Basic Information

Faculty

• Faculty of Engineering

Email Address

• Email Address

  inoue.yasuhiro.4nkyoto-u.ac.jp

Professional Memberships

• The Society of Rheology, Japan
• Biophysical Society
• Japan Society of Developmental Biologist
• The Biophysical Society of Japan
• The Japan Society of Mechanical Engineers

Academic Degree

• Master of Engineering(The University of Tokyo)
• Ph. D.(The University of Tokyo)

Academic Resume (Graduate Schools)

• The University of Tokyo, Engineering, Quantum Engineering and Systems Science, 修了
• The University of Tokyo, Engineering, Quantum Engineering and Systems Science, 修了

Academic Resume (Undergraduate School/Majors)

• Hokkaido University, Science, Physics, 卒業

High School

• High School

  東海大学付属第三高等学校

Research History

• From 01 Apr. 2019

  Department of Micro Engineering, Kyoto University, Professor
• From 01 Oct. 2016

  Institute for Frontier Medical and Life Sciences, Kyoto University, Associate Professor
• From 01 Apr. 2011

  Institute for Frontier Medical Sciences, Kyoto University, Associate Professor
• From 01 May 2007

  Department of Mechanical Engineering and Science, Kyoto University, Assistant Professor
• From 01 Apr. 2006

  RIKEN, Research Scientist
• From 01 Apr. 2003

  The Japan Society for the Promotion of Science, Research Fellow PD

ID,URL

• J-Global ID

  201401048153036048

• External link

  https://www.inoue-lab.info/

researchmap URL

• https://researchmap.jp/yasuhiroinoue

Research

Research Topics, Overview of the research

• Research Topics

  Life Mathematical Science, Biophysics, Computational synthetic biology, Meta-model on dynamics with hyper degrees of freedom

Research Interests

• Evolution and Development of Complex Adaptive System
• Mathematics and Physics for Living Matters
• Biophysics
• Life Mathematical Science

Research Areas

• Life sciences, Biophysics
• Life sciences, Biomedical engineering

Papers

• Planar polarized force propagation integrates cell behavior with tissue shaping during convergent extension.

  Shinuo Weng; Masaya Hayashi; Yasuhiro Inoue; John B Wallingford

  Current biology : CB, 25 Nov. 2024, Peer-reviewed

  
• One-degree-of-freedom planar link leg mechanisms design without predetermined trajectory using a genetic algorithm

  Yoshihiko MATSUMOTO; Shintaro YAMASAKI; Yasuhiro INOUE

  Journal of Advanced Mechanical Design, Systems, and Manufacturing, 09 Oct. 2024, Peer-reviewed, Last author

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• Mathematical Model on Multicellular Dynamics for Simulating Tissue Morphogenesis

  井上康博

  応用数理, 2023, Peer-reviewed, Invited, Lead author, Corresponding author

  
• Computational mechanics simulations on epithelial folding (Strengths, insights, and future challenges)

  Kentaro MORIKAWA; Yasuhiro INOUE

  Journal of Biomechanical Science and Engineering, 31 Mar. 2024, Peer-reviewed, Last author

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• Adhesion and shrinkage transform the rounded pupal horn into an angular adult horn in Japanese rhinoceros beetle

  Keisuke Matsuda; Haruhiko Adachi; Hiroki Gotoh; Yasuhiro Inoue; Shigeru Kondo

  Development, 13 Mar. 2024

  
• Unveiling the role of differential growth in 3D morphogenesis: An inference method to analyze area expansion rate distribution in biological systems.

  Kentaro Morikawa; Shinichi Morita; Kazuki Sakura; Akiteru Maeno; Hiroki Gotoh; Teruyuki Niimi; Yasuhiro Inoue

  Journal of theoretical biology, 24 Oct. 2023, Peer-reviewed, Corresponding author

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• Cell-center-based model for simulating three-dimensional monolayer tissue deformation.

