Basic Information

Faculty

• 理学部

Professional Memberships

• From Jul. 2020, To Present

  The Genetics Society of Japan
• From Jan. 2014, To Present

  Japan Society for Bioscience, Biotechnology, and Agrochemistry
• From Jan. 2010, To Present

  Japanese Society of Phycology
• From Jan. 1983, To Dec. 2009

  The Molecular Biology Society of Japan
• From Jan. 1989, To Dec. 2000

  The Botanical Society of Japan

Academic Degree

• 理学修士(京都大学)
• 理学博士(京都大学)

Academic Resume (Graduate Schools)

• 京都大学, 大学院理学研究科博士後期課程生物物理学専攻, 修了
• 京都大学, 大学院理学研究科修士課程生物物理学専攻, 修了

Academic Resume (Undergraduate School/Majors)

• 京都大学, 理学部, 卒業

High School

• High School

  群馬県立前橋高等学校

Research History

• From Apr. 2007, To Present

  京都大学大学院生命科学研究科, 准教授
• From 1999, To Mar. 2007

  京都大学大学院生命科学研究科, 助教授
• From 1994, To 1999

  Kyoto University, Graduate School of Science, 講師
• From Aug. 1998, To Dec. 1998

  Washington University in St. Louis, Visiting Professor
• From 1993, To 1994

  Kyoto University, Faculty of Science
• From 1989, To 1993

  National Institute for Basic Biology

Language of Instruction

• English
• Japanese

ID,URL

• J-Global ID

  200901005361198409

Website(s) (URL(s))

• http://kuchem.kyoto-u.ac.jp/seika/shiraishi/

researchmap URL

• https://researchmap.jp/h_shiraishi

Research

Research Topics, Overview of the research

• Research Topics

  We are focusing on developing tools and technologies for molecular genetic study of the cyanobacterium Arthrospira platensis, which is a filamentous alkalophilic cyanobacterium that has been traditionally consumed as food by people living along the shores of alkaline lakes in several regions in the world.

• Overview of the research

  I am investigating the mechanism of growth, development and evolution of multicellular organisms using a green alga, Volvox carteri, and its close relatives. Volvox carteri is a multicellular organism consisting of only two cell types, 12-16 reproductive cells called gonidia and about 2000 somatic cells. To understand the mechanism of the evolution of multicellularity, we have been analyzing genes and gene products that function in characteristic developmental events of Volvox that include release of young organisms from parental spheroids, programed cell death of somatic cells and maturation of gamete during sexual life cycle. An edible cyanobacterium, Arthrospira (Spirulina) platensis, is also used for research in our laboratory. It has tremendous potential as a carbon-neutral source of nutrients and useful organic compounds. We are currently focusing on developing tools and technologies for molecular genetic study of

Research Interests

• Arthrospira
• Spirulina
• 分子生物学
• Molecular Biology

Research Areas

• Life sciences, Molecular biology

Papers

• The use of a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide–based colorimetric assay in the viability analysis of the filamentous cyanobacterium Arthrospira platensis

  Hideaki Shiraishi; Akiko Toyoda

  Bioscience, Biotechnology, and Biochemistry, 24 Feb. 2021, Peer-reviewed, Lead author, Corresponding author

  
• Growth of the edible microalga Arthrospira platensis in relation to boron supply.

  S. Tadama; H. Shiraishi

  International Journal of GEOMATE, Feb. 2017, Peer-reviewed

  
• Cryopreservation of the edible alkalophilic cyanobacterium Arthrospira platensis

  Hideaki Shiraishi

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2016, Peer-reviewed

  
• Association of heterotrophic bacteria with aggregated Arthrospira platensis exopolysaccharides: implications in the induction of axenic cultures

  Hideaki Shiraishi

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Feb. 2015, Peer-reviewed

  
• The AplI Restriction-Modification System in an Edible Cyanobacterium, Arthrospira (Spirulina) platensis NIES-39, Recognizes the Nucleotide Sequence 5 '-CTGCAG-3 '

  Hideaki Shiraishi; Yosuke Tabuse

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Apr. 2013, Peer-reviewed

  
• Hatching enzyme of Volvox: a possible implication in the evolution of multicellularity.

