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Fujimoto, Kazuya

Graduate School of Engineering, Division of Micro Engineering Assistant Professor

Fujimoto, Kazuya
list
    Last Updated :2024/04/23

    Basic Information

    Faculty

    • Faculty of Engineering

    Professional Memberships

    • To Present
      Society for Chemistry and Micro-Nano Systems
    • From Apr. 2016, To Present
      一般社団法人 日本生物物理学会
    • From Apr. 2013, To Present
      Institute of Electrical Engineers of Japan

    Academic Degree

    • 修士(工学)(京都大学)
    • 博士(工学)(京都大学)

    Academic Resume (Graduate Schools)

    • Kyoto Univresity, Department of micro engineering, 修了
    • Kyoto University, Department of micro engineering, 修了

    Academic Resume (Undergraduate School/Majors)

    • 京都大学, Engineering, Engineering Science, 卒業

    Research History

    • From Nov. 2020, To Present
      Kyoto University, 大学院工学研究科マイクロエンジニアリング専攻, Assistant professor
    • From Apr. 2018, To Oct. 2020
      SOINN Inc.
    • From Apr. 2016, To Mar. 2018
      Kyoto University, Graduate School of Engineering, Post doctoral researcher
    • From Apr. 2013, To Mar. 2016
      Japan Society for the Promotion of Science, Research fellow (DC1)

    Language of Instruction

    • Japanese
    • English

    ID,URL

    researchmap URL

    list
      Last Updated :2024/04/23

      Research

      Research Interests

      • Nano fabrication, Micro fluidics, Fluorescent microscopy, Bio materials

      Research Areas

      • Nanotechnology/Materials, Nanobioscience
      • Informatics, Mechanics and mechatronics
      • Nanotechnology/Materials, Nano/micro-systems