  Tomohiro Mimura; Yasuhiro Inoue

  Journal of theoretical biology, 12 Jun. 2023, Peer-reviewed, Corresponding author

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• Mechanical models affecting beetle horn remodeling

  Keisuke Matsuda; Haruhiko Adachi; Hiroki Gotoh; Yasuhiro Inoue; Shigeru Kondo

  18 Jan. 2023

  
• Method for estimating the area expansion rate distribution of epithelial cell sheets in three-dimensional morphogenesis

  MORIKAWA Kentaro; MORITA Shinichi; SAKURA Kazuki; GOTOH Hiroki; NIIMI Teruyuki; INOUE Yasuhiro

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2022

  
• Position of meristems and the angles of the cell division plane regulate the uniqueness of lateral organ shape.

  Ayaka Kinoshita; Makiko Naito; Zining Wang; Yasuhiro Inoue; Atsushi Mochizuki; Hirokazu Tsukaya

  Development (Cambridge, England), 14 Nov. 2022, Peer-reviewed

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• Impact of environmental asymmetry on epithelial morphogenesis.

  Kentaro Morikawa; Daichi Kuroda; Yasuhiro Inoue

  Scientific reports, 05 Jul. 2022, Peer-reviewed, Corresponding author

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• Computational analyses decipher the primordial folding coding the 3D structure of the beetle horn

  Keisuke Matsuda; Hiroki Gotoh; Haruhiko Adachi; Yasuhiro Inoue; Shigeru Kondo

  Scientific Reports, Dec. 2021, Peer-reviewed

  
• Epithelial tissue folding pattern in confined geometry

  Yasuhiro Inoue; Itsuki Tateo; Taiji Adachi

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Jun. 2020, Peer-reviewed, Lead author, Corresponding author

  
• An energy landscape approach to understanding variety and robustness in tissue morphogenesis

  Hironori Takeda; Yoshitaka Kameo; Yasuhiro Inoue; Taiji Adachi

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Apr. 2020, Peer-reviewed

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• Collective and contractile filament motions in the myosin motility assay.

  Wonyeong Jung; Luke A Fillenwarth; Atsushi Matsuda; Jing Li; Yasuhiro Inoue; Taeyoon Kim

  Soft matter, 16 Jan. 2020, Peer-reviewed, Corresponding author

  
• Mobility of Molecular Motors Regulates Contractile Behaviors of Actin Networks

  Atsushi Matsuda; Jing Li; Peter Brumm; Taiji Adachi; Yasuhiro Inoue; Taeyoon Kim

  BIOPHYSICAL JOURNAL, Jun. 2019, Peer-reviewed, Corresponding author

  
• Precise Temporal Regulation of Molecular Diffusion within Dendritic Spines by Actin Polymers during Structural Plasticity.

  Kazuki Obashi; Atsushi Matsuda; Yasuhiro Inoue; Shigeo Okabe

  Cell reports, 30 Apr. 2019, Peer-reviewed

  
• PCP-dependent transcellular regulation of actomyosin oscillation facilitates convergent extension of vertebrate tissue

  Asako Shindo; Yasuhiro Inoue; Makoto Kinoshita; John B. Wallingford

  Developmental Biology, Feb. 2019, Peer-reviewed

  
• 発生過程の組織変形における細胞集団運動の数理モデル

  齋梧 等; 井上 康博; 安達 泰治

  バイオエンジニアリング講演会講演論文集, Jan. 2019

  
• Strain-triggered mechanical feedback in self-organizing optic-cup morphogenesis.

  S Okuda; N Takata; Y Hasegawa; M Kawada; Y Inoue; T Adachi; Y Sasai; M Eiraku

  Science advances, Nov. 2018, Peer-reviewed

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• Anisotropy of cell division and epithelial sheet bending via apical constriction shape the complex folding pattern of beetle horn primordia

  Haruhiko Adachi; Keisuke Matsuda; Teruyuki Niimi; Yasuhiro Inoue; Shigeru Kondo; Hiroki Gotoh

  Mechanisms of Development, 01 Aug. 2018, Peer-reviewed

  
• Combining Turing and 3D vertex models reproduces autonomous multicellular morphogenesis with undulation, tubulation, and branching (vol 8, 2386, 2018)

  Satoru Okuda; Takashi Miura; Yasuhiro Inoue; Taiji Adachi; Mototsugu Eiraku

  SCIENTIFIC REPORTS, Jun. 2018, Peer-reviewed

  
• Elasticity-based boosting of neuroepithelial nucleokinesis via indirect energy transfer from mother to daughter

  Shinoda, T.; Nagasaka, A.; Inoue, Y.; Higuchi, R.; Minami, Y.; Kato, K.; Suzuki, M.; Kondo, T.; Kawaue, T.; Saito, K.; Ueno, N.; Fukazawa, Y.; Nagayama, M.; Miura, T.; Adachi, T.; Miyata, T.