  H. Shiraishi

  Journal of Biochemical Technology, 1, 21-22., 2008, Peer-reviewed, Invited

  
• A posttranslationally regulated protease, VheA, is involved in the liberation of juveniles from parental spheroids in Volvox carteri

  Kazutake Fukada; Tan Inoue; Hideaki Shiraishi

  PLANT CELL, Oct. 2006, Peer-reviewed

  
• Genes specifically expressed in sexually differentiated female spheroids of Volvox carteri

  N Aono; T Inoue; H Shiraishi

  JOURNAL OF BIOCHEMISTRY, Oct. 2005, Peer-reviewed

  
• snoRNA

  白石 英秋

  生化学, 77, 448., 2005, Invited

  
• Erratum: Generation of a catalytic module on a self-folding RNA (RNA (2004) 10 (1900-1906))

  Yoshioka W; Ikawa Y; Jaeger L; Shiraishi H; Inoue T

  RNA, 2005, Peer-reviewed

  
• Non-coding RNA: 遺伝子発現と進化

  白石英秋

  蛋白質 核酸 酵素, Dec. 2004, Invited

  
• Generation of a catalytic module on a self-folding RNA

  W Yoshioka; Y Ikawa; L Jaeger; H Shiraishi; T Inoue

  RNA-A PUBLICATION OF THE RNA SOCIETY, Dec. 2004, Peer-reviewed

  
• Artificial modules for enhancing rate constants of a group I intron ribozyme without a P4-P6 core element

  SJ Ohuchi; Y Ikawa; H Shiraishi; T Inoue

  JOURNAL OF BIOLOGICAL CHEMISTRY, Jan. 2004, Peer-reviewed

  
• Selections for constituting new RNA-protein interactions in catalytic RNP

  S Atsumi; Y Ikawa; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, Jan. 2003, Peer-reviewed

  
• Two conserved structural components, A-rich bulge and P4 XJ6/7 base-triples, in activating the group I ribozymes

  Y Ikawa; T Yoshimura; H Hara; H Shiraishi; T Inoue

  GENES TO CELLS, Dec. 2002, Peer-reviewed

  
• Role of a conserved J8/7 X P4 base-triple in the Tetrahymena ribozyme

  Y Ohki; Y Ikawa; H Shiraishi; T Inoue

  JOURNAL OF BIOCHEMISTRY, Nov. 2002, Peer-reviewed

  
• Modular engineering of a Group I intron ribozyme

  SJ Ohuchi; Y Ikawa; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, Aug. 2002, Peer-reviewed

  
• Mispaired P3 region in the hierarchical folding pathway of the Tetrahymena ribozyme

  Y Ohki; Y Ikawa; H Shiraishi; T Inoue

  GENES TO CELLS, Aug. 2002, Peer-reviewed

  
• Palindromic repetitive elements in the mitochondrial genome of Volvox

  N Aono; T Shimizu; T Inoue; H Shiraishi

  FEBS LETTERS, Jun. 2002, Peer-reviewed

  
• Design, construction, and analysis of a novel class of self-folding RNA

  Y Ikawa; K Fukada; S Watanabe; H Shiraishi; T Inoue

  STRUCTURE, Apr. 2002, Peer-reviewed

  
• Relationship between the self-splicing activity and the solidity of the master domain of the Tetrahymena Group I ribozyme

  Y Oe; Y Ikawa; H Shiraishi; T Inoue

  BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Mar. 2002, Peer-reviewed

  
• Cloning and characterization of novel extensin-like cDNAs that are expressed during late somatic cell phase in the green alga Volvox carteri

  T Shimizu; T Inoue; H Shiraishi

  GENE, Feb. 2002, Peer-reviewed

  
• Design and development of a catalytic ribonucleoprotein

  S Atsumi; Y Ikawa; H Shiraishi; T Inoue

  EMBO JOURNAL, Oct. 2001, Peer-reviewed

  
• A senescence-associated S-like RNase in the multicellular green alga Volvox carteri

  T Shimizu; T Inoue; H Shiraishi

  GENE, Aug. 2001, Peer-reviewed

  
• A comparative study on two GNRA-tetraloop receptors: 11-nt and IC3 motifs

  Y Ikawa; K Nohmi; S Atsumi; H Shiraishi; T Inoue

  JOURNAL OF BIOCHEMISTRY, Aug. 2001, Peer-reviewed

  
• Conserved base-pairings between C266-A268 and U307-G309 in the P7 of the Tetrahymena ribozyme is nonessential for the in vitro self-splicing reaction

  Y Oe; Y Ikawa; H Shiraishi; T Inoue

  BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Jun. 2001, Peer-reviewed

  
• Self-splicing of the Tetrahymena group I ribozyme without conserved base-triples

  Y Ikawa; W Yoshioka; Y Ohki; H Shiraishi; T Inoue

  GENES TO CELLS, May 2001, Peer-reviewed

  
• A deteriorated triple-helical scaffold accelerates formation of the Tetrahymena ribozyme active structure

  Y Ohki; Y Ikawa; H Shiraishi; T Inoue

  FEBS LETTERS, Mar. 2001, Peer-reviewed

  
• A simulated molecular evolution from minimal catalytic domain of a group I ribozyme.

