教
    • From Apr. 2015, To Aug. 2018
      ノースカロライナ大学, 博士研究員
    • From Apr. 2013, To Mar. 2015
      日本学術振興会 特別研究員

    Profile

    • Profile

      大脳皮質における、神経細胞層の構築と神経回路網の形成を担う分子・細胞メカニズムに興味を持って研究を行っています。

    ID,URL

    researchmap URL

    list
      Last Updated :2025/07/24

      Research

      Research Interests

      • 細胞極性
      • ゴルジ体
      • 神経科学
      • 大脳皮質
      • 神経回路形成
      • 活動依存的発達
      • バレル皮質
      • 樹状突起
      • in vivoイメージング
      • オルガネラ
      • 放射状グリア
      • 神経幹・前駆細胞
      • マウス遺伝学
      • 糖鎖生物学
      • 先天性筋ジストロフィー

      Research Areas

      • Life sciences, Molecular biology
      • Life sciences, Neuroscience - general

      Papers

      • The neuronal Golgi in neural circuit formation and reorganization
        Naoki Nakagawa
        Frontiers in Neural Circuits, 05 Dec. 2024, Peer-reviewed, Lead author, Corresponding author
      • Activity-dependent dendrite patterning in the postnatal barrel cortex
        Naoki Nakagawa; Takuji Iwasato
        Frontiers in Neural Circuits, 17 May 2024, Peer-reviewed, Lead author, Corresponding author
      • Golgi polarity shift instructs dendritic refinement in the neonatal cortex by mediating NMDA receptor signaling.
        Naoki Nakagawa; Takuji Iwasato
        Cell reports, 26 Jul. 2023, Peer-reviewed, Lead author, Corresponding author
      • Memo1-Mediated Tiling of Radial Glial Cells Facilitates Cerebral Cortical Development.
        Nakagawa N; Plestant C; Yabuno-Nakagawa K; Li J; Lee J; Huang CW; Lee A; Krupa O; Adhikari A; Thompson S; Rhynes T; Arevalo V; Stein JL; Molnár Z; Badache A; Anton ES
        Neuron, Sep. 2019, Peer-reviewed, Lead author, Corresponding author
      • APC sets the Wnt tone necessary for cerebral cortical progenitor development
        Naoki Nakagawa; Jingjun Li; Keiko Yabuno-Nakagawa; Tae-Yeon Eom; Martis Cowles; Tavien Mapp; Robin Taylor; E. S. Anton
        GENES & DEVELOPMENT, Aug. 2017, Peer-reviewed, Lead author
      • Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia
        Marco Onorati; Zhen Li; Fuchen Liu; Andre M. M. Sousa; Naoki Nakagawa; Mingfeng Li; Maria Teresa Dell'Anno; Forrest O. Gulden; Sirisha Pochareddy; Andrew T. N. Tebbenkamp; Wenqi Han; Mihovil Pletikos; Tianliuyun Gao; Ying Zhu; Candace Bichsel; Luis Varela; Klara Szigeti-Buck; Steven Lisgo; Yalan Zhang; Anze Testen; Xiao-Bing Gao; Jernej Mlakar; Mara Popovic; Marie Flamand; Stephen M. Strittmatter; Leonard K. Kaczmarek; E. S. Anton; Tamas L. Horvath; Brett D. Lindenbach; Nenad Sestan
        CELL REPORTS, Sep. 2016, Peer-reviewed
      • [Dystroglycan glycosylation: structure, synthetic pathway, and in vivo role in the brain development].
        Naoki Nakagawa; Shogo Oka
        Seikagaku. The Journal of Japanese Biochemical Society, Aug. 2016, Peer-reviewed, Lead author
      • Ectopic clustering of Cajal-Retzius and subplate cells is an initial pathological feature in Pomgnt2-knockout mice, a model of dystroglycanopathy.
        Naoki Nakagawa; Hirokazu Yagi; Koichi Kato; Hiromu Takematsu; Shogo Oka
        Scientific reports, 10 Jun. 2015, Peer-reviewed, Lead author
      • Major glycan structure underlying expression of the Lewis X epitope in the developing brain is O-mannose-linked glycans on phosphacan/RPTP beta
        Shohei Yaji; Hiroshi Manya; Naoki Nakagawa; Hiromu Takematsu; Tamao Endo; Reiji Kannagi; Toru Yoshihara; Masahide Asano; Shogo Oka
        GLYCOBIOLOGY, Apr. 2015, Peer-reviewed
      • HNK-1 Glyco-Epitope: Complex machinery for biosynthesis
        Naoki Nakagawa; Shogo Oka
        Glycoscience: Biology and Medicine, 01 Jan. 2015, Peer-reviewed, Lead author
      • AGO61-dependent GlcNAc modification primes the formation of functional glycans on α-dystroglycan.
        Hirokazu Yagi; Naoki Nakagawa; Takuya Saito; Hiroshi Kiyonari; Takaya Abe; Tatsushi Toda; Sz-Wei Wu; Kay-Hooi Khoo; Shogo Oka; Koichi Kato
        Scientific reports, 21 Nov. 2013, Peer-reviewed, Lead author
      • HNK-1 sulfotransferase-dependent sulfation regulating laminin-binding glycans occurs in the post-phosphoryl moiety on alpha-dystroglycan
        Naoki Nakagawa; Hiromu Takematsu; Shogo Oka
        GLYCOBIOLOGY, Sep. 2013, Peer-reviewed, Lead author
      • Human Natural Killer-1 Sulfotransferase (HNK-1ST)-induced Sulfate Transfer Regulates Laminin-binding Glycans on alpha-Dystroglycan
        Naoki Nakagawa; Hiroshi Manya; Tatsushi Toda; Tamao Endo; Shogo Oka
        JOURNAL OF BIOLOGICAL CHEMISTRY, Aug. 2012, Peer-reviewed, Lead author
      • Sulfation of glucuronic acid in the linkage tetrasaccharide by HNK-1 sulfotransferase is an inhibitory signal for the expression of a chondroitin sulfate chain on thrombomodulin
        Naoki Nakagawa; Tomomi Izumikawa; Hiroshi Kitagawa; Shogo Oka
        BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Nov. 2011, Peer-reviewed, Lead author
      • Specific Enzyme Complex of beta-1,4-Galactosyltransferase-II and Glucuronyltransferase-P Facilitates Biosynthesis of N-linked Human Natural Killer-1 (HNK-1) Carbohydrate
        Tetsuya Kouno; Yasuhiko Kizuka; Naoki Nakagawa; Toru Yoshihara; Masahide Asano; Shogo Oka
        JOURNAL OF BIOLOGICAL CHEMISTRY, Sep. 2011, Peer-reviewed