      Papers

      • Evaluation of Inulin and Albumin Permeability at Glomerular Filtration Barrier Constructed by Co-culture of Vascular Endothelial Cells and Podocytes
        Ayumu Tabuchi; Shozan Watabe; Stanislav L. Karsten; Kensuke Yabuuchi; Yoshiki Sahara; Minoru Takasato; Kazuya Fujimoto; Ryuji Yokokawa
        IEEJ Transactions on Sensors and Micromachines, 01 Sep. 2023
      • Deciphering potential vascularization factors of on-chip co-cultured hiPSC-derived cerebral organoids
        Maneesha Shaji; Atsushi Tamada; Kazuya Fujimoto; Keiko Muguruma; Stanislav L. Karsten; Ryuji Yokokawa
        Lab on a Chip, 2024, Peer-reviewed
      • SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids
        Kazuya Fujimoto; Yoshikazu Kameda; Yuta Nagano; Sayaka Deguchi; Takuya Yamamoto; Rafal P. Krol; Peter Gee; Yasufumi Matsumura; Toru Okamoto; Miki Nagao; Kazuo Takayama; Ryuji Yokokawa
        Lab on a Chip, 2024, Peer-reviewed, Lead author
      • Isogenic iPSC-derived proximal and distal lung-on-chip models: Tissue- and virus-specific immune responses in human lungs
        Sachin Yadav; Kazuya Fujimoto; Toru Takenaga; Senye Takahashi; Yukiko Muramoto; Ryuta Mikawa; Takeshi Noda; Shimpei Gotoh; Ryuji Yokokawa
        24 Nov. 2023
      • Tuning the collective motion of microtubules by their persistence length
        Zhou, H.; Jung, W.; Ishrat Farhana, T.; Fujimoto, K.; Kim, T.; Yokokawa, R.
        Biophysical journal, 2023
      • ヒト臍帯静脈内皮細胞をもちいたオンチップ血管網の長期培養に対する形態と機能の評価
        Atsuya Kitada; Maneesha Shaji; Taiga Irisa; Kazuya Fujimoto; Stanislav L. Karsten; Ryuji Yokokawa
        IEEJ Transactions on Sensors and Micromachines, 01 May 2023
      • Pericytes and shear stress each alter the shape of a self-assembled vascular network
        Kazuya Fujimoto; Scott Erickson; Masamune Nakayama; Hroki Ihara; Kei Sugihara; Yuji Nashimoto; Koichi Nishiyama; Takashi Miura; Ryuji Yokokawa
        Lab on a Chip, Jan. 2023, Peer-reviewed, Lead author
      • Long-term effect of sodium selenite on the integrity and permeability of on-chip microvasculature
        Maneesha Shaji; Atsuya Kitada; Kazuya Fujimoto; Stanislav L. Karsten; Ryuji Yokokawa
        APL Bioengineering, 01 Dec. 2022, Peer-reviewed
      • Durability of Aligned Microtubules Dependent on Persistence Length Determines Phase Transition and Pattern Formation in Collective Motion.
        Hang Zhou; Wonyeong Jung; Tamanna Ishrat Farhana; Kazuya Fujimoto; Taeyoon Kim; Ryuji Yokokawa
        ACS nano, 27 Sep. 2022, Peer-reviewed
      • Design and Fabrication of Linear-shaped Zero Mode Waveguides for Single Molecule Observation of Kinesin and Fluorescent ATP
        Fujimoto Kazuya; Morita Yuki; Iino Ryota; Tomishige Michio; Shintaku Hirofumi; Kotera Hidetoshi; Yokokawa Ryuji
        IEEJ Transactions on Sensors and Micromachines, 2017
      • Pneumatically-driven Microfluidic Device for Evaluating Active Transport by Kinesin Motor Protein
        Fujimoto Kazuya; Shintaku Hirofumi; Kotera Hidetoshi; Yokokawa Ryuji
        IEEJ Transactions on Sensors and Micromachines, 2016
      • Linear-Zero Mode Waveguides for Single-Molecule Fluorescence Observation of Nucleotides in Kinesin-Microtubule Motility Assay.
        Kazuya Fujimoto; Ryota Iino; Ryuji Yokokawa
        Methods in molecular biology (Clifton, N.J.), 2022
      • Evaluation of Trans-epithelial Electrical Resistance by Removal and Replenishment of Extracellular Ca2+
        Yuji Takata; Ryohei Ueno; Ramin Banan Sadeghian; Kaori Naganuma; Kiyotaka Tsuji; Kazuya Fujimoto; Ryuji Yokokawa
        IEEJ Transactions on Sensors and Micromachines, 01 Feb. 2022, Peer-reviewed
      • Three-dimensional tissue model in direct contact with an on-chip vascular bed enabled by removable membranes
        Yoshikazu Kameda; Surachada Chuaychob; Miwa Tanaka; Yang Liu; Ryu Okada; Kazuya Fujimoto; Takuro Nakamura; Ryuji Yokokawa
        Lab on a Chip, 2022, Peer-reviewed
      • Growth rate-dependent flexural rigidity of microtubules influences pattern formation in collective motion
        Hang Zhou; Naoto Isozaki; Kazuya Fujimoto; Ryuji Yokokawa
        Journal of Nanobiotechnology, Dec. 2021, Peer-reviewed
      • Simultaneous Observation of Kinesin-Driven Microtubule Motility and Binding of Adenosine Triphosphate Using Linear Zero-Mode Waveguides.
        Kazuya Fujimoto; Yuki Morita; Ryota Iino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        ACS nano, 26 Dec. 2018, Peer-reviewed, Lead author
      • Dynamic formation of a microchannel array enabling kinesin-driven microtubule transport between separate compartments on a chip.
        Kazuya Fujimoto; Moeto Nagai; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        Lab on a chip, 07 May 2015, Peer-reviewed, Lead author
      • Colocalization of quantum dots by reactive molecules carried by motor proteins on polarized microtubule arrays.
        Kazuya Fujimoto; Masuto Kitamura; Masatoshi Yokokawa; Isaku Kanno; Hidetoshi Kotera; Ryuji Yokokawa
        ACS nano, 22 Jan. 2013, Peer-reviewed, Lead author

      Misc.