  S.J. Ohuchi; Y. Ikawa; H. Shiraishi; T. Inoue

  Nucleic Acids Res Suppl, 2001, Peer-reviewed

  
• Minimal catalytic domain of a group I self-splicing intron RNA

  Y Ikawa; H Shiraishi; T Inoue

  NATURE STRUCTURAL BIOLOGY, Nov. 2000, Peer-reviewed

  
• Structure-function relationships of two closely related group IC3 intron ribozymes from Azoarcus and Synechococcus pre-tRNA

  Y Ikawa; D Naito; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, Sep. 2000, Peer-reviewed

  
• A small structural element, Pc-J5/5a, plays dual roles in a group IC1 intron RNA

  Y Ikawa; H Shiraishi; T Inoue

  BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Jul. 2000, Peer-reviewed

  
• Requirements for alternative forms of the activator domain, P5abc, in the Tetrahymena ribozyme

  Y Naito; H Shiraishi; T Inoue

  FEBS LETTERS, Jan. 2000, Peer-reviewed

  
• Characterization of P8 and J8/7 elements in the conserved core of the Tetrahymena group I intron ribozyme

  Y Ikawa; H Shiraishi; T Inoue

  BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Jan. 2000, Peer-reviewed

  
• A conserved motif in group IC3 introns is a new class of GNRA receptor

  Y Ikawa; D Naito; N Aono; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, Apr. 1999, Peer-reviewed

  
• Trans-activation of the Tetrahymena group I intron ribozyme via a non-native RNA-RNA interaction

  Y Ikawa; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, Apr. 1999, Peer-reviewed

  
• P5abc of the Tetrahymena ribozyme consists of three functionally independent elements

  Y Naito; H Shiraishi; T Inoue

  RNA-A PUBLICATION OF THE RNA SOCIETY, Jul. 1998, Peer-reviewed

  
• Trans-activation of the Tetrahymena ribozyme by its P2-2.1 domains

  Y Ikawa; H Shiraishi; T Inoue

  JOURNAL OF BIOCHEMISTRY, Mar. 1998, Peer-reviewed

  
• Identification of the nucleotides in the A-rich bulge of the Tetrahymena ribozyme responsible for an efficient self-splicing reaction

  Y Ikawa; A Okada; H Imahori; H Shiraishi; T Inoue

  JOURNAL OF BIOCHEMISTRY, Oct. 1997, Peer-reviewed

  
• Long-range interaction between the P2.1 and P9.1 peripheral domains of the tetrahymena ribozyme

  Y Ikawa; H Ohta; H Shiraishi; T Inoue

  NUCLEIC ACIDS RESEARCH, May 1997, Peer-reviewed

  
• Characterization of the newly constructed domains that replace P5abc within the Tetrahymena ribozyme

  Y Ikawa; H Shiraishi; T Inoue

  FEBS LETTERS, Sep. 1996, Peer-reviewed

  
• Genetic analysis of the structure and function of RNase P from E-coli

  H Shiraishi; Y Shimura

  MOLECULAR BIOLOGY REPORTS, 1996, Peer-reviewed

  
• Structure, function and molecular evolution of Group I intron ribozyme.

  Y. Ikawa; Y. Naito; H. Shiraishi; T. Inoue

  Nucleic Acids Symp Ser, 1996, Peer-reviewed

  
• The Tetrahymena ribozyme tolerates diverse activator domains that replace P5abc

  Y Ikawa; H Shiraishi; T Inoue

  TRACING BIOLOGICAL EVOLUTION IN PROTEIN AND GENE STRUCTURES, 1995

  
• 2 AMIDOPHOSPHORIBOSYLTRANSFERASE GENES OF ARABIDOPSIS-THALIANA EXPRESSED IN DIFFERENT ORGANS

  T ITO; H SHIRAISHI; K OKADA; Y SHIMURA

  PLANT MOLECULAR BIOLOGY, Oct. 1994, Peer-reviewed

  
• GENETIC COMPLEMENTATION OF A FLORAL HOMEOTIC MUTATION, APETALA3, WITH AN ARABIDOPSIS-THALIANA GENE HOMOLOGOUS TO DEFICIENS OF ANTIRRHINUM-MAJUS

  H OKAMOTO; A YANO; H SHIRAISHI; K OKADA; Y SHIMURA

  PLANT MOLECULAR BIOLOGY, Oct. 1994, Peer-reviewed

  
• NUCLEOTIDE-SEQUENCE OF A TRANSMEMBRANE PROTEIN (TMP-C) CDNA IN ARABIDOPSIS-THALIANA

  T KINOSHITA; HARANISHIMURA, I; H SIRAISHI; K OKADA; Y SHIMURA; M NISHIMURA

  PLANT PHYSIOLOGY, Aug. 1994, Peer-reviewed

  
• NUCLEOTIDE-SEQUENCES RECOGNIZED BY THE AGAMOUS-MADS DOMAIN OF ARABIDOPSIS-THALIANA IN-VITRO

  H SHIRAISHI; K OKADA; Y SHIMURA

  PLANT JOURNAL, Aug. 1993, Peer-reviewed

  
• PROTEINS INDUCED BY PHYSICAL STIMULI IN ROOT-TIPS OF ARABIDOPSIS-THALIANA SEEDLINGS

  K SAKAMOTO; H SHIRAISHI; K OKADA; Y SHIMURA

  PLANT AND CELL PHYSIOLOGY, Mar. 1993, Peer-reviewed

  
• THE GENE AND THE RNA FOR THE PRECURSOR TO THE PLASTID-LOCATED GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE OF ARABIDOPSIS-THALIANA