      Misc.

      • POMGNT1とB3GALNT2は協同的にalpha-ジストログリカン上の部位特異的なリガンド結合糖鎖の発現を制御する
        東 良柄; 中川 直樹; 竹松 弘; 岡 昌吾
        日本生化学会大会・日本分子生物学会年会合同大会講演要旨集, Dec. 2015
      • Molecular mechanisms underlying the formation of laminin-binding glycans displayed on alpha-dystroglycan
        Hirokazu Yagi; Naoki Nakagawa; Shogo Oka; Koichi Kato
        GLYCOBIOLOGY, Nov. 2014
      • Requirement of acidic amino acids in the glucuronyltransferase-P (GlcAT-P) flexible loop for its enzyme activity
        Yasuhiko Kizuka; Naoki Nakagawa; Ippei Morita; Shogo Oka
        Glycans: Biochemistry, Characterization and Applications, 01 Feb. 2012

      Presentations

      • 神経回路再編成を駆動する生後発達期神経細胞のゴルジ体極性シフト
        中川直樹
        第4回 日本神経化学会 若手KYOUEN, 15 Feb. 2025, Invited
      • Golgi polarity shift instructs neuronal circuit reorganization in the neonatal cerebral cortex
        中川直樹
        第47回日本神経科学大会, 26 Jul. 2024, Invited
      • 神経回路再編成を制御する生後発達期神経細胞のゴルジ体極性シフト
        中川直樹
        第76回日本細胞生物学会大会, 17 Jul. 2024, Invited
      • Golgi polarity shift instructs thalamocortical module formation in the neonatal barrel cortex
        Naoki Nakagawa
        第38回熊本医学・生物科学国際シンポジウム 「機能的脳神経回路システムの構築メカニズム」, 14 Dec. 2023, Invited
      • Golgi apparatus polarity shift facilitates dendritic refinement in the neonatal barrel cortex
        Naoki Nakagawa; Takuji Iwasato
        Development and Plasticity of the Brain, 21 Oct. 2022, Invited
      • 活動依存的なゴルジ体局在変化による大脳皮質神経細胞の樹状突起精緻化
        中川直樹; 岩里琢治
        第45回日本神経科学大会, 02 Jul. 2022
      • ゴルジ体ダイナミクスによる大脳皮質神経細胞の樹状突起精緻化
        中川直樹
        第14回 神経発生討論会, 19 Mar. 2021
      • Spatial remodeling and organelle dynamics of L4 neurons during thalamocortical module formation in the mouse barrel cortex
        中川直樹
        遺伝研研究会「哺乳類脳の機能的神経回路の構築メカニズム」, 12 Dec. 2020, 山本亘彦、河崎洋志、田川義晃、中川直樹、岩里琢治, Invited
      • MEMO1 mediates the tiling of radial glial cells essential for the neocortical layer formation
        中川直樹
        遺伝研研究会「哺乳類脳の機能的神経回路の構築メカニズム」, 21 Dec. 2018