      • Fluorescent observation of ATP binding in Kinesin driven microtubule gliding using nano-slits
        Kazuya Fujimoto; Ryota Lino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS), 24 Apr. 2018, Peer-reviewed
      • LINEAR ZERO MODE WAVEGUIDES FOR THE STUDY OF CHEMO-MECHANICAL COUPLING MECHANISM OF KINESIN
        Kazuya Fujimoto; Yuki Morita; Ryota Iino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        30TH IEEE INTERNATIONAL CONFERENCE ON MICRO ELECTRO MECHANICAL SYSTEMS (MEMS 2017), 2017, Peer-reviewed
      • KINESIN BEADS ASSAY IN MICRO CHANNELS TOWARD MOLECULAR MANIPULATION DIRECTLY DRIVEN BY MOTOR PROTEINS
        K. Fujimoto; H. Shintaku; H. Kotera; R. Yokokawa
        2015 TRANSDUCERS - 2015 18TH INTERNATIONAL CONFERENCE ON SOLID-STATE SENSORS, ACTUATORS AND MICROSYSTEMS (TRANSDUCERS), 2015
      • Manipulation and Observation of Binding of Molecules Driven by Motor Proteins
        Kazuya Fujimoto; Masuto Kitamura; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa; Masatoshi Yokokawa
        6TH IEEE INTERNATIONAL CONFERENCE ON NANO/MOLECULAR MEDICINE AND ENGINEERING (IEEE-NANOMED 2012), 2012, Peer-reviewed
      • Colocalization of q-dots carried by motor proteins on microtubule array in nanotracks
        Kazuya Fujimoto; Masuto Kitamura; Masatoshi Yokokawa; Hidetoshi Kotera; Ryuji Yokokawa; Ryuji Yokokawa
        Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012, 01 Jan. 2012
      • DUAL Q-DOT TRANSPORT ON MICROTUBULE ARRAY WITH POLARITY DEFINED BY NANOTRACKS AND MICROTUBULE MOTILITY CONTROL
        Masatoshi Yokokawa; Kazuya Fujimoto; Masuto Kitamura; Ryuji Yokokawa; Hidetoshi Kotera
        2011 IEEE 24TH INTERNATIONAL CONFERENCE ON MICRO ELECTRO MECHANICAL SYSTEMS (MEMS), 2011
      • Single-molecule Fluorescence Imaging of Kinesin Using Linear Zero-Mode Waveguides
        Yuki Morita; Kazuya Fujimoto; Ryota Iino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        2016 IEEE SENSORS, 2016
      • TRANSITION OF Q-DOT DISTRIBUTION ON MICROTUBULE ARRAY ENCLOSED BY PDMS SEALING FOR AXONAL TRANSPORT MODEL
        Kazuya Fujimoto; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        2014 IEEE 27TH INTERNATIONAL CONFERENCE ON MICRO ELECTRO MECHANICAL SYSTEMS (MEMS), 2014
      • Manipulation and Observation of Binding of Molecules Driven by Motor Proteins
        Kazuya Fujimoto; Masuto Kitamura; Masatoshi Yokokawa; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        6TH IEEE INTERNATIONAL CONFERENCE ON NANO/MOLECULAR MEDICINE AND ENGINEERING (IEEE-NANOMED 2012), 2012
      • Single molecule observation of fluorescent labelled ATP in microtubule gliding motility using LZMWs
        藤本 和也; 飯野 亮太; 富重 道雄; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 31 Oct. 2017
      • Visualization of ATP hydrolysis cycle of kinesin in LZMW
        藤本 和也; 森田 有貴; 飯野 亮太; 富重 道雄; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 02 Oct. 2016
      • Evaluation of kinesin bead assay driven transport in dynamic microchannel and numerical analysis
        藤本 和也; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 28 Oct. 2015
      • Control of MT gliding in dynamically formed micro channels
        藤本 和也; 新宅 博文; 小寺 秀俊
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 20 Oct. 2014