  NISHIDA, I; Y TASAKA; H SHIRAISHI; N MURATA

  PLANT MOLECULAR BIOLOGY, Jan. 1993, Peer-reviewed

  
• EFFICIENT TRANSFORMATION OF ARABIDOPSIS-THALIANA - COMPARISON OF THE EFFICIENCIES WITH VARIOUS ORGANS, PLANT ECOTYPES AND AGROBACTERIUM STRAINS

  K AKAMA; H SHIRAISHI; S OHTA; K NAKAMURA; K OKADA; Y SHIMURA

  PLANT CELL REPORTS, Dec. 1992, Peer-reviewed

  
• A CDNA CLONE ENCODING HBP-1B HOMOLOG IN ARABIDOPSIS-THALIANA

  T KAWATA; T IMADA; H SHIRAISHI; K OKADA; Y SHIMURA; M IWABUCHI

  NUCLEIC ACIDS RESEARCH, Mar. 1992, Peer-reviewed

  
• 花の器官発生を制御する遺伝子.

  白石英秋

  細胞, 24, 160-164,, 1992

  
• 花の器官形成の遺伝的制御.

  白石英秋

  Plant Science Tomorrow (Plant Science Tomorrow 刊行会), 6, 6-7., 1992

  
• アラビドプシスとその変異体

  白石英秋; 岡田清孝; 志村令郎

  現代化学増刊, Sep. 1991

  
• 第４回アラビドプシス研究会議.

  白石英秋

  学術月報, 43, 949-950., 1990, Invited

  
• Random introduction of localized single nucleotide substitutions into cloned DNA.

  H. Shiraishi; Y. Shimura

  DNA and Protein Engineering Techniques, 1990, Peer-reviewed, Invited

  
• GENETICS OF TRANSFER-RNA PROCESSING IN ESCHERICHIA-COLI

  Y SHIMURA; H SHIRAISHI

  METHODS IN ENZYMOLOGY, 1990, Peer-reviewed

  
• THE GENOMIC GENE AND CDNA FOR THE PLASTIDIAL GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE OF ARABIDOPSIS

  NISHIDA, I; Y TASAKA; H SHIRAISHI; K OKADA; Y SHIMURA; T BEPPU; N MURATA

  PLANT LIPID BIOCHEMISTRY, STRUCTURE AND UTILIZATION, 1990, Peer-reviewed

  
• FUNCTIONAL DOMAINS OF THE RNA COMPONENT OF RIBONUCLEASE-P REVEALED BY CHEMICAL PROBING OF MUTANT RNAS

  H SHIRAISHI; Y SHIMURA

  EMBO JOURNAL, Dec. 1988, Peer-reviewed

  
• A RAPID AND EFFICIENT METHOD FOR TARGETED RANDOM MUTAGENESIS

  H SHIRAISHI; Y SHIMURA

  GENE, Apr. 1988, Peer-reviewed

  
• MUTATIONS AFFECTING 2 DISTINCT FUNCTIONS OF THE RNA COMPONENT OF RNASE-P

  H SHIRAISHI; Y SHIMURA

  EMBO JOURNAL, Dec. 1986, Peer-reviewed

  
• tRNA生合成およびプロセシング

  白石英秋; 志村令郎

  細胞工学, Mar. 1986

  
• Aspects of RNA catalysis in RNA processing.

  Y Shimura; H Shiraishi; H Sakamoto

  Advances in biophysics, 1986, Peer-reviewed, Invited

  

Misc.

• 藍藻 Arthrospira platensis（スピルリナ）の実験系の整備とその代表的な可視突然変異

  白石英秋; 木村仁美; 高井舞香

  日本遺伝学会第92回大会（2020年9月16-18日）, Sep. 2020, Peer-reviewed

  
• 食用藍藻 Arthrospira platensis の持つ DNA 分解酵素の解析

  林 翔太; 白石 英秋

  日本藻類学会第43回大会（京都、2019.3.16-17）（藻類, 67(1), 69 (2019)）, Mar. 2019, Peer-reviewed

  
• Arthrospira platensis の細胞抽出液に含まれるDNA分解酵素の解析

  林翔太; 白石英秋

  京都大学植物縦横無尽の会 第14回ワークショップ（京都、2018年10月10日）, Oct. 2018

  
• Does Arthrospira platensis have strong non-specific deoxyribonucleases?

