The Brain/MINDS Marmoset Connectivity Resource: An open-access platform for cellular-level tracing and tractography in the primate brain
Henrik Skibbe; Muhammad Febrian Rachmadi; Ken Nakae; Carlos Enrique Gutierrez; Junichi Hata; Hiromichi Tsukada; Charissa Poon; Matthias Schlachter; Kenji Doya; Piotr Majka; Marcello G. P. Rosa; Hideyuki Okano; Tetsuo Yamamori; Shin Ishii; Marco Reisert; Akiya Watakabe
PLOS Biology, 29 Jun. 2023
Local and long-distance organization of prefrontal cortex circuits in the marmoset brain.
Akiya Watakabe; Henrik Skibbe; Ken Nakae; Hiroshi Abe; Noritaka Ichinohe; Muhammad Febrian Rachmadi; Jian Wang; Masafumi Takaji; Hiroaki Mizukami; Alexander Woodward; Rui Gong; Junichi Hata; David C Van Essen; Hideyuki Okano; Shin Ishii; Tetsuo Yamamori
Neuron, 09 May 2023
The Brain/MINDS Marmoset Connectivity Atlas: exploring bidirectional tracing and tractography in the same stereotaxic space
Henrik Skibbe; Muhammad Febrian Rachmadi; Ken Nakae; Carlos Enrique Gutierrez; Junichi Hata; Hiromichi Tsukada; Charissa Poon; Kenji Doya; Piotr Majka; Marcello G. P. Rosa; Hideyuki Okano; Tetsuo Yamamori; Shin Ishii; Marco Reisert; Akiya Watakabe
08 Jun. 2022
【AI・機械学習・自動化定量解析】コネクトーム ミクロ・メゾ・マクロレベルの新展開
浦久保 秀俊; 渡我部 昭哉; 中江 健; 石井 信; 銅谷 賢治
解剖学雑誌, Sep. 2022
Tri-view two-photon microscopic image registration and deblurring with convolutional neural networks
IEEE Transactions on Neural Systems and Rehabilitation Engineering, 28 Dec. 2020, Peer-reviewed
Optimization and validation of diffusion MRI-based fiber tracking with neural tracer data as a reference
Carlos Enrique Gutierrez; Henrik Skibbe; Ken Nakae; Hiromichi Tsukada; Jean Lienard; Akiya Watakabe; Junichi Hata; Marco Reisert; Alexander Woodward; Yoko Yamaguchi; Tetsuo Yamamori; Hideyuki Okano; Shin Ishii; Kenji Doya
Scientific Reports, 18 Dec. 2020, Peer-reviewed
Modularized predictive codingbased online motion sysnthesis combining environmental constraints and motion data
Jaepyung Hwang; Shin Ishii; Taesoo Kwon; Shigeyuki Oba
IEEE Access, 06 Nov. 2020, Peer-reviewed
Geometry and the organization principle of spine synapses along a dendrite
Parajuli L. K; Urakubo H; Takahashi-Nakazato A; Ogelman R; Iwasaki H; Koike M; Kwon H B; Ishii S; Oh W. C; Fukazawa Y; Okabe S
eNeuro, 27 Oct. 2020, Peer-reviewed
Signaling models for dopamine-dependent temporal contiguity in striatal synaptic plasticity
Spiking network simulation code for petascale computers
Susanne Kunkel; Maximilian Schmidt; Jochen M. Eppler; Hans E. Plesser; Gen Masumoto; Jun Igarashi; Shin Ishii; Tomoki Fukai; Abigail Morrison; Markus Diesmann; Moritz Helias
Frontiers in Neuroinformatics, 10 Oct. 2014
A critical time window for dopamine actions on the structural plasticity of dendritic spines
S. Yagishita; A. Hayashi-Takagi; G. C. R. Ellis-Davies; H. Urakubo; S. Ishii; H. Kasai
Science, 26 Sep. 2014
Decoding spatial attention by using cortical currents estimated from electroencephalography with near-infrared spectroscopy prior information
A State-Space Modeling Approach for Localization of Focal Current Sources From MEG
M. Fukushima; O. Yamashita; A. Kanemura; S. Ishii; M. Kawato; M. Sato
IEEE Transactions on Biomedical Engineering, Jun. 2012
<大学の研究・動向>確率的画像処理と生命・知性のモデル
石井 信; 大羽 成征; 前田 新一
Cue : 京都大学電気関係教室技術情報誌, Mar. 2012
A unified framework of binary classifiers ensemble for multi-class classification
Takashi Takenouchi; Shin Ishii
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2012, Peer-reviewed
Multi-Cellular Logistics of Collective Cell Migration
Masataka Yamao; Honda Naoki; Shin Ishii
PLoS ONE, 21 Dec. 2011
High‐Speed Multineuron Calcium Imaging Using Nipkow‐Type Confocal Microscopy
Novel risk stratification of patients with neuroblastoma by genomic signature, which is independent of molecular signature