      Presentations

      • 胞巣状軟部肉腫モデルにおける血管内皮細胞種に依存した血管新生の評価
        萩庭 歩美; Chuaychob Surachada; 藤本 和也; 横川 隆司; 田中 美和; 中村 卓郎
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • ヒトiPS細胞由来の近位尿細管細胞を用いたMPSにおける膜輸送体の評価
        川上 瑛彦; Ramin Banan Sadeghian; Ma Cheng; 藤本 和也; 横川 隆司; 荒岡 利和; 髙里 実
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • 豊富な血管内皮細胞を含む腎臓オルガノイドと血管床との共培養
        亀田 良一; 荒岡 利和; 藤本 和也; 横川 隆司; 籔内 研祐; 谷口 純一; 髙里 実
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • オンチップ血管網形成過程の数理モデルに基づいた定量的評価
        藤本 和也; 亀田 良一; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • 気管支オルガノイドへのSARS-CoV-2感染が血管内皮細胞に引き起こすアクチンフィラメントの配向性変化
        長野 湧太; 亀田 良一; 藤本 和也; 横川 隆司; 出口 清香; 高山 和雄
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • Evaluation of podocyte sources for Adriamycin-induced focal segmental glomerulosclerosis model on a microfluidic device
        Koh Darryl; 田渕 史; 渡部 祥山; 藤本 和也; 横川 隆司; 籔内 研佑; 佐原 義基; 髙里 実
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2022, Institute of Electrical Engineers of Japan
      • ヒトiPS細胞由来の近位尿細管細胞を用いたMPSにおけるP-gpとSGLT2の輸送能評価
        川上 瑛彦; Ramin Banan Sadeghian; Ma Cheng; 藤本 和也; 荒岡 利和; 髙里 実; 横川 隆司
        年次大会, 2022, 一般社団法人 日本機械学会
      • 3次元組織との共培養に向けた既知組成環境での血管網オンチップ作製
        入佐 大河; Shaji Maneesha; 亀田 良一; 藤本 和也; L. Karsten Stanislav; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2021, Institute of Electrical Engineers of Japan
      • 腎臓オルガノイド由来糸球体細胞を用いたon-chip糸球体ろ過障壁における透過性評価およびPAN毒性評価
        田渕 史; 渡部 祥山; 藤本 和也; L. Karsten Stanislav; 横川 隆司; 藪内 研佑; 佐原 義基; 高里 実
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2021, Institute of Electrical Engineers of Japan
      • ヒトiPS細胞由来ポドサイトにおける特異的タンパク質の発現評価
        渡部 祥山; 田渕 史; 荒岡 利和; 藤本 和也; L. Karsten Stanislav; 横川 隆司; 薮内 研佑; 高里 実
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2021, Institute of Electrical Engineers of Japan
      • 畳み込みニューラルネットワークを用いた微小管の曲げ剛性評価手法の提案
        堀田 英幹; Zhou Hang; 藤本 和也; Tamanna Ishrat Farhana; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], Nov. 2021, Institute of Electrical Engineers of Japan
      • Fluorescent observation of ATP binding in Kinesin driven microtubule gliding using nano-slits
        Kazuya Fujimoto; Ryota Lino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS), 24 Apr. 2018, Institute of Electrical and Electronics Engineers Inc.
      • Single molecule observation of fluorescent labelled ATP in microtubule gliding motility using LZMWs
        藤本 和也; 飯野 亮太; 富重 道雄; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 31 Oct. 2017, Institute of Electrical Engineers of Japan
      • LINEAR ZERO MODE WAVEGUIDES FOR THE STUDY OF CHEMO-MECHANICAL COUPLING MECHANISM OF KINESIN
        Kazuya Fujimoto; Yuki Morita; Ryota Iino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        30TH IEEE INTERNATIONAL CONFERENCE ON MICRO ELECTRO MECHANICAL SYSTEMS (MEMS 2017), 2017, IEEE
      • Visualization of ATP hydrolysis cycle of kinesin in LZMW
        藤本 和也; 森田 有貴; 飯野 亮太; 富重 道雄; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 02 Oct. 2016, Institute of Electrical Engineers of Japan