  Hayashi Shota; SHIRAISHI Hideaki

  The 17th Joint Mini-Symposium on Molecular and Cell Biology among National Taiwan University, the University of Tsukuba, and Kyoto U (Kyoto, Japan; June 30, 2018), Jun. 2018

  
• らせん状藍藻 Arthrospira platensis の滑走運動における螺旋形態の役割

  白石英秋; 笹瀬茉莉; 坂井田彩野

  日本藻類学会第42回大会（仙台、2018年3月24-25日）, Mar. 2018, Peer-reviewed

  
• シアノバクテリア Arthrospira platensis の滑走運動における個体の螺旋形態の役割

  白石英秋; 坂井田彩野

  2017年 生体運動研究合同班会議（神戸, 2017年1月6-8日）, Jan. 2017

  
• Growth of the edible alkalophilic alga Arthrospira platensis in relation to boron.

  Tadama Shotaro; SHIRAISHI Hideaki

  The Second International Conference on Science, Engineering and Environment (Tsu, Japan; Nov. 21-23, 2016), Nov. 2016, Peer-reviewed

  
• 食用藍藻 Arthrospira platensis の実験手法の整備 ― 無菌化と凍結保存法を中心に ―

  白石 英秋

  ラン藻ゲノム交流会（東大駒場キャンパス, 2016.6.25）, Jun. 2016, Invited

  
• Cryopreservation of the edible filamentous cyanobacterium Arthrospira platensis

  SHIRAISHI Hideaki

  12th Workshop on Cyanobacteria (Tempe, U.S.A: May 19–22, 2016)), May 2016, Peer-reviewed

  
• Arthrospira属の食用シアノバクテリアの凍結保存方法

  白石英秋; 田玉翔太郎; 廣田翔平; 坂井田彩野

  日本農芸化学会2016年度大会（札幌コンベンションセンター, 2016.3.27〜30）, Mar. 2016, Peer-reviewed

  
• 食用藍藻 Arthrospira（スピルリナ）の種々の株における，凍結保存の至適条件の多様性

  白石英秋

  日本藻類学会第40回大会（日本歯科大学、東京、2016.3.19–20）（藻類, 64(1), 84 (2016)）, Mar. 2016, Peer-reviewed

  
• 繊維状シアノバクテリア Arthrospira platensis の滑走運動の解析

  坂井田彩野; 白石英秋

  第38回日本分子生物学会年会（神戸ポートアイランド, 2015.12.1〜4）, Dec. 2015, Peer-reviewed

  
• Towards genetic manipulation of the edible cyanobacterium Arthrospira platensis: Axenic culture production, clonal manipulation, and cryopreservation

  SHIRAISHI Hideaki

  15th International Symposium on Phototrophic Prokaryotes (Tübingen, Germany: Aug. 2-6, 2015), Aug. 2015, Peer-reviewed

  
• 藍藻に特有の新規NADP還元酵素の解析

  濱口朋江; 廣田翔平; 白石英秋

  日本藻類学会第39回大会（九州大学箱崎キャンパス, 2015.3.21〜22）（藻類, 63(1), 71 (2016)）, Mar. 2015, Peer-reviewed

  
• Exopolysaccharides produced by Arthrospira (Spirulina) platensis and their implications in the induction of axenic cultures

  SHIRAISHI Hideaki

  5th Congress of the International Society for Applied Phycology (Sydney, June 22-26, 2014), Jun. 2014, Peer-reviewed

  
• 藍藻 Arthrospira (Spirulina) が培養液中に産生する細胞外多糖凝集体と細菌との会合：無菌系統作出の際の新視点

  白石英秋

  日本藻類学会第38回大会（東邦大学習志野キャンパス, 2014.3.14〜16; 要旨集 p. 54 (B28)）（藻類, 62(1), 54）, Mar. 2014, Peer-reviewed

  
• 食用藍藻 Arthrospira (Spirulina) platensis の無菌化における問題点の解消

  白石英秋

  第10回クラミドモナス研究会「微細藻研究のブレイクスルー」（基礎生物学研究所, 2013.11.29〜30; 要旨集 p. 21 (P19)）, 29 Nov. 2013

  
• Arthrospira platensis の迅速な無菌化法

  白石英秋

  ラン藻の分子生物学 2013 〜多様化するラン藻研究：収斂から拡散へ〜（かずさアカデミアホール, 2013.11.22〜23; 要旨集 p. 25 (P-23)）, 22 Nov. 2013

  
• 糸状性藍藻 Arthrospira platensis の突然変異

  白石英秋

  NGS現場の会 第三回研究会（神戸国際会議場, 2013.9.4〜2013.9.5； 要旨集 p. 69 (2-99-B)）, Sep. 2013, Peer-reviewed

  
• Analysis of restriction-modification systems in Arthrospira platensis NIES-39.