      Awards

      • 26 Mar. 2021
        第14回神経発生討論会若手優秀発表賞

      External funds: Kakenhi

      • 大脳皮質カラムの反応特異性を成立させる発達期の細胞内メカニズム解明
        Grant-in-Aid for Scientific Research (B)
        Basic Section 46010:Neuroscience-general-related
        National Institute of Genetics
        中川 直樹
        From 01 Apr. 2024, To 31 Mar. 2027, Granted
        大脳皮質カラム;神経回路形成;樹状突起;バレル皮質;生後脳発達
      • 分化状態と遺伝子発現の多重プロファイリングによる適応回路構築機構の解読
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (III)
        Kyoto University;National Institute of Genetics
        中川 直樹
        From 01 Apr. 2024, To 31 Mar. 2026, Granted
        神経回路再編;分化不均一性;シングルセルRNA-seq;バレル皮質;生後発達
      • ゴルジ体局在動態から紐解く発達期の臨界期回路再編メカニズム
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (III)
        National Institute of Genetics
        中川 直樹
        From 01 Apr. 2023, To 31 Mar. 2025, Granted
        臨界期;大脳皮質神経回路;樹状突起精緻化;ゴルジ体;細胞極性
      • 分化状態の細胞間格差プロファイリングによる適応回路構築機構の解読
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (III)
        National Institute of Genetics
        中川 直樹
        From 16 Jun. 2022, To 31 Mar. 2024, Granted
        神経回路再編;分化不均一性;シングルセルRNA-seq;バレル皮質;生後発達
      • Visualization of cortical module formation by longitudinal in vivo neuron tracking
        Grant-in-Aid for Early-Career Scientists
        Basic Section 46020:Anatomy and histopathology of nervous system-related
        National Institute of Genetics
        Naoki Nakagawa
        From 01 Apr. 2021, To 31 Mar. 2024, Project Closed
        大脳皮質;神経回路形成;in vivoイメージング;バレル皮質;単一細胞動態追跡
      • オルガネラ動態から紐解く発達期の臨界期回路再編メカニズム
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (III)
        National Institute of Genetics
        中川 直樹
        From 10 Sep. 2021, To 31 Mar. 2023, Project Closed
        大脳皮質神経回路;臨界期;ゴルジ体;樹状突起精緻化;in vivoイメージング
      • Visualization of the spatial remodeling of cortical neurons during postnatal module formation
        Grant-in-Aid for Early-Career Scientists
        Basic Section 46020:Anatomy and histopathology of nervous system-related
        National Institute of Genetics
        Naoki Nakagawa
        From 01 Apr. 2019, To 31 Mar. 2022, Project Closed
        神経科学;神経回路形成;生体イメージング;単一細胞動態追跡;バレル皮質
      list
        Last Updated :2025/07/24

        Education

        Teaching subject(s)

        • From 01 Apr. 2025, To 31 Mar. 2026
          Fundamental Chemical Experiments
          N308, Spring, Institute for Liberal Arts and Sciences, 2
        • From 01 Apr. 2025, To 31 Mar. 2026
          Molecular cell biology training
          8010, Fall, Faculty of Medicine, 1
        • From 01 Apr. 2025, To 31 Mar. 2026
          Biochemistry and Neutrition
          3221, Spring, Faculty of Medicine, 1
        • From 01 Apr. 2025, To 31 Mar. 2026
          Advanced Seminar of Molecular Basic Medical Science
          M427, Fall, Graduate School of Medicine, 2
        • From 01 Apr. 2025, To 31 Mar. 2026
          Advanced Lecture of Molecular Basic Medical Science
          M426, Spring, Graduate School of Medicine, 2
        • From 01 Apr. 2025, To 31 Mar. 2026
          Molecule cellular biology
          8009, Fall, Faculty of Medicine, 2
        • From 01 Apr. 2025, To 31 Mar. 2026
          Advanced Methods in Molecular Basic Medical Science
          M428, Year-long, Graduate School of Medicine, 4
        • From 01 Apr. 2025, To 31 Mar. 2026
          Advanced Seminar of Molecular Basic Medical Science
          D426, Year-long, Graduate School of Medicine, 4
        • From 01 Apr. 2025, To 31 Mar. 2026
          Advanced Lecture of Molecular Basic Medical Science
          D425, Year-long, Graduate School of Medicine, 4

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