  PLoS Biology, Apr. 2018, Peer-reviewed

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• Elasticity-based boosting of neuroepithelial nucleokinesis via indirect energy transfer from mother to daughter

  Tomoyasu Shinoda; Arata Nagasaka; Yasuhiro Inoue; Ryo Higuchi; Yoshiaki Minami; Kagayaki Kato; Makoto Suzuki; Takefumi Kondo; Takumi Kawaue; Kanako Saito; Naoto Ueno; Yugo Fukazawa; Masaharu Nagayama; Takashi Miura; Taiji Adachi; Takaki Miyata

  PLOS BIOLOGY, Apr. 2018, Peer-reviewed

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• Combining Turing and 3D vertex models reproduces autonomous multicellular morphogenesis with undulation, tubulation, and branching

  Satoru Okuda; Takashi Miura; Yasuhiro Inoue; Taiji Adachi; Mototsugu Eiraku

  SCIENTIFIC REPORTS, Feb. 2018, Peer-reviewed

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• 細胞変形を考慮した細胞集団運動の数理モデル化

  齋梧 等; 井上 康博; 安達 泰治

  年次大会, Jan. 2018

  
• Complex furrows in a 2D epithelial sheet code the 3D structure of a beetle horn

  Keisuke Matsuda; Hiroki Gotoh; Yuki Tajika; Takamichi Sushida; Hitoshi Aonuma; Teruyuki Niimi; Masakazu Akiyama; Yasuhiro Inoue; Shigeru Kondo

  SCIENTIFIC REPORTS, Oct. 2017, Peer-reviewed

  
• Preface: mathematics, physics, and engineering in biology

  Yasuhiro Inoue; Masakazu Akiyama

  DEVELOPMENT GROWTH & DIFFERENTIATION, Jun. 2017, Peer-reviewed

  
• Mechanical role of the spatial patterns of contractile cells in invagination of growing epithelial tissue

  Yasuhiro Inoue; Tadashi Watanabe; Satoru Okuda; Taiji Adachi

  DEVELOPMENT GROWTH & DIFFERENTIATION, Jun. 2017, Peer-reviewed, Lead author, Corresponding author

  
• Mathematical model of mechano-chemical coupling in tissue morphogenesis

  井上康博; 安達泰治

  理論応用力学講演会講演論文集(Web), Jan. 2017

  
• Mechanical roles of apical constriction, cell elongation, and cell migration during neural tube formation in Xenopus

  Yasuhiro Inoue; Makoto Suzuki; Tadashi Watanabe; Naoko Yasue; Itsuki Tateo; Taiji Adachi; Naoto Ueno

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Dec. 2016, Peer-reviewed, Lead author, Corresponding author

  
• Modeling cell apoptosis for simulating three-dimensional multicellular morphogenesis based on a reversible network reconnection framework

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Taiji Adachi; Yoshiki Sasai

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Aug. 2016, Peer-reviewed

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• Mechanosensitive kinetic preference of actin-binding protein to actin filament

  Yasuhiro Inoue; Taiji Adachi

  PHYSICAL REVIEW E, Apr. 2016, Peer-reviewed

  
• Mechanosensitive kinetic preference of actin-binding protein to actin filament

  Yasuhiro Inoue; Taiji Adachi

  PHYSICAL REVIEW E, Apr. 2016, Peer-reviewed

  
• Three-Dimensional Vertex Simulation on Smooth Surface Maintenance of Growing Epithelial Tissue Based on Intercellular Mechano-Feedback

  Yoshihide Enomoto; Yasuhiro Inoue; Shigenobu Yonemura; Taiji Adachi

  BIOPHYSICAL JOURNAL, Feb. 2016, Peer-reviewed

  
• Reductions in Anisotropic Errors from Implementation of Phase-Field Wetting Boundary Condition for Off-Grid Objects

  Yasuhiro Inoue; Kazuki Ishida; Naoki Takada; Masaki Hojo

  INTERNATIONAL JOURNAL OF COMPUTATIONAL METHODS, Dec. 2015, Peer-reviewed

  
• Brownian dynamics simulation study on force-velocity relation in actin-based membrane protrusion

  Yasuhiro Inoue; Takeji Deji; Taiji Adachi

  COMPUTATIONAL PARTICLE MECHANICS, Dec. 2015, Peer-reviewed

  
• Reductions in Anisotropic Errors from Implementation of Phase-Field Wetting Boundary Condition for Off-Grid Objects

  Yasuhiro Inoue; Kazuki Ishida; Naoki Takada; Masaki Hojo

  INTERNATIONAL JOURNAL OF COMPUTATIONAL METHODS, Dec. 2015, Peer-reviewed

  
• Brownian dynamics simulation study on force-velocity relation in actin-based membrane protrusion

  Yasuhiro Inoue; Takeji Deji; Taiji Adachi

  COMPUTATIONAL PARTICLE MECHANICS, Dec. 2015, Peer-reviewed

  
• Vertex dynamics simulations of viscosity-dependent deformation during tissue morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Taiji Adachi; Yoshiki Sasai

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Apr. 2015, Peer-reviewed

  
• Coupling intercellular molecular signalling with multicellular deformation for simulating three-dimensional tissue morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Tadashi Watanabe; Taiji Adachi

  INTERFACE FOCUS, Apr. 2015, Peer-reviewed

  
• Three-dimensional vertex model for simulating multicellular morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Taiji Adachi

  BIOPHYSICS AND PHYSICOBIOLOGY, 2015, Peer-reviewed

  
• 生命動態システム科学 II.数理生物学 5.細胞(2)多細胞システムのダイナミクス

  INOUE YASUHIRO; ADACHI TAIJI

  生体の科学, 15 Oct. 2014

  
• Mechanics-based Simulations for Understanding Multicellular Tissue Morphogenesis

  OKUDA Satoru; INOUE Yasuhiro; ADACHI Taiji

  Seibutsu Butsuri, 2014

  
• TAG-1-assisted progenitor elongation streamlines nuclear migration to optimize subapical crowding

  Mayumi Okamoto; Takashi Namba; Tomoyasu Shinoda; Takefumi Kondo; Tadashi Watanabe; Yasuhiro Inoue; Kosei Takeuchi; Yukiko Enomoto; Kumiko Ota; Kanako Oda; Yoshino Wada; Ken Sagou; Kanako Saito; Akira Sakakibara; Ayano Kawaguchi; Kazunori Nakajima; Taiji Adachi; Toshihiko Fujimori; Masahiro Ueda; Shigeo Hayashi; Kozo Kaibuchi; Takaki Miyata

  NATURE NEUROSCIENCE, Nov. 2013, Peer-reviewed

  
• Modeling cell proliferation for simulating three-dimensional tissue morphogenesis based on a reversible network reconnection framework

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Oct. 2013, Peer-reviewed

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• Reversible network reconnection model for simulating large deformation in dynamic tissue morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Aug. 2013, Peer-reviewed

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• Apical contractility in growing epithelium supports robust maintenance of smooth curvatures against cell-division-induced mechanical disturbance

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  JOURNAL OF BIOMECHANICS, Jun. 2013, Peer-reviewed

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• Role of the Actin-Myosin Catch Bond on Actomyosin Aggregate Formation

  Yasuhiro Inoue; Taiji Adachi

  CELLULAR AND MOLECULAR BIOENGINEERING, Mar. 2013, Peer-reviewed

  
• 2SEA-04 Computational biophysics on epithelial tissue deformation : from molecular to tissue scale(2SEA Biophysical views in structural cell biology,Symposium,The 51th Annual Meeting of the Biophysical Society of Japan)

  Inoue Yasuhiro; Okuda Satoru; Fujii Tetsuya; Ohto Kohei; Adachi Taiji

  Seibutsu Butsuri, 2013

  
• Quantitative analysis of extension-torsion coupling of actin filaments

  Shinji Matsushita; Yasuhiro Inoue; Taiji Adachi

  BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Apr. 2012, Peer-reviewed

  
• Soft-core Interaction Between Entanglement Segments for Primitive Chain Network Simulations

  Satoru Okuda; Takashi Uneyama; Yasuhiro Inoue; Yuichi Masubuchi; Masaki Hojo

  NIHON REOROJI GAKKAISHI, 2012, Peer-reviewed

  
• 1PT219 Simulations of large deformation during tissue morphogenesis using reversible network reconnection model(The 50th Annual Meeting of the Biophysical Society of Japan)

  Okuda Satoru; Inoue Yasuhiro; Eiraku Mototsugu; Sasai Yoshiki; Adachi Taiji

  Seibutsu Butsuri, 2012

  
• 1PT133 Molecular dynamics model of cofilactin filament(The 50th Annual Meeting of the Biophysical Society of Japan)

  Fujii Tetsuya; Inoue Yasuhiro; Adachi Taiji

  Seibutsu Butsuri, 2012

  
• Mechanism of micro-void formation inside fiber tow in model composite using microfluidic device

  M. Hoio; Y. Mitsuyama; Y. Inoue; M. Nishikawa

  8th Asian-Australasian Conference on Composite Materials 2012, ACCM 2012 - Composites: Enabling Tomorrow's Industry Today, 2012, Peer-reviewed

  
• Mode I type interlaminar fracture toughness of Cu plated Gd-YBCO coated conductor

  M. Hojo; Y. Tanie; M. Sugano; Y. Inoue; M. Nishikawa; K. Shikimachi; T. Watanabe; N. Hirano; S. Nagaya

  ADVANCES IN SUPERCONDUCTIVITY XXIV, 2012, Peer-reviewed

  
• Mode I type delamination fracture toughness of YBCO coated conductor with additional Cu layer

  T. Miyazato; M. Hojo; M. Sugano; T. Adachi; Y. Inoue; K. Shikimachi; N. Hirano; S. Nagaya

  PHYSICA C-SUPERCONDUCTIVITY AND ITS APPLICATIONS, Nov. 2011, Peer-reviewed

  
• Advances in Experiments and Modeling in Micro- and Nano-Biomechanics: A Mini Review

  Mian Long; Masaaki Sato; Chwee Teck Lim; Jianhua Wu; Taiji Adachi; Yasuhiro Inoue

  CELLULAR AND MOLECULAR BIOENGINEERING, Sep. 2011, Peer-reviewed

  
• Modeling myosin-dependent rearrangement and force generation in an actomyosin network

  Yasuhiro Inoue; Shunsuke Tsuda; Koji Nakagawa; Masaki Hojo; Taiji Adachi

  JOURNAL OF THEORETICAL BIOLOGY, Jul. 2011, Peer-reviewed

  
• Coarse-grained Brownian ratchet model of membrane protrusion on cellular scale

  Yasuhiro Inoue; Taiji Adachi

  BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, Jul. 2011, Peer-reviewed

  
• Effect of tensile force on the mechanical behavior of actin filaments

  Shinji Matsushita; Yasuhiro Inoue; Masaki Hojo; Masahiro Sokabe; Taiji Adachi

  JOURNAL OF BIOMECHANICS, Jun. 2011, Peer-reviewed

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• 3D1558 Extension-torsion coupling behavior of single actin filament(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

  Matsushita Shinji; Inoue Yasuhiro; Sokabe Masahiro; Adachi Taiji

  Seibutsu Butsuri, 2011

  
• Evaluation of extensional and torsional stiffness of single actin filaments by molecular dynamics analysis

  Shinji Matsushita; Taiji Adachi; Yasuhiro Inoue; Masaki Hojo; Masahiro Sokabe

  JOURNAL OF BIOMECHANICS, Dec. 2010, Peer-reviewed

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• Effect of fatigue loading on critical current in stainless steel-laminated DI-BSCCO superconducting composite tape

  M. Hojo; K. Osawa; T. Adachi; Y. Inoue; K. Osamura; S. Ochiai; N. Ayai; K. Hayashi

  PHYSICA C-SUPERCONDUCTIVITY AND ITS APPLICATIONS, Nov. 2010, Peer-reviewed

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• Simulations of dynamics of actin filaments by remodeling them in shear flows

  Yasuhiro Inoue; Takeji Deji; Yoshitaka Shimada; Masaki Hojo; Taiji Adachi

  COMPUTERS IN BIOLOGY AND MEDICINE, Nov. 2010, Peer-reviewed

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• Approach Behavior of Binding Proteins Toward Actin Filament (Brownian Dynamics Simulation)

  安達泰治; 島田義孝; 井上康博; 北條正樹

  日本機械学会論文集 A編, 25 Aug. 2010, Peer-reviewed

  
• Phase-Field Navier-Stokes モデルによる繊維間隙スケール樹脂流れにおける気液界面ダイナミクスの検討

  井上 康博; 松本 迪斉; 北條 正樹; 高田 尚樹; 安達 泰治; 石田 和希

  日本複合材料学会誌 = Journal of the Japan Society for Composite Materials, 15 May 2010, Peer-reviewed

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• Immersed Boundary - Phase Field法による単繊維周りの微視的樹脂流れ解析

  石田 和希; 井上 康博; 安達 泰治; 北條 正樹; 高田 尚樹

  第1回日本複合材料合同会議講演論文集, Mar. 2010, Peer-reviewed

  
• アクチン細胞骨格構造ダイナミクスのシミュレーション

  津田 峻佑; 井上 康博; 安達 泰治; 北條 正樹

  理研シンポジウムVCADシステム研究2009講演論文集, Mar. 2010, Peer-reviewed

  
• アクチンフィラメント分岐の粗視化モデルリング

  出路 丈時; 井上 康博; 安達 泰治; 北條 正樹

  理研シンポジウムVCADシステム研究2009講演論文集, Mar. 2010, Peer-reviewed

  
• 1P221 Modeling and simulation of dynamic reconstructing network of stress fibers with mechanical sensing through focal adhesions(Cell biology,The 48th Annual Meeting of the Biophysical Society of Japan)

  Inoue Yasuhiro; Adachi Taiji

  Seibutsu Butsuri, 2010

  
• 3P035 Tensile Force Suppresses Torsional Motions of Individual Actin Subunits(Protein: Structure & Function,The 48th Annual Meeting of the Biophysical Society of Japan)

  Matsushita Shinji; Inoue Yasuhiro; Hojo Masaki; Sokabe Masahiro; Adachi Taiji

  Seibutsu Butsuri, 2010

  
• Approach behavior of binding proteins toward actin filament (brownian dynamics simulation)

  Adachi, T.; Shimada, Y.; Inoue, Y.; Hojo, M.

  Nihon Kikai Gakkai Ronbunshu, A Hen/Transactions of the Japan Society of Mechanical Engineers, Part A, 2010, Peer-reviewed

  
• 固体壁間の高分子溶融体における分子鎖の拡散運動：プリミティブチェーンネットワークシミュレーションによる検討

  奥田 覚; 井上 康博; 北條 正樹; 増渕 雄一; 畝山 多加志

  第57回レオロジー討論会講演要旨集, Oct. 2009, Peer-reviewed

  
• 単繊維周りの微視的樹脂流れ解析に向けた固気液境界モデル

  石田 和希; 井上 康博; 北條 正樹; 安達 泰治; 高田 尚樹

  第34回複合材料シンポジウム講演要旨集, Sep. 2009, Peer-reviewed

  
• Change in fatigue property and its relation to critical current for YBCO coated conductor with additional Cu layer

  Y. Yoshida; M. Hojo; M. Sugano; T. Adachi; Y. Inoue; K. Shikimachi; N. Hirano; S. Nagaya

  PHYSICA C-SUPERCONDUCTIVITY AND ITS APPLICATIONS, Aug. 2009, Peer-reviewed

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• Wall boundary model for primitive chain network simulations

  Satoru Okuda; Yasuhiro Inoue; Yuichi Masubuchi; Takasi Uneyama; Masaki Hojo

  JOURNAL OF CHEMICAL PHYSICS, Jun. 2009, Peer-reviewed

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• プリミティブチェーンネットワークシミュレーションによる微小壁面間隔が高分子溶融体に与える束縛効果の検討

  奥田 覚; 井上 康博; 北條 正樹; 増渕 雄一; 畝山 多加志

  第14回分子動力学シンポジウム講演論文集, May 2009, Peer-reviewed

  
• 多相流体モデルによるフィラメント間隙における樹脂−空気界面ダイナミクスの検討

  井上 康博; 松本 迪斉; 北條 正樹; 高田 尚樹; 安達 泰治

  日本複合材料学会2009年度研究発表講演会予稿集, May 2009, Peer-reviewed

  
• プリミティブチェーンネットワークモデルによる壁面間の高分子溶融体ダイナミクスシミュレーションの検討

  奥田 覚; 井上 康博; 北條 正樹; 増渕 雄一; 畝山 多加志

  日本レオロジー学会第36回年会講演予稿集, May 2009, Peer-reviewed

  
• 1P-155 Thermodynamic investigation of modulation of binding affinity between cytoskeleton and its regulatory proteins in response to mechanical stresses(Cell biology, The 47th Annual Meeting of the Biophysical Society of Japan)

  Inoue Yasuhiro; Adachi Taiji; Hojo Masaki

  Seibutsu Butsuri, 2009

  
• 2P-009 Effects of tensile force on mechanical properties of actin filament(Protein:Structure,The 47th Annual Meeting of the Biophysical Society of Japan)

  Matsushita Shinji; Adachi Taiji; Inoue Yasuhiro; Hojo Masaki; Sokabe Masahiro

  Seibutsu Butsuri, 2009

  
• Coarse-grained modeling and simulation of actin filament behavior based on Brownian dynamics method

  Yoshitaka Shimada; Taiji Adachi; Yasuhiro Inoue; Masaki Hojo

  MCB Molecular and Cellular Biomechanics, 2009, Peer-reviewed

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• A simulation model for amphiphilic molecules in a mesoscale solvent

  Yasuhiro Inoue; Shu Takagi; Yoichiro Matsumoto

  COMPUTERS & MATHEMATICS WITH APPLICATIONS, Apr. 2008, Peer-reviewed

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• 1P-177 Thermodynamics study on torsion induced inhibition of cofilin binding to actin filament(The 46th Annual Meeting of the Biophysical Society of Japan)

  Inoue Yasuhiro; Adachi Taiji; Hojo Masaki

  Seibutsu Butsuri, 2008

  
• 2P-045 Stiffness Evaluation of Actin Filament by Molecular Dynamics Analysis(The 46th Annual Meeting of the Biophysical Society of Japan)

  Matsushita Shinji; Adachi Taiji; Inoue Yasuhiro; Hojo Masaki; Sokabe Masahiro

  Seibutsu Butsuri, 2008

  
• Statistical analysis on Amida-kuji

  Yasuhiro Inoue

  PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, Sep. 2006, Peer-reviewed

  
• A mesoscopic simulation study of distributions of droplets in a bifurcating channel

  Yasuhiro Inoue; Shu Takagi; Yoichiro Matsumoto

  COMPUTERS & FLUIDS, Sep. 2006, Peer-reviewed

  
• A mesoscopic simulation model for immiscible multiphase fluids

  Y Inoue; Y Chen; H Ohashi

  JOURNAL OF COMPUTATIONAL PHYSICS, Nov. 2004, Peer-reviewed

  
• On the density correlation of the spontaneous fluctuation in a real-coded lattice gas

  Y Inoue; Y Chen; H Ohashi

  COMPUTER PHYSICS COMMUNICATIONS, Jun. 2003, Peer-reviewed

  
• Development of a simulation model for solid objects suspended in a fluctuating fluid

  Y Inoue; Y Chen; H Ohashi

  JOURNAL OF STATISTICAL PHYSICS, Apr. 2002, Peer-reviewed

  
• Development of a simulation model for solid objects suspended in a fluctuating fluid

  Y Inoue; Y Chen; H Ohashi

  COMPUTER PHYSICS COMMUNICATIONS, Dec. 2001, Peer-reviