Basic Information

Faculty

• Faculty of Engineering

Concurrent Affiliation

• Center for the Promotion of Interdisciplinary Education and Research (C-PiER), スーパーグローバルコース 化学系ユニット

Professional Memberships

• Japanese Society of Enzyme Engineering
• Japan Society for Archaea
• The Society for Biotechnology, Japan
• JAPANESE SOCIETY FOR EXTREMOPHILES
• JAPAN SOCIETY FOR BIOSCIENCE, BIOTECHNOLOGY, AND AGROCHEMISTRY

Academic Degree

• 修士（工学）(京都大学)
• 博士（工学）(京都大学)

Research History

• From Aug. 2021, To Present

  京都大学, 大学院工学研究科 合成・生物化学専攻, 准教授
• From Oct. 2009, To Jul. 2021

  Kyoto University, Graduate School of Engineering, Department of Synthetic Chemistry and Biological Chemistry, 助教
• From Apr. 2007, To Sep. 2009

  第一三共株式会社
• From Apr. 2006, To Mar. 2007

  三共株式会社
• From Apr. 2003, To Mar. 2006

  Japan Society for the Promotion of Science, 特別研究員（DC1）

Language of Instruction

• English

ID,URL

• J-Global ID

  200901064906382977

• Researcher number

  60571411

researchmap URL

• https://researchmap.jp/read0112764

Research

Research Topics, Overview of the research

• Research Topics

  Identification of novel enzymes and metabolic pathways in Archaea and intestinal bacteria

• Overview of the research

  Archaea is microorganism composing the third domain of life apart from Bacteria and Eucarya. In many cases, metabolism in Archaea is different from those of Bacteria and Eucarya. The purpose of this study is to identify the previously-unrecognized metabolic pathway and, consequently, novel biological system in Archaea. In addition, studies about metabolic system in intestinal bacteria are carried out to apply to regulation of intestinal microbiome.

Research Interests

• enzyme
• Metabolism
• Archaea
• intestinal bacteria
• Extremophile
• 超好熱菌

Research Areas

• Life sciences, Applied microbiology

Papers

• The Lreu 1276 protein from Limosilactobacillus reuteri represents a third family of dihydroneopterin triphosphate pyrophosphohydrolases in bacteria

  Kaede Kachi; Takaaki Sato; Maina Nagasawa; Isaac Cann; Haruyuki Atomi

  Appl. Environ. Microbiol., Jun. 2024, Peer-reviewed, Corresponding author

  
• Removal of phosphoglycolate in hyperthermophilic archaea

  Yuta Michimori, Rikihisa Izaki, Yu Su, Yuto Fukuyama, Shigeru Shimamura, Karin Nishimura, Yuya Miwa, Sotaro Hamakita, Takahiro Shimosaka, Yuki Makino, Ryo Takeno, Takaaki Sato, Haruki Beppu, Isaac Cann, Tamotsu Kanai, Takuro Nunoura, Haruyuki Atomi

  Proc. Natl. Acad. Sci. USA, Apr. 2024, Peer-reviewed

  
• Structural determination and chemical synthesis of N‐glycan from the hyperthermophilic archaeon Thermococcus kodakarensis

  Kohtaro Hirao; Immacolata Speciale; Anna Notaro; Yoshiyuki Manabe; Yoshiaki Teramoto; Takaaki Sato; Haruyuki Atomi; Antonio Molinaro; Yoshihiro Ueda; Cristina D. Castro; Koichi Fukase

  Angew. Chem. Int. Ed. Engl., Mar. 2023, Peer-reviewed

  
• A non-carboxylating pentose bisphosphate pathway in halophilic archaea

  Takaaki Sato; Sanae (Hodo) Utashima; Yuta Yoshii; Kosuke Hirata; Shuichiro Kanda; Yushi Onoda; Jian-qiang Jin; Suyi Xiao; Ryoko Minami; Hikaru Fukushima; Ayako Noguchi; Yoshiyuki Manabe; Koichi Fukase; Haruyuki Atomi

  Commun. Biol., Nov. 2022, Peer-reviewed, Lead author

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• A lipoate-protein ligase is required for de novo lipoyl-protein biosynthesis in the hyperthermophilic archaeon Thermococcus kodakarensis.

  Jian-Qiang Jin; Takaaki Sato; Shin-Ichi Hachisuka; Haruyuki Atomi

  Appl. Environ. Microbiol., Jun. 2022, Peer-reviewed

  
• Identification and enzymatic analysis of an archaeal ATP-dependent serine kinase from the hyperthermophilic archaeon Staphylothermus marinus

  Yasunobu Mori; Hiroki Kawamura; Takaaki Sato; Takayuki Fujita; Ryuhei Nagata; Masahiro Fujihashi; Kunio Miki; Haruyuki Atomi

  J. Bacteriol., Jul. 2021, Peer-reviewed

  
• Altering the phosphorylation position of pyrophosphate-dependent myo-inositol-1-kinase based on its crystal structure

  Ryo Tashiro; Takaaki Sato; Haruyuki Atomi; Kunio Miki; Masahiro Fujihashi

  ACS Chem. Biol., May 2021, Peer-reviewed

  
• A structurally novel lipoyl synthase in the hyperthermophilic archaeon Thermococcus kodakarensis

  Jian-qiang Jin; Shin-ichi Hachisuka; Takaaki Sato; Tsuyoshi Fujiwara; Haruyuki Atomi

  Appl. Environ. Microbiol., Nov. 2020, Peer-reviewed

  
• Integration of large heterologous DNA fragments into the genome of Thermococcus kodakarensis.

  Takaaki Sato; Daisuke Takada; Takashi Itoh; Moriya Ohkuma; Haruyuki Atomi

  Extremophiles, May 2020, Peer-reviewed, Lead author

  
• Thermophilic degradation of hemicellulose, a critical feedstock in the production of bioenergy and other value-added products.

  Isaac Cann; Gabriel V Pereira; Ahmed M Abdel-Hamid; Heejin Kim; Daniel Wefers; Boniface B Kayang; Tamotsu Kanai; Takaaki Sato; Rafael C Bernardi; Haruyuki Atomi; Roderick I Mackie

  Appl. Environ. Microbiol., 18 Mar. 2020, Peer-reviewed

  
• Identification of a pyrophosphate-dependent kinase and its donor selectivity determinants

  Nagata R; Fujihashi M; Sato T; Atomi H; Miki K

  Nat. Commun., May 2018, Peer-reviewed

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• The hyperthermophilic archaeon Thermococcus kodakarensis utilizes a four-step pathway for NAD+ salvage through nicotinamide deamination.

  Hachisuka SI; Sato T; Atomi H

  J. Bacteriol., May 2018, Peer-reviewed

  
• Phytoene production utilizing the isoprenoid biosynthesis capacity of Thermococcus kodakarensis

  Tsubasa Fuke; Takaaki Sato; Savyasachee Jha; Myra L. Tansengco; Haruyuki Atomi

  Extremophiles, 01 Mar. 2018, Peer-reviewed

  
• A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.

  Takuro Nunoura; Yoshito Chikaraishi; Rikihisa Izaki; Takashi Suwa; Takaaki Sato; Takeshi Harada; Koji Mori; Yumiko Kato; Masayuki Miyazaki; Shigeru Shimamura; Katsunori Yanagawa; Aya Shuto; Naohiko Ohkouchi; Nobuyuki Fujita; Yoshihiro Takaki; Haruyuki Atomi; Ken Takai

  Science, 02 Feb. 2018, Peer-reviewed

  
• Structural study on the reaction mechanism of a free serine kinase involved in cysteine biosynthesis

  Ryuhei Nagata; Masahiro Fujihashi; Hiroki Kawamura; Takaaki Sato; Takayuki Fujita; Haruyuki Atomi; Kunio Miki

  ACS Chem. Biol., Jun. 2017, Peer-reviewed

  
• Metabolism dealing with thermal degradation of NAD+ in the hyperthermophilic archaeon Thermococcus kodakarensis

  Shin-Ichi Hachisuka; Takaaki Sato; Haruyuki Atomi

  Journal of Bacteriology, 2017, Peer-reviewed

  
• Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis

  Tetsu Shimizu; Lulu Yin; Ayako Yoshida; Yuusuke Yokooji; Shin-ichi Hachisuka; Takaaki Sato; Takeo Tomita; Hiromi Nishida; Haruyuki Atomi; Tomohisa Kuzuyama; Makoto Nishiyama

  BIOCHEMICAL JOURNAL, Jan. 2017, Peer-reviewed

  
• An archaeal ADP-dependent serine kinase involved in cysteine biosynthesis and serine metabolism

  Yuki Makino; Takaaki Sato; Hiroki Kawamura; Shin-ichi Hachisuka; Ryo Takeno; Tadayuki Imanaka; Haruyuki Atomi

  Nat. Commun., Nov. 2016, Peer-reviewed

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• Mutation design of a thermophilic Rubisco based on three-dimensional structure enhances its activity at ambient temperature

  Masahiro Fujihashi; Yuichi Nishitani; Tomohiro Kiriyama; Riku Aono; Takaaki Sato; Tomoyuki Takai; Kenta Tagashira; Wakao Fukuda; Haruyuki Atomi; Tadayuki Imanaka; Kunio Miki

  Proteins, Oct. 2016, Peer-reviewed

  
• Crystal structure and product analysis of an archaeal myo-Inositol kinase reveal substrate recognition mode and 3-OH phosphorylation

  Ryuhei Nagata; Masahiro Fujihashi; Takaaki Sato; Haruyuki Atomi; Kunio Miki

  Biochemistry, Jun. 2015, Peer-reviewed

  
• A pentose bisphosphate pathway for nucleoside degradation in Archaea

  Riku Aono; Takaaki Sato; Tadayuki Imanaka; Haruyuki Atomi

  Nat. Chem. Biol., May 2015, Peer-reviewed

  
• The tryptophan synthase beta-subunit paralogs TrpB1 and TrpB2 in Thermococcus kodakarensis are both involved in tryptophan biosynthesis and indole salvage

  Takayoshi Hiyama; Takaaki Sato; Tadayuki Imanaka; Haruyuki Atomi

  FEBS JOURNAL, Jul. 2014, Peer-reviewed

  
• Structure Analysis of Archaeal AMP Phosphorylase Reveals Two Unique Modes of Dimerization

  Yuichi Nishitani; Riku Aono; Akira Nakamura; Takaaki Sato; Haruyuki Atomi; Tadayuki Imanaka; Kunio Miki

  J. Mol. Biol., Aug. 2013, Peer-reviewed

  
• An Uncharacterized Member of the Ribokinase Family in Thermococcus kodakarensis Exhibits myo-Inositol Kinase Activity

  Takaaki Sato; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Haruyuki Atomi

  J. Biol. Chem., Jul. 2013, Peer-reviewed

  
• Genetic examination of initial amino acid oxidation and glutamate catabolism in the hyperthermophilic archaeon Thermococcus kodakarensis

  Yuusuke Yokooji; Takaaki Sato; Shinsuke Fujiwar; Tadayuki Imanak; Haruyuki Atomi

  Journal of Bacteriology, May 2013, Peer-reviewed

  
• Programmable plasmid interference by the CRISPR-Cas system in Thermococcus kodakarensis

  Joshua R. Elmore; Yuusuke Yokooji; Takaaki Sato; Sara Olson; Claiborne V. C. Glover III; Brenton R. Graveley; Haruyuki Atomi; Rebecca M. Terns; Michael P. Terns

  RNA Biology, 2013, Peer-reviewed

  
• Enzymatic Characterization of AMP Phosphorylase and Ribose-1,5-Bisphosphate Isomerase Functioning in an Archaeal AMP Metabolic Pathway

  Riku Aono; Takaaki Sato; Ayumu Yano; Shosuke Yoshida; Yuichi Nishitani; Kunio Miki; Tadayuki Imanaka; Haruyuki Atomi

  J. Bacteriol., Dec. 2012, Peer-reviewed

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• Dynamic, Ligand-dependent Conformational Change Triggers Reaction of Ribose-1,5-bisphosphate Isomerase from Thermococcus kodakarensis KOD1

  Akira Nakamura; Masahiro Fujihashi; Riku Aono; Takaaki Sato; Yosuke Nishiba; Shosuke Yoshida; Ayumu Yano; Haruyuki Atomi; Tadayuki Imanaka; Kunio Miki

  J. Biol. Chem., Jun. 2012, Peer-reviewed

  
• Application of hyperthermophiles and their enzymes

  Haruyuki Atomi; Takaaki Sato; Tamotsu Kanai

  Curr. Opin. Biotechnol., Oct. 2011, Peer-reviewed

  
• Novel metabolic pathways in Archaea

  Takaaki Sato; Haruyuki Atomi

  Curr. Opin. Microbiol., Jun. 2011, Peer-reviewed

  
• Archaeal type IIIRuBisCOs function in a pathway for AMP metabolism

  Takaaki Sato; Haruyuki Atomi; Tadayuki Imanaka

  Science, Feb. 2007, Peer-reviewed

  
• The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis

  Orita, I; T Sato; H Yurimoto; N Kato; H Atomi; T Imanaka; Y Sakai

  J. Bacteriol., Jul. 2006, Peer-reviewed

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• Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis

  T Sato; T Fukui; H Atomi; T Imanaka

  Appl. Environ. Microbiol., Jul. 2005, Peer-reviewed

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• Genetic evidence identifying the true gluconeogenic fructose-1,6-bisphosphatase in Thermococcus kodakaraensis and other hyerthermophiles.

  T Sato; H Imanaka; N Rashid; T Fukui; H Atomi; T Imanaka

  J. Bacteriol., Sep. 2004, Peer-reviewed

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• Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1

  T Sato; T Fukui; H Atomi; T Imanaka

  J. Bacteriol., Jan. 2003, Peer-reviewed

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Misc.

• メタン生成菌に分類されるのにメタン生成しない新規微生物

  佐藤喬章

  現代化学, Oct. 2024, Peer-reviewed, Invited

  
• Complete genome analysis and development of gene disruption technology in the hyperthermophilic archaeon, Thermococcus kodakaraensis

  Tadayuki Imanaka; Toshiaki Fukui; Takaaki Sato; Hiroyuki Imanaka; Rie Matsumi; Haruyuki Atomi

  Proceedings for the 2005 International Symposium on Micro-NanoMechatronics and Human Science, 2005

  
• カメレオン酵素セリンキナーゼ

  佐藤喬章

  生物工学会誌 バイオミディア, Oct. 2022, Peer-reviewed, Invited

  
• 若手研究者からのメッセージ

  佐藤喬章

  日本化学会バイオテクノロジー部会 NEWS LETTER, Aug. 2021, Peer-reviewed, Invited

  
• 真核生物に最も近い原核生物アスガルドアーキア

  佐藤喬章

  化学と生物「今日の話題」, 01 Sep. 2020, Peer-reviewed, Invited, Lead author, Corresponding author

  
• アーキアにおける新規システイン生合成経路の同定

  佐藤喬章

  酵素工学ニュース, Apr. 2018, Invited

  
• 超好熱菌の高温適応戦略(<特集>環境ストレスに対する微生物応答と適応機構)

  佐藤喬章; 跡見晴幸

  生物工学会誌, 2015, Invited

  
• アーキアにおいてヌクレオシドの分解を担うペントースビスリン酸経路の発見

  青野陸; 佐藤喬章; 跡見晴幸

  ライフサイエンス新着論文レビュー, 2015, Invited

  
• アーキアで見つかった新しい核酸分解経路―光合成反応の起源と進化に迫る発見

  青野陸; 佐藤喬章; 跡見晴幸

  化学, 2015, Invited

  
• 超好熱菌のゲノム情報とポストゲノム研究の展開

  佐藤喬章; 跡見晴幸

  CSJ Curr Rev, 30 Nov. 2014

  
• 大腸菌のあれこれ

  佐藤 喬章

  「よく分かるバイオ」フジサンケイビジネスアイ, Jun. 2014

  
• Extremophiles 2010: 8th International Congress on Extremophiles

  SATO Takaaki

  酵素工学ニュース, Oct. 2010, Invited

  
• Biochemical and genetic analyses on enzymes involved in central carbon metabolism in the hyperthermophilic archaeon, Thermococcus kodakaraensis

  Haruyuki Atomi; Takaaki Sato; Hiroyuki Imanaka; Wakao Fukuda; Naeem Rashid; Toshiaki Fukui; Tadayuki Imanaka

  Proceedings for International Symposium on Extremophiles and their Applications, 2005

  
• アーキアとは何ぞや？

  佐藤喬章

  生物工学会誌 バイオよもやま話, Nov. 2021, Peer-reviewed, Invited, Lead author

  

Presentations

• 腸内細菌における葉酸生合成に関わるミッシングエンザイムの同定

  佐藤 喬章; 長澤 舞奈; 加地 楓; Cann Isaac; 跡見 晴幸

  日本農芸化学会2025年度大会, 05 Mar. 2025

  
• ArchaeaにおけるType III Rubiscoの機能解明

  佐藤喬章; 矢野歩; 跡見晴幸; 今中忠行

  第18回農芸化学Frontiersシンポジウム, 27 Mar. 2010, Invited

  
• Archaea由来Type III Rubiscoの生体内における機能推定

  佐藤喬章; 跡見晴幸; 今中忠行

  日本農芸化学会2006年度大会, 27 Mar. 2006

  
• 遺伝学的手法による超好熱菌のFructose-16-bisphosphataseの同定

  佐藤喬章; 今中洋行; Naeem Rashid; 福居俊昭; 跡見晴幸; 今中忠行

  日本Archaea研究会第17回講演会, 09 Jul. 2004

  
• 腸内乳酸菌における葉酸生合成酵素の同定

  佐藤喬章; 加地楓; 長澤舞奈; Isaac Cann; 跡見晴幸

  第18回バイオ関連化学シンポジウム, 13 Sep. 2024

  
• アスガルドアーキアにおける フルクトース-1,6-ビスホスファターゼの探索

  佐藤喬章; 中川裕介; 跡見晴幸

  第76回日本生物工学会大会, 08 Sep. 2024

  
• アスガルドアーキアにおける fructose-1,6-bisphosphataseの探索

  佐藤喬章; 中川裕介; 跡見晴幸

  日本農芸化学会2024年度大会, 2024

  
• 好塩性アーキアにおける新規ヌクレオシド分解系の同定

  佐藤喬章; 歌島(法土)咲菜恵; 吉井祐太; 平田晃右; 神田脩一郎; 斧田優志; Jin Jian-qiang; Xiao Suyi; 南瞭子; 福島ひかる; 野口綾子; 真鍋良幸; 深瀬浩一; 跡見晴幸

  第17回バイオ関連化学シンポジウム, 10 Sep. 2023

  
• 好塩性アーキアにおける新規ヌクレオシド代謝系の同定

  佐藤喬章; 歌島(法土; 咲菜恵; 吉井祐太; 平田晃右; 神田脩一郎; 斧田優志; Jin Jian-qiang; Xiao Suyi; 南瞭子; 福島ひかる; 野口綾子; 真鍋良幸; 深瀬浩一; 跡見晴幸

  第75回日本生物工学会大会, 05 Sep. 2023

  
• 腸内細菌における葉酸生合成に関わる酵素の同定

  佐藤喬章; 加地楓; 跡見晴幸

  第74回 日本生物工学会大会, 19 Oct. 2022

  
• Identification of a previously unrecognized nucleoside degradation pathway in haloarchaea

  Takaaki Sato; Sanae (Hodo) Utashima; Yuta Yoshii; Kosuke Hirata; Shuichiro Kanda; Yushi Onoda; Jian-qiang Jin; Suyi Xiao; Ryoko Minami; Hikaru Fukushima; Ayako Noguchi; Yoshiyuki Manabe; Koichi Fukase; Haruyuki Atomi

  13th International congress on Extremophiles, 21 Sep. 2022

  
• 超好熱性アーキアにおけるタンパク質リポイル化機構の解明

  佐藤 喬章; Jian-qiang JIN; 蜂須賀 真一; 藤原 毅; 跡見 晴幸

  第16回バイオ関連化学シンポジウム, 10 Sep. 2022

  
• 超好熱始原菌Thermococcus kodakaraensis KOD1の遺伝子破壊系の構築

  佐藤 喬章; 福居 俊昭; 跡見 晴幸; 今中 忠行

  第54回 日本生物工学会大会, Oct. 2002

  
• 超好熱性アーキアThermococcus kodakarensisにおける タンパク質リポイル化機構の解明

  佐藤 喬章; Jian-qiang JIN; 蜂須賀 真一; 藤原 毅; 跡見 晴幸

  日本Archaea研究会 第34回講演会, 16 Jul. 2022

  
• 腸内細菌における葉酸生合成遺伝子の同定

  佐藤喬章; 加地楓; 跡見晴幸

  日本農芸化学会2022年度大会, 17 Mar. 2022

  
• 超好熱性アーキアStaphylothermus marinus におけるATP-dependent serine kinase の同定

  佐藤喬章; 森康暢; 川村弘樹; 藤田嵩之; 永田隆平; 藤橋雅宏; 三木邦夫; 跡見晴幸

  第73回 日本生物工学会大会, 28 Oct. 2021

  
• 超好熱性アーキアにおけるserine kinaseの同定

  佐藤 喬章、牧野 勇樹、森 康暢、川村 弘樹、蜂須賀 真一、藤田 嵩之、竹野 領、永田 隆平、藤橋 雅宏、三木 邦夫、今中 忠行、跡見 晴幸

  第15回バイオ関連化学シンポジウム, 09 Sep. 2021

  
• 超好熱性アーキアにおけるリポ酸生合成遺伝子の同定

  佐藤喬章、蜂須賀真一、跡見晴幸

  日本農芸化学会 2020年度大会, 28 Mar. 2020

  
• 超好熱性アーキアにおけるリポ酸生合成遺伝子の同定

  佐藤喬章、蜂須賀真一、跡見晴幸

  日本農芸化学会 2020年度大会, 26 Mar. 2020

  
• 好塩性アーキアHalobacterium salinarumにおけるグリコールアルデヒド還元酵素の同定

  佐藤 喬章、平田 晃右、南 瞭子、跡見 晴幸

  極限環境生物学会 2019年度 年会, 17 Nov. 2019

  
• アーキア特異的な代謝に関わる新規酵素の同定

  佐藤喬章

  第82回 酵素工学研究会, 01 Nov. 2019, Invited

  
• 超好熱性アーキアThermococcus kodakarensisにおけるリポ酸生合成遺伝子の同定

  佐藤喬章、蜂須賀真一、藤原毅、Jian-qiang Jin、跡見晴幸

  第82回 酵素工学研究会, 01 Nov. 2019

  
• Identification and functional analysis of an enzyme metabolizing glycolaldehyde in halophilic archaea

  Takaaki Sato; Kosuke Hirata; Ryoko Minami; Haruyuki Atomi

  第71回 日本生物工学会 大会, 18 Sep. 2019

  
• Isoprenoid production utilizing a hyperthermophilic archaeon

  Takaaki Sato; Tsubasa Fuke; Savyasachee Jha; Myra L. Tansengco; Haruyuki Atomi

  1st Japan 1st Japan -Germany Germany Germany-SwitzerlandSwitzerland SwitzerlandSwitzerlandSwitzerland SwitzerlandWorkshop Workshop Workshop for Enzyme Technology and Bioprocess Developmentfor Enzyme Technology and Bioprocess Development for Enzyme Technol, 11 Sep. 2019

  
• Identification of genes involved in lipoate biosynthesis in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Shin-ichi Hachisuka; Tsuyoshi Fujiwara; Jian-qiang Jin; Haruyuki Atomi

  15th International Congress on Thermophiles, 05 Sep. 2019

  
• ゲノム情報を基盤としたアーキアにおける新規酵素の同定と利用

  佐藤喬章

  第20回酵素応用シンポジウム, 14 Jun. 2019, Invited

  
• 好塩性アーキアにおける新規ヌクレオシド代謝経路の同定

  佐藤喬章; 法土咲菜恵; 吉井祐太; 南瞭子; 平田晃右; 神田脩一郎; 野口綾子; 真鍋良幸; 深瀬浩一; 跡見晴幸

  酵素工学研究会 第80回講演会, 16 Nov. 2018

  
• Metabolic pathways salvaging thermal degradation products from NAD+ in hyperthermophiles

  Takaaki SATO; Shin-ichi Hachisuka; Haruyuki Atomi

  12th International Congress on Extremophiles (Extremophiles2019), 18 Sep. 2018

  
• 超好熱菌におけるNAD+熱分解産物の再利用代謝機構の解明

  佐藤喬章; 蜂須賀真一; 跡見晴幸

  第70回 生物工学会大会, 06 Sep. 2018

  
• アーキアにおけるADP-dependent serine kinaseの同定と解析

  佐藤喬章; 牧野勇樹; 川村弘樹; 藤橋雅宏; 永田隆平; 竹野領; 蜂須賀真一; 藤田嵩之; 今中忠行; 三木邦夫; 跡見晴幸

  第31回日本Archaea研究会（極限環境生物学会シンポジウムと合同）, 04 Aug. 2018

  
• Identification of metabolic pathways salvaging thermal degradation products from NAD+ in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Shin-ichi Hachisuka; Haruyuki Atomi

  15th Japan-China-Korea Joint Symposium on Enzyme Engineering, 01 Jul. 2018

  
• 超好熱性アーキアにおけるNAD+熱分解産物の再利用機構

  佐藤喬章; 蜂須賀真一; 跡見晴幸

  第12回日本ゲノム微生物学会年会, Mar. 2018

  
• アーキアを利用したイソプレノイド炭化水素の生産

  佐藤喬章; 福家翼; Savyasachee Jha; Myra L. Tansengco; 跡見晴幸

  酵素工学研究会 第78回講演会, 06 Oct. 2017

  
• アーキアのイソプレノイド合成能を利用した炭化水素生産

  佐藤喬章; 福家翼; Savyasachee Jha; Myra Tansengco; 跡見晴幸

  日本農芸化学会2017年度大会, Mar. 2017

  
• 超好熱性アーキアにおけるmyo-inositol kinaseの同定と解析

  佐藤喬章; 藤橋雅宏; 永田隆平; 宮本幸花; 桑田啓子; 日下絵里子; 藤田春雄; 三木邦夫; 跡見晴幸

  第17回極限環境生物学会年会, 26 Nov. 2016

  
• Functional characterization of three ribokinase family proteins in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Riku Aono; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Tadayuki Imanaka; Haruyuki Atomi

  The 14th China-Japan-Korea Joint Symposium on Enzyme Engineering, 17 Nov. 2016

  
• 超好熱性アーキアにおける新規serine kinaseの同定

  佐藤喬章; 牧野勇樹; 川村弘樹; 蜂須賀真一; 竹野領; 跡見晴幸

  酵素工学研究会第76回講演会, 07 Oct. 2016

  
• An archaeal ADP-dependent kinase that phosphorylates free serine

  Takaaki Sato; Yuki Makino; Hiroki Kawamura; Shin-ichi Hachisuka; Ryo Takeno; Tadayuki Imanaka; Haruyuki Atomi

  11th International Congress on Extremophiles, 15 Sep. 2016

  
• アーキアを利用した炭化水素生産

  佐藤喬章; 福家翼; Jha Savyasachee; Tansengco Myra; 跡見晴幸

  第68回日本生物工学会大会, Sep. 2016

  
• 超好熱性アーキアThermococcus kodakarensisにおけるCys生合成経路の解明

  佐藤喬章; 牧野勇樹; 川村弘樹; 今中忠行; 跡見晴幸

  日本農芸化学会2016年度大会, Mar. 2016

  
• 超好熱性アーキアにおける新規ペントース代謝経路の同定

  佐藤 喬章

  第16回極限環境生物学会, 09 Nov. 2015, Invited

  
• 超好熱性アーキアThermococcus kodakarensisにおける多糖分解経路の遺伝学的解析

  佐藤喬章; 白石拓也; 松原光平; Siebers Bettina; 跡見晴幸

  第67回日本生物工学会大会, Oct. 2015

  
• Identification of a novel cysteine biosynthetic pathway in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Yuki Makino; Hiroki Kawamura; Tadayuki Imanaka; Haruyuki Atomi

  The 18th Japanese-German Workshop on Enzyme Technology, 14 Sep. 2015

  
• 好塩性アーキアにおける新規糖代謝経路の同定

  佐藤喬章; 法土咲菜恵; 吉井祐太; 野口綾子; 真鍋良幸; 深瀬浩一; 跡見晴幸

  日本Archaea研究会28回講演会, 23 Jul. 2015

  
• Identification of a novel cysteine biosynthetic pathway in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Yuki Makino; Hiroki Kawamura; Tadayuki Imanaka; Haruyuki Atomi

  American Society for Microbiology 115th General Meeting, Jun. 2015

  
• 好塩性アーキアにおける新規糖代謝経路の解明

  佐藤喬章; 法土咲菜恵; 吉井祐太; 跡見晴幸

  日本農芸化学会2015年度大会, 27 Mar. 2015

  
• 超好熱性アーキアThermococcus kodakarensisにおけるribokinase family タンパク質の機能解明

  佐藤喬章; 青野陸; 藤橋雅宏; 宮本幸花; 桑田啓子; 日下絵里子; 藤田春雄; 三木邦夫; 今中忠行; 跡見晴幸

  第66回日本生物工学会大会, 10 Sep. 2014

  
• Novel metabolic pathways in Archaea

  Takaaki Sato; Riku Aono; Sanae Hodo; Yuta Yoshii; Tadayuki Imanaka; Haruyuki Atomi

  2014 Korean Society for Microbiology and Biotechnology International Symposium & Annual Meeting, 25 Jun. 2014, Invited

  
• Functional characterization of three ribokinase family proteins in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Riku Aono; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Tadayuki Imanaka; Haruyuki Atomi

  American Society for Microbiology 114th General Meeting, 18 May 2014

  
• 超好熱性アーキアThermococcus kodakarensisにおける新規Cys生合成経路の同定

  佐藤喬章; 牧野勇樹; 川村弘樹; 今中忠行; 跡見晴幸

  第8回 日本ゲノム微生物学会年会, Mar. 2014

  
• 超好熱性アーキアThermococcus kodakarensisにおける新規Cys生合成経路の同定

  佐藤喬章; 牧野勇樹; 川村弘樹; 今中忠行; 跡見晴幸

  第14回極限環境生物学会, Oct. 2013

  
• Functional characterization of ribokinase family proteins in the hyperthermophilic archaeon Thermococcus kodakarensis

  Takaaki Sato; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Haruyuki Atomi

  Thermophiles2013, 10 Sep. 2013

  
• 超好熱性アーキアThermococcus kodakarensisにおける新規ADP-dependent Ser kinaseの同定

  佐藤喬章; 牧野勇樹; 今中忠行; 跡見晴幸

  第65回日本生物工学会大会, Sep. 2013

  
• 超好熱性アーキアThermococcus kodakarensisにおける3つのribokinase familyタンパク質の機能解析

  佐藤喬章; 青野陸; 藤橋雅宏; 宮本幸花; 桑田啓子; 日下絵里子; 藤田春雄; 三木邦夫; 今中忠行; 跡見晴幸

  日本Archaea研究会第26回講演会, 20 Jul. 2013

  
• 超好熱性アーキアThermococcus kodakarensis由来リボキナーゼファミリータンパク質TK2285の機能解析

  佐藤喬章; 藤橋雅宏; 宮本幸花; 三木邦夫; 跡見晴幸

  日本農芸化学会2013年度大会, 25 Mar. 2013

  
• Functional Characterization of Three Ribokinase Homologs on the Genome of the Hyperthermophilic Archaeon Thermococcus kodakarensis

  Takaaki Sato; Riku Aono; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Haruyuki Atomi

  Biotechnology and Chemistry for GREEN GROWTH, 11 Mar. 2013, Invited

  
• 超好熱性アーキア由来ribokinase familyタンパク質の機能解析

  佐藤喬章; 藤橋雅宏; 宮本幸花; 桑田啓子; 日下絵里子; 藤田春雄; 三木邦夫; 跡見晴幸

  第7回ゲノム微生物学会大会, Mar. 2013

  
• Dynamic, ligand-dependent conformational change triggers the reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis

  Takaaki Sato; Akira Nakamura; Riku Aono; Masahiro Fujihashi; Yosuke Nishiba; Shosuke Yoshida; Ayumu Yano; Tadayuki Imanaka; Kunio Miki; Haruyuki Atomi

  Extremophiles2012, Sep. 2012

  
• Archaea特異的AMP代謝経路の生理的機能の解明

  佐藤喬章; 青野陸; 中村顕; 西谷優一; 藤橋雅宏; 矢野歩; 吉田昭介; 今中忠行; 三木邦夫; 跡見晴幸

  第12回極限環境生物学会, 28 Nov. 2011

  
• Novel enzymes involved in pentose metabolism in the Archaea

  Takaaki Sato; Riku Aono; Akira Nakamura; Yuichi Nishitani; Masahiro Fujihashi; Ayumu Yano; Shosuke Yoshida; Tadayuki Imanaka; Kunio Miki; Haruyuki Atomi

  Japanese-German Workshop on Enzyme Technology, 14 Sep. 2011, Invited

  
• 超好熱性アーキアThermococcus kodakarensisにおけるペントース代謝の解析

  佐藤喬章; 青野陸; 今中忠行; 跡見晴幸

  京都大学微生物科学寄附研究部門 主催シンポジウム, 23 Jun. 2011

  
• Unique metabolism involving archaeal Rubiscos

  Takaaki Sato

  Wageningen University and Research Centre/Kyoto University Joint Workshop, 26 Apr. 2011

  
• Studies on a novel AMP metabolic pathway in Archaea

  Takaaki Sato; Ayumu Yano; Riku Aono; Shosuke Yoshida; Tadayuki Imanaka; Kunio Miki; Haruyuki Atomi

  Extremophiles2010, Sep. 2010

  
• Construction of a gene disruption system by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1

  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka

  Thermophiles2003, 18 Sep. 2003

  

Books and Other Publications

• 応用微生物学第4版

  佐藤喬章, Contributor, 第5章 微生物の代謝 8.生体主要成分の生合成 2)核酸

  文永堂出版, Mar. 2025

  Find Kyoto University's collection of books :

  
• 独立栄養微生物によるCO2資源化技術

  佐藤喬章、跡見晴幸, Joint work, 3章 育種法 「メタン生成菌・水素細菌・藍藻などで利用されている遺伝子操作の方法論」

  シーエムシー出版, Dec. 2023

  Find Kyoto University's collection of books :

  
• アーキア生物学

  佐藤 喬章, Joint work, アーキアにおける物質変換 生体分子生合成 6章2.1節, 2.2節, 2.3(1)節、pp. 137-144

  共立出版, Oct. 2017, Not refereed

  
• 極限環境の生体分子

  佐藤喬章; 跡見晴幸, Joint work, “超好熱菌のゲノム情報とポストゲノム研究の展開”, pp. 40-49

  化学同人, Nov. 2014, Not refereed

  
• Thermophilic Microbes in Environmental and Industrial Biotechnology, Second Edition

  Sato T; Atomi H, Joint work, “Genomics of Thermophilic Bacteria and Archaea”, pp. 307-330

  Springer, 2013, Not refereed

  
• 超好熱菌ゲノム情報に基づいた新規代謝酵素・経路の解明

  跡見晴幸; 佐藤喬章; 横大路裕介; 今中忠行

  酵素利用技術大系、第5編 第5章 第2節, 510-517,, 2010, Not refereed

  
• Microbial inorganic carbon fixation

  Sato, T; Atomi, H

  Encyclopedia of Life Sciences, 2010, Not refereed

  

Awards

• 18 Sep. 2003

  Thermophiles2013, Best Poster Award
• 09 Nov. 2015

  極限環境生物学会, 極限環境生物学会・研究奨励賞
• 20 Sep. 2018

  Extremophiles2018, Best Poster Award
• 14 Jun. 2019

  一般財団法人　天野エンザイム科学技術振興財団, 第二十回酵素応用シンポジウム研究奨励賞
• 01 Nov. 2019

  酵素工学研究会, 酵素工学奨励賞
• 14 Dec. 2019

  日本農芸化学会, 日本農芸化学会　優秀発表

External funds: Kakenhi

• Functional elucidation of the AMP metabolic pathway in Archaea

  Grant-in-Aid for Young Scientists (B)

  Kyoto University

  Takaaki SATO

  From 01 Apr. 2010, To 31 Mar. 2012, Project Closed

  アーキア;微生物代謝;ペントース代謝;AMP;バイオテクノロジー;核酸代謝;ヌクレオシド代謝

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22750150/
• Identification of the physiological role of inositol kinase and inositol monophosphate in Archaea

  Grant-in-Aid for Young Scientists (B)

  Kyoto University

  Takaaki Sato

  From 01 Apr. 2014, To 31 Mar. 2017, Project Closed

  Inositol;Kinase;Archaea;Hyperthermophile;イノシトール;キナーゼ;アーキア;高温ストレス適応;適合溶質;高温ストレス応答;inositol;イノシトールキナーゼ;代謝;遺伝子破壊;反応産物同定;発現活性化条件同定;微生物

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-26850049/
• Identification of the nucleoside degradation system in Archaea

  Grant-in-Aid for Scientific Research (C)

  Basic Section 38020:Applied microbiology-related

  Kyoto University

  Takaaki Sato

  From 01 Apr. 2018, To 31 Mar. 2022, Project Closed

  アーキア;ヌクレオシド;代謝;酵素;好塩菌

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-18K05411/
• 腸内細菌における葉酸生合成経路の全容解明

  Grant-in-Aid for Scientific Research (C)

  Basic Section 38020:Applied microbiology-related

  Kyoto University

  佐藤 喬章

  From 01 Apr. 2023, To 31 Mar. 2026, Granted

  葉酸生合成;腸内細菌;代謝;ビフィズス菌;補酵素

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-23K04991/

External funds: others

• Identification of the function of a sugar kinase from halophilic archaea

  野田産研研究助成（奨励研究助成）

  From 01 Apr. 2011, To 31 Mar. 2012

  佐藤喬章
• 超好熱性アーキアにおける補酵素リポ酸の生合成経路の解明 ～補酵素から探る原始的代謝～

  京都大学教育研究振興財団 研究活動推進助成

  From 01 Apr. 2017, To 31 Mar. 2018

  佐藤喬章
• 超好熱性アーキアにおけるリポ酸生合成経路の全容解明

  豊田理研スカラー

  From 01 Apr. 2019, To 31 Mar. 2020

  佐藤喬章
• バイオ－有機－無機複合触媒システムのマルチスケール設計

  豊田理研スカラー共同研究（Phase 1）

  From 01 Nov. 2019, To 31 Mar. 2019

  佐藤喬章
• 多階層設計による複合ナノ粒子触媒の創出

  豊田理研スカラー共同研究（Phase 2）

  From 01 Apr. 2020, To 31 Mar. 2020

  佐藤喬章
• ナノ粒子触媒による酵素反応場の革新

  京都大学, 融合チーム研究プログラム（京都大学SPIRITS）

  From 01 Apr. 2021, To 31 Mar. 2023
• アーキアにおける脂肪酸生合成機構の解明と機能性脂肪酸の合成

  日本応用酵素協会, 酵素研究助成

  From 01 May 2021, To 30 Sep. 2022
• ルビスコ様タンパク質の機能解明と新規炭酸固定酵素の開発

  一般財団法人　有機合成化学研究所, 研究助成

  From 01 Oct. 2021, To 30 Sep. 2022
• 悪玉腸内細菌における機能未知キナーゼの解析

  一般財団法人 杉山産業化学研究所, 研究助成

  From 01 Apr. 2023, To 31 Mar. 2024
• クロストリジウム属の葉酸⽣合成におけるミッシン グエンザイムの同定

  公益財団法人発酵研究所, 一般研究助成

  From 01 Apr. 2023, To 31 Mar. 2025

  佐藤喬章
• バイオインフォマティクスと生化学の融合による難培養微生物の代謝系解明

  公益財団法人 旭硝子財団, 研究奨励

  From 01 Apr. 2023, To 31 Mar. 2025

  佐藤喬章

Education

Teaching subject(s)

• From 01 Apr. 2024, To 31 Mar. 2025

  Basic Biochemistry II

  7064, Fall, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Biochemical Engineering

  7030, Fall, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Basic Biochemistry I (Advanced Chemistry)

  7416, Spring, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Biological Chemistry 2 Continued

  P836, Spring, Graduate School of Engineering, 1
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Biological Chemistry

  H836, Spring, Graduate School of Engineering, 3
• From 01 Apr. 2023, To 31 Mar. 2024

  Basic Biochemistry I (Advanced Chemistry)

  7416, Spring, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Basic Biochemistry II

  7064, Fall, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Biochemical Engineering

  7030, Fall, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Advanced Biological Chemistry 2 Continued

  P836, Spring, Graduate School of Engineering, 1
• From 01 Apr. 2023, To 31 Mar. 2024

  Microbiology and Biotechnology

  H817, Spring, Graduate School of Engineering, 1.5
• From 01 Apr. 2023, To 31 Mar. 2024

  Microbiology and Biotechnology

  H816, Spring, Graduate School of Engineering, 1.5
• From 01 Apr. 2023, To 31 Mar. 2024

  Advanced Biological Chemistry

  H836, Spring, Graduate School of Engineering, 3
• From 01 Apr. 2022, To 31 Mar. 2023

  Basic Biochemistry I (Advanced Chemistry)

  7416, Spring, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Chemical Basis of Life(Advanced Chemistry)

  7426, Fall, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Basic Biochemistry II

  7064, Fall, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Advanced Biological Chemistry 2 Continued

  P836, Spring, Graduate School of Engineering, 1
• From 01 Apr. 2022, To 31 Mar. 2023

  Biochemical Engineering

  7030, Fall, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Advanced Biological Chemistry

  H836, Spring, Graduate School of Engineering, 3
• From 01 Apr. 2021, To 31 Mar. 2022

  Basic Biochemistry II

  Fall
• From 01 Apr. 2021, To 31 Mar. 2022

  Biochemical Engineering

  Fall
• From 01 Apr. 2021, To 31 Mar. 2022

  Chemical Basis of Life

  Fall
• From 01 Apr. 2021, To 31 Mar. 2022

  Microbiology and Biotechnology

  Fall
• From 01 Apr. 2021, To 31 Mar. 2022

  Microbiology and Biotechnology

  Fall
• From Apr. 2020, To Mar. 2021

  Fundamental Chemical Experiments

  Spring, 全学共通科目

Academic, Social Contribution

Committee Memberships

• From Jan. 2023, To Present

  幹事, 酵素工学研究会
• From Jun. 2021, To Present

  関西支部 支部幹事（企画）, 日本生物工学会
• From Jan. 2018, To Dec. 2021

  シンポジウム委員, 極限環境生物学会
• From Jun. 2013, To May 2019

  和文誌編集委員, 日本生物工学会