  Shiraishi, H

  ESF-EMBO Symposium, Molecular bioenergetics of cyanobacteria: Shaping the environment (Pultusk, Poland; Apr. 15-20, 2013), 17 Apr. 2013, Peer-reviewed

  
• 食用藍藻 Arthrospira (Spirulina) platensis NIES-39 の制限修飾系 Apl I の解析

  白石英秋; 田伏洋介

  日本農芸化学会2013年度大会（東北大学, 2013年3月24-28日）, 26 Mar. 2013, Peer-reviewed

  
• 藍藻 Arthrospira platensis（スピルリナ）の制限修飾系の解析

  白石英秋; 田伏洋介

  日本藻類学会第37回大会（山梨大学, 2013.3.27〜2013.3.29）（藻類, 61(1), p. 62 (2013)）, Mar. 2013, Peer-reviewed

  
• ボルボックスがおこなうタンパク質の分泌生産

  白石英秋

  第10回 自然に学ぶものづくりフォーラム, Oct. 2012, Invited

  
• ラン藻のモリブデン補因子の生合成系遺伝子の解析

  白石英秋

  ラン藻の分子生物学 2011 〜ゲノム15年：これからのラン藻研究〜（2011年12月2-3日、木更津）, Dec. 2011, Peer-reviewed

  
• Arthrospira platensis(スピルリナ)の制限修飾系酵素の解析

  田伏洋介; 井上丹; 白石英秋

  第34回日本分子生物学会年会, Dec. 2011, Peer-reviewed

  
• Generation of a catalytic module on a self-folding RNA (vol 10, pg 1900, 2004)

  W Yoshioka; Y Ikawa; L Jaeger; H Shiraishi; T Inoue

  RNA-A PUBLICATION OF THE RNA SOCIETY, Jan. 2005

  

Presentations

• 食品に適した藻類とその培養技術

  白石英秋

  次世代タンパク質に向けたフードテックの市場・技術動向, 15 Feb. 2021, 技術情報協会, Invited

  
• 食用藍藻 Arthrospira（スピルリナ）の培養と遺伝的取扱い

  白石 英秋

  藍藻の分子生物学2019, 30 Nov. 2019, かずさDNA研究所, Invited

  
• アフリカ産のシアノバクテリアの現在・過去・未来

  白石 英秋

  京都大学植物縦横無尽の会 第14回ワークショップ, 10 Oct. 2018, 京都大学植物縦横無尽の会, Invited

  
• スピルリナ（食用シアノバクテリア Arthrospira）の実験系としての整備：無菌化、凍結保存、細胞運動

  白石 英秋

  アドバンス生命理学特論, 10 Mar. 2017, 名古屋大学大学院理学研究科, Invited

  
• 仮説、モデル、対照実験

  「生物科学セミナーIII」講演会, 28 Nov. 2011, 島根大学生物資源科学部生物科学科, Invited

  

Books and Other Publications

• バイオ研究のための実験デザイン

  白石英秋

  メディカル・サイエンス・インターナショナル, 2011, Not refereed

  
• ノーベル賞の生命科学入門 RNAが拓く新世界（菊池洋編）

  白石英秋

  講談社（第５章「RNA酵素の発見」を執筆）, 2009, Not refereed

  
• RNAi（G. J. Hannon 編、日本語版監修 中村義一）

  白石 英秋

  メディカル・サイエンス・インターナショナル, 2004, Not refereed

  
• 「フライフェルダー 分子生物学（上・下）」（志村令郎ほか訳）

  白石 英秋

  化学同人, 1989, Not refereed

  

Awards

• 22 Nov. 2016

  The GEOMATE International Society, Best Paper Award (The Second International Conference on Science, Engineering and Environment)

External funds: Kakenhi

• Elucidation of the amphibious locomotion system of multicellular cyanobacteria

  Grant-in-Aid for Challenging Research (Exploratory)

  Medium-sized Section 44:Biology at cellular to organismal levels, and related fields

  Kyoto University

  Hideaki Shiraishi

  From 29 Jun. 2018, To 31 Mar. 2021, Project Closed

  細胞運動;シアノバクテリア;微細藻;スピルリナ;微生物;突然変異;原核生物

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-18K19338/
• Possible scavenging pathway for alkane synthesis in cyanobacteria

  Grant-in-Aid for Challenging Exploratory Research

  Kyoto University

  Hideaki Shiraishi

  From 01 Apr. 2014, To 31 Mar. 2017, Project Closed

  シアノバクテリア;酸化還元酵素;ギ酸;ニコチンアミドアデニンジヌクレオチドリン酸

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-26660063/
• Researches on ribozymes at molecular and atomic level

  Grant-in-Aid for Scientific Research on Priority Areas (A)

  Kyoto University

  Tan INOUE

  Project Closed

  RNA;リボザイム;グループIイントロン;分子デザイン;ハンマーヘッド型リボザイム;snRNP;リボソーム;スプライソソーム;ヘアピン型リボザイム;ンマーヘッド型リボザイム;G167;GNRA-receptor 4;マキシザイム;U6snRNA;RNase P;23SリボソームRNA;酵素;分子設計;反応機構;スプライシング;catalyticRNA, RNA;ribozyme;catakytic RNA;snRNA;RNP;group I introns;hammerhead ribozyme;splicing