      • Single-molecule Fluorescence Imaging of Kinesin Using Linear Zero-Mode Waveguides
        Yuki Morita; Kazuya Fujimoto; Ryota Iino; Michio Tomishige; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        2016 IEEE SENSORS, 2016, IEEE
      • Evaluation of kinesin bead assay driven transport in dynamic microchannel and numerical analysis
        藤本 和也; 新宅 博文; 小寺 秀俊; 横川 隆司
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 28 Oct. 2015, Institute of Electrical Engineers of Japan
      • KINESIN BEADS ASSAY IN MICRO CHANNELS TOWARD MOLECULAR MANIPULATION DIRECTLY DRIVEN BY MOTOR PROTEINS
        K. Fujimoto; H. Shintaku; H. Kotera; R. Yokokawa
        2015 TRANSDUCERS - 2015 18TH INTERNATIONAL CONFERENCE ON SOLID-STATE SENSORS, ACTUATORS AND MICROSYSTEMS (TRANSDUCERS), 2015, IEEE
      • Control of MT gliding in dynamically formed micro channels
        藤本 和也; 新宅 博文; 小寺 秀俊
        「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 20 Oct. 2014, Institute of Electrical Engineers of Japan
      • TRANSITION OF Q-DOT DISTRIBUTION ON MICROTUBULE ARRAY ENCLOSED BY PDMS SEALING FOR AXONAL TRANSPORT MODEL
        Kazuya Fujimoto; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        2014 IEEE 27TH INTERNATIONAL CONFERENCE ON MICRO ELECTRO MECHANICAL SYSTEMS (MEMS), 2014, IEEE
      • Manipulation and Observation of Binding of Molecules Driven by Motor Proteins
        Kazuya Fujimoto; Masuto Kitamura; Masatoshi Yokokawa; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa
        6TH IEEE INTERNATIONAL CONFERENCE ON NANO/MOLECULAR MEDICINE AND ENGINEERING (IEEE-NANOMED 2012), 2012, IEEE
      • Colocalization of q-dots carried by motor proteins on microtubule array in nanotracks
        Kazuya Fujimoto; Masuto Kitamura; Masatoshi Yokokawa; Hidetoshi Kotera; Ryuji Yokokawa; Ryuji Yokokawa
        Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012, 01 Jan. 2012
      • Manipulation and Observation of Binding of Molecules Driven by Motor Proteins
        Kazuya Fujimoto; Masuto Kitamura; Hirofumi Shintaku; Hidetoshi Kotera; Ryuji Yokokawa; Masatoshi Yokokawa
        6TH IEEE INTERNATIONAL CONFERENCE ON NANO/MOLECULAR MEDICINE AND ENGINEERING (IEEE-NANOMED 2012), 2012, IEEE

      External funds: Kakenhi

      • On chip vascular bed control by the combination of vasculogenesis and angiogensis
        Grant-in-Aid for Early-Career Scientists
        Basic Section 28050:Nano/micro-systems-related
        Kyoto University
        藤本 和也
        From 01 Apr. 2023, To 31 Mar. 2026, Granted
        マイクロ流体デバイス;血管新生;脈管形成;血管内皮;自己組織化
      list
        Last Updated :2024/04/23

        Education

        Teaching subject(s)

        • From 01 Apr. 2023, To 31 Mar. 2024
          Mechanical and System Engineering Laboratory 2
          5057, Spring, Faculty of Engineering, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Mechanical and System Engineering Laboratory 2
          5057, Fall, Faculty of Engineering, 1

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