N Tomioka; S Oba; M Ohira; A Misra; J Fridlyand; S Ishii; Y Nakamura; E Isogai; T Hirata; Y Yoshida; S Todo; Y Kaneko; D G Albertson; D Pinkel; B G Feuerstein; A Nakagawara
Oncogene, Jan. 2008
Model-Based Reinforcement Learning for Partially Observable Games with Sampling-Based State Estimation
Hajime Fujita; Shin Ishii
Neural Computation, Nov. 2007
Markov and Semi-Markov Switching of Source Appearances for Nonstationary Independent Component Analysis
Jun-ichiro Hirayama; Shin-ichi Maeda; Shin Ishii
IEEE Transactions on Neural Networks, Sep. 2007
Reinforcement learning for a biped robot based on a CPG-actor-critic method
A model of decision-making with estimation of other agent's internal state and actions
SATOH Yumi; OSHIO Ritz; YOSHIDA Wako; ISHII Shin
IEICE technical report, 15 Jan. 2008
Functional dissociation of hidden state estimation and dynamics identification in prefrontal cortex
MORIMOTO Satoshi; YOSHIDA Wako; ISHII Shin
IEICE technical report, 08 Mar. 2007
Additional Optimaization of Feature Extraction for Pattern Classification by Utilizing Multilayer Perceptron
TONOGAI Norikazu; ISHII Shin; SHIBATA Tomohiro
IEICE technical report, 08 Mar. 2007
Self-organized reinforcement learning based on policy gradient in nonstationary environments
HIEI Yu; MORI Takeshi; ISHII Shin
IEICE technical report, 26 Jun. 2008
Instrument Identification Using Line Spectral Pairs
IHARA Mizuki; MAEDA Shin-ichi; ISHII Shin
IEICE technical report, 09 Mar. 2007
Markov and semi-Markov switching of source appearances for non-stationary independent component analysis
HIRAYAMA Jun-ichiro; MAEDA Shin-ichi; ISHII Shin
IEICE technical report, 07 Mar. 2007
2A1-N-065 Augmenting Robotic Sensory System Utilizing Its User's EMG and Posture Information(Cooperation between Human and Machine 3,Mega-Integration in Robotics and Mechatronics to Assist Our Daily Lives)
Nomura Tomohiro; Shibata Tomohiro; Ishii Shin
ロボティクス・メカトロニクス講演会講演概要集, 09 Jun. 2005
A hierarchical multi-class classification method based on error-correcting output coding
OYAMA Yoshimi; TAKENOUCHI Takashi; ISHII Shin
IEICE technical report, 05 Mar. 2008
A hidden Markov model for human information processing during a POMDP task
OKURA Masanori; YOSHIDA Wako; ISHII Shin
IEICE technical report, 08 Jun. 2006
Assessment of muscle relaxation in piano keying by an index finger based on EMG signals
TAMEI TOMOYA; SHIBATA TOMOHIRO; ISHII SHIN
IPSJ SIG Notes, 05 Aug. 2005
Adaptive Mixing of Proposal Distributions of Hierarchical Particle Filtering and its Application to Real-time Pose Estimation of Rigid Object
BANDO Takashi; SHIBATA Tomohiro; SHIMIZU Mikio; ISHII Shin
IEICE technical report, 15 Mar. 2006
Performance of time series prediction of a visual target in humans
SHIKAUCHI Manabu; ISHII Shin; SHIBATA Tomohiro
IEICE technical report, 04 Oct. 2006
On-line Probabilistic Factorization for Recovering 3D Shape and Motion from Image Streams
BANDO Takashi; SHIBATA Tomohiro; SHIMIZU Mikio; FUKAYA Naoki; ISHII Shin
Proceedings of the ECCV Workshop on Statistical Methods in Multi-Image and Video Processing, 2006, Peer-reviewed
Development of learning support system for piano-keying - relationship between the activity of finger muscles and key release velocities of an expert -
Tamei, T; Shibata, T; Ishii, S
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
Prediction of the aperiodic time series of a visual target by humans
Shikauchi, M; Ishii, S; Shibata, T
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
Reinforcement learning of switching multiple controllers to control a real robot
Tokita, Y; Nakamura, Y; Yoshimoto, J; Ishii, S
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
A Bayesian approach to blind source separation with variable number of sources
Hirayama, J; Maeda, S; Ishii, S
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
Natural policy gradient reinforcement learning method for a looper-like robot
Nakamura, Y; Mori, T; Ishii, S
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
Model-based reinforcement learning for large-scale multi-agent games with sampling-based state estimation
Fujita, H; Ishii, S
Proceedings of the 11th international symposium on Artificial Life and Robotics, 2006, Peer-reviewed
IEICE technical report. Neurocomputing, 12 Mar. 2004
A Solving Method for Markov Decision Processes by Minimizing Variational Free Energy
YOSHIMOTO Junichiro; ISHII Shin
IEICE technical report. Neurocomputing, 12 Mar. 2004
Significance test of clusters in gene expression data
KAWASE Natsuko; OBA Shigeyuki; ISHII Shin
Technical report of IEICE. PRMU, 13 Feb. 2004
強化学習の脳内機構と情動による制御
吉田和子; 石井信
心理学評論, 2004
Acrobot control by learning the switching of multiple controllers
Nishimura, M; Yoshimoto, J; Ishii, S
Proceedings of the Ninth International Symposium on Artificial Life and Robotics, 2004
Switching particle filters for efficient real-time visual tracking
T Bando; T Shibata; K Doya; S Ishii
PROCEEDINGS OF THE 17TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOL 2, 2004, Peer-reviewed
Reinforcement learning for a snake-like robot controlled by a central pattern generator
S Fukunaga; Y Nakamura; K Aso; S Ishii
2004 IEEE CONFERENCE ON ROBOTICS, AUTOMATION AND MECHATRONICS, VOLS 1 AND 2, 2004, Peer-reviewed
Character string extraction from color documents using supervised learning
Ogura, T; Hasegawa, F; Oba, S; Miyazawa, T; Ishii, S
Proceedings of the 2004 International Symposium on Nonlinear Theory and its Applications, 2004, Peer-reviewed
Modeling gene expression dynamics based on a linear dynamical system model
Yukinawa, N; Yoshimoto, J; Oba, S; Ishii, S
Proceedings of the 2004 International Symposium on Nonlinear Theory and its Applications, 2004, Peer-reviewed
The role of short term depression for sustained neural activities in the prefrontal cortex: a simulation study
Igarashi, Y; Sakumura, Y; Ishii, S
Proceedings of the 2004 International Symposium on Nonlinear Theory and its Applications, 2004, Peer-reviewed
Reinforcement learning for a snake-like robot
Fukunaga, S; Nakamura, Y; Aso, K; Ishii, S
Proceedings of the 2004 International Symposium on Nonlinear Theory and its Applications, 2004, Peer-reviewed
An imaging study on human action selection using hierarchical rules
Funakoshi, H; Yoshida, W; Ishii, S
Proceedings of the 3rd International Conference on Development and Learning (ICDL), 2004, Peer-reviewed
A noisy nonlinear independent component analysis
S Ma; S Ishii
MACHINE LEARNING FOR SIGNAL PROCESSING XIV, 2004, Peer-reviewed
Natural policy gradient reinforcement learning for a CPG control of a biped robot
Y Nakamura; T Mori; S Ishii
PARALLEL PROBLEM SOLVING FROM NATURE - PPSN VIII, 2004, Peer-reviewed
Cortical representation learning regulated by acetylcholine
Hirayama, J; Yoshimoto, J; Ishii, S
Proceedings of the Brain Inspired Cognitive Systems, 2004, Peer-reviewed
Switching particle filters for efficient real-time visual tracking
T Bando; T Shibata; K Doya; S Ishii
PROCEEDINGS OF THE 17TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOL 2, 2004, Peer-reviewed
A solving method for MDPs by minimizing variational free energy
J Yoshimoto; S Ishii
2004 IEEE INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS, VOLS 1-4, PROCEEDINGS, 2004, Peer-reviewed
Reinforcement learning for a CPG-driven biped robot
T Mori; Y Nakamura; M Sato; S Ishii
PROCEEDING OF THE NINETEENTH NATIONAL CONFERENCE ON ARTIFICIAL INTELLIGENCE AND THE SIXTEENTH CONFERENCE ON INNOVATIVE APPLICATIONS OF ARTIFICIAL INTELLIGENCE, 2004, Peer-reviewed
A reinforcement learning scheme for a multi-agent card game with Monte Carlo state estimation
Fujita, H; Ishii, S
Proceedings of the International Conference on Computational Intelligence for Modelling Control and Automation, 2004, Peer-reviewed
Application of multivariate autoregressive modeling for analyzing the interaction between EEG and EMG in humans
T Shibata; Y Suhara; T Oga; Y Ueki; T Mima; S Ishii
FRONTIERS IN HUMAN BRAIN TOPOGRAPHY, 2004, Peer-reviewed
Optimization of product code
Maeda, S; Ishii, S
Proceedings of the WSEAS Transactions on Systems, 2004, Peer-reviewed
A probabilistic approach to identify environmental models of mobile robots
Kanemoto, K; Yoshimoto, J; Ishii, S
Proceedings of the 9th International Symposium on Artificial Life and Robotics, 2004, Peer-reviewed
Resonance of a stochastic spiking neuron mimicking the Hodgkin-Huxley model
Amemori, K.-I.; Ishii, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2001, Peer-reviewed
Gaussian process approach to stochastic spiking neurons with reset
Amemori, K.-I.; Ishii, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2001, Peer-reviewed
Unsupervised learning of temporal sequence coded by small interval differences
Amemori Kenichi; Ishii Shin
IEICE technical report. Neurocomputing, Jul. 1998
オンラインEMアルゴリズムによる動的な関数近似
石井信; 佐藤雅昭
電子情報通信学会技術研究報告. NLP, 非線形問題, 06 Feb. 1998
Unsupervised learning for sub-millisecond temporal coded sequence
Amemori, K; Ishii, S
Proceedings of the JCIS ’98, 1998, Peer-reviewed
Strategy acquisition for the game "Othello" based on reinforcement learning
T Yoshioka; S Ishii; M Ito
ICONIP'98: THE FIFTH INTERNATIONAL CONFERENCE ON NEURAL INFORMATION PROCESSING JOINTLY WITH JNNS'98: THE 1998 ANNUAL CONFERENCE OF THE JAPANESE NEURAL NETWORK SOCIETY - PROCEEDINGS, VOLS 1-3, 1998, Peer-reviewed
Self-organizing network learning of sub-millisecond temporal coded information
K Amemori; S Ishii
ICONIP'98: THE FIFTH INTERNATIONAL CONFERENCE ON NEURAL INFORMATION PROCESSING JOINTLY WITH JNNS'98: THE 1998 ANNUAL CONFERENCE OF THE JAPANESE NEURAL NETWORK SOCIETY - PROCEEDINGS, VOLS 1-3, 1998, Peer-reviewed
On-line EM algorithm for mixture of local experts
M Sato; S Ishii
ICONIP'98: THE FIFTH INTERNATIONAL CONFERENCE ON NEURAL INFORMATION PROCESSING JOINTLY WITH JNNS'98: THE 1998 ANNUAL CONFERENCE OF THE JAPANESE NEURAL NETWORK SOCIETY - PROCEEDINGS, VOLS 1-3, 1998, Peer-reviewed
Deterministic annealing and chaotic annealing in a neural approach to quadratic assignment problem
Ishii, S
Proceedings of the Methodologies for the Conception, Design and Application of Soft Computing, 1998, Peer-reviewed
On-line EM algorithm and reinforcement learning
Ishii, S; Sato, M
Proceedings of the ICANN 98, 1998, Peer-reviewed
On-line EM algorithm and reconstruction of chaotic dynamics
S Ishii; M Sato
NEURAL NETWORKS FOR SIGNAL PROCESSING VIII, 1998, Peer-reviewed
Chaotic optimization and linear transformation
Niitsuma, H; Ishii, S; Ito, M
Proceedings of the 1997 International Symposium on Nonlinear Theory and Its Applications, 1997, Peer-reviewed
Neural approaches to quadratic assignment problems
Ishii, S
Proceedings of the 2nd International Conference on Computational Intelligence and Neuroscience, 1997, Peer-reviewed
Parametrically coupled chaotic elements as associative memory
Ishii, S; Sato, M
Proceedings of the 1996 International Symposium on Nonlinear Theory and Its Applications, 1996, Peer-reviewed
Kickoff Symposium: Research and Educaion Platform for Innovative Research on Dynamic Living Systems Based on Multi-dimensional Quantitative Imaging and Mathematical Modeling, May 2013
ネットワーク型ブレイン・マシン・インターフェースと一般生活環境への応用可能性
石井信
第28回低消費電力・高速LSI 技術懇談会, Mar. 2013, Invited
Network-based BMI: toward brain machine interface in real environments
Ishii, S
IPAM workshop on Multimodal Neuroimaging, Mar. 2013, Invited