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-09278103/
• ボルボックスを用いた多細胞体制構築機構の分子遺伝学的研究

  Grant-in-Aid for Exploratory Research

  Kyoto University

  白石 英秋

  Project Closed

  ボルボックス;体細胞;生殖細胞;ミトコンドリア;プロテインキナーゼ;多細胞生物;突然変異体;プロテイン・キナーゼ

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-08878135/
• Experimental simulation on molecular evolution of RNA enzymes (ribozymes)

  Grant-in-Aid for Scientific Research (B)

  KYOTO UNIVERSITY

  Tan INOUE

  Project Closed

  RNA;リボザイム;酵素;テトラヒメナ;in vitro selection;分子進化, RNA;ribozyme;enzyme;Tetrahymena;in vitro selection

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-07458179/
• グループII・イントロンの機能構造の研究

  Grant-in-Aid for Scientific Research on Priority Areas

  Kyoto University

  白石 英秋

  Project Closed

  グループIIイントロン;RNA;リボザイム

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-07250212/
• シロイヌナズナの突然変異体を用いた雄蘂形成過程の研究

  Grant-in-Aid for Encouragement of Young Scientists (A)

  Kyoto University

  白石 英秋

  Project Closed

  雄しべ;シロイヌナズナ;突然変異体

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-06740598/
• グループII・イントロンの機能構造の研究

  Grant-in-Aid for Scientific Research on Priority Areas

  Kyoto University

  白石 英秋

  Project Closed

  グループIIイントロン;スプライシング;分子生物学

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-06258210/
• Characterization of genes regulating flower-development in Arabidopsis thaliana.

  Grant-in-Aid for international Scientific Research

  Okazaki National Institutes

  Kiyokata OKADA

  Project Closed

  植物器官発生;遺伝子解析;シロイヌナズナ;形質転換;突然変異体;オメオティック突然変異;トランスジェニック植物;DNAデータベース;ホメオティック突然変異, plant floral organogenesis;gene analysis;Arabidopsis thaliana;transformation;mutant;homeotic mutation;transgenic plants;DNA database

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-03044151/

External funds: others

• ボルボックスに学ぶ光合成によるタンパク質分泌生産

  積水化学・自然に学ぶものづくり研究助成プログラム

  From Sep. 2009, To Oct. 2010

  白石英秋

Education

Teaching subject(s)

• Biochemistry Seminar
• From 01 Apr. 2011, To 31 Mar. 2012

  Experimental Course of Chemistry

  Year-long, 理学部
• Contemporary Chemistry Seminar
• From Apr. 2011, To Mar. 2012

  Molecular Genetics I

  Fall, 理学部
• From Apr. 2011, To Mar. 2012

  化学課題研究１７

  Year-long, 理学部
• 教職総合演習
• From Apr. 2012, To Mar. 2013

  Molecular Genetics I

  Fall, 理学部
• From Apr. 2012, To Mar. 2013

  Special study course II (Chemistry) 17

  Year-long, 理学部
• From Apr. 2012, To Mar. 2013

  Perspectives on Life Science A

  Spring, 全学共通科目
• From Apr. 2012, To Mar. 2013

  Exercises in Biochemistry

  Fall, 理学部
• From Apr. 2013, To Mar. 2014

  Exercises in Biochemistry

  Fall, 理学部
• From Apr. 2013, To Mar. 2014

  Special study course II (Chemistry) 17

  Year-long, 理学部
• From Apr. 2013, To Mar. 2014

  Biochemistry II

  Spring, 理学部
• From Apr. 2013, To Mar. 2014

  Advanced Course in Plant Biology

  Spring, 生命科学研究科
• From Apr. 2013, To Mar. 2014

  Study of Life Science I

  Spring, 全学共通科目
• From Apr. 2014, To Mar. 2015

  Exercises in Biochemistry

  Fall, 理学部
• From Apr. 2014, To Mar. 2015

  Biochemistry II

  Spring, 理学部
• From Apr. 2014, To Mar. 2015

  Advanced Course in Plant Biology

  Fall, 生命科学研究科
• From Apr. 2014, To Mar. 2015

  Study of Life Science I

  Spring, 全学共通科目
• From Apr. 2015, To Mar. 2016

  Advanced Course in Plant Biology

  Spring, 生命科学研究科
• From Apr. 2015, To Mar. 2016

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2015, To Mar. 2016

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2015, To Mar. 2016

  Study of Life Science II

  Fall, 全学共通科目
• From Apr. 2015, To Mar. 2016

  Biochemistry IV

  Spring, 理学部
• From Apr. 2015, To Mar. 2016

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2015, To Mar. 2016

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From 01 Apr. 2012, To 31 Mar. 2013

  Experimental Course of Chemistry

  Year-long, 理学部
• From 01 Apr. 2013, To 31 Mar. 2014

  Experimental Course of Chemistry

  Year-long, 理学部
• From 01 Apr. 2014, To 31 Mar. 2015

  Experimental Course of Chemistry

  Year-long, 理学部
• From 01 Apr. 2013, To 31 Mar. 2014

  Fundamental　Chemical　Experiments

  Spring, 全学共通科目
• From 01 Apr. 2011, To 31 Mar. 2015

  (統合生命科学専攻)特別実験及び演習第１

  生命科学研究科
• From 01 Apr. 2011, To 31 Mar. 2015

  (統合生命科学専攻)特別実験及び演習第２

  生命科学研究科
• From 01 Apr. 2015, To 01 Mar. 2016

  (遺伝子動態学)特別実験及び演習

  生命科学研究科
• From Apr. 2016, To Mar. 2017

  ILAS Seminar

  Spring, 全学共通科目
• From Apr. 2016, To Mar. 2017

  Advanced Course in Plant Biology

  Spring, 生命科学研究科
• From Apr. 2016, To Mar. 2017

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2016, To Mar. 2017

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2016, To Mar. 2017

  Biochemistry IV

  Spring, 理学部
• From Apr. 2016, To Mar. 2017

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2016, To Mar. 2017

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  ILAS Seminar

  Spring, 全学共通科目
• From Apr. 2017, To Mar. 2018

  Advanced Course in Plant Biology

  Spring, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  Biochemistry IV

  Spring, 理学部
• From Apr. 2017, To Mar. 2018

  Introduction to Biology and Life Science

  Spring, 全学共通科目
• From Apr. 2017, To Mar. 2018

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  ILAS Seminar

  Spring, 全学共通科目
• From Apr. 2018, To Mar. 2019

  Advanced Course in Plant Biology

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar A

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar A

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar B

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar B

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar C

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar C

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar D

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar D

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Biochemistry IV

  Spring, 理学部
• From Apr. 2018, To Mar. 2019

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  ILAS Seminar

  Spring, 全学共通科目
• From Apr. 2019, To Mar. 2020

  Advanced Course in Plant Biology

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar A

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar A

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar B

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar B

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar C

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar C

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar D

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar D

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Biochemistry IV

  Spring, 理学部
• From Apr. 2019, To Mar. 2020

  Introduction to Biology and Life Science

  Spring, 全学共通科目
• From Apr. 2019, To Mar. 2020

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Interdisciplinary Sciences

  Fall, 全学共通科目
• From Apr. 2020, To Mar. 2021

  ILAS Seminar :Scientific Literacy in Biology

  Spring, 全学共通科目
• From Apr. 2020, To Mar. 2021

  Advanced Course in Plant Biology

  Fall, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Biochemistry IV

  Spring, 理学部
• From Apr. 2020, To Mar. 2021

  Interdisciplinary Sciences :Life and society (implications of the progress in life science on human life)

  Fall, 全学共通科目
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  ILAS Seminar : Introduction to experimental molecular biology

  Spring, 全学共通科目
• From Apr. 2021, To Mar. 2022

  Advanced Course in Plant Biology

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Biochemistry IV

  Spring, 理学部
• From Apr. 2021, To Mar. 2022

  Introduction to Biology and Life Science

  Spring, 全学共通科目
• From Apr. 2021, To Mar. 2022

  Interdisciplinary Sciences :Life and society (implications of the progress in life science on human life)

  Fall, 全学共通科目
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Spring, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Experimental Course and Seminar

  Fall, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Advanced Experiments in Integrated Life Sciences

  Spring, 生命科学研究科
• From Apr. 2021, To Mar. 2022

  Advanced Experiments in Integrated Life Sciences

  Fall, 生命科学研究科

Administration

School management (title, position)

• From 01 Apr. 2008, To 19 Sep. 2017

  京都大学国際交流センター外国人留学生日本語・日本文化研修委員会 委員
• From 01 Apr. 2008, To 31 Mar. 2015

  放射線障害予防小委員会 委員
• From 01 Apr. 2013, To 31 Mar. 2015

  京都大学組換えＤＮＡ実験安全委員会 委員
• From 01 Apr. 2017, To 31 Mar. 2023

  放射線予防小委員会　委員
• From 01 Apr. 2021, To 31 Mar. 2023

  組換えＤＮＡ実験安全委員会 委員

Faculty management (title, position)

• From 01 Apr. 2006, To 31 Jul. 2019

  ＲＩ委員会委員
• From 01 Apr. 2012, To 31 Mar. 2017

  中期目標・中期計画検討委員会
• From 01 Oct. 2014, To 31 Jul. 2019

  生命科学研究科RI統括主任者
• From 01 Oct. 2015

  データ保全委員会委員
• From 01 Apr. 2017

  安全・環境保全委員会委員
• From 01 Apr. 2019, To 31 Jul. 2019

  附属放射線生物研究センター放射線障害防止委員会 委員
• From 01 Aug. 2019

  放射線障害防止委員会２号（農生棟） 委員（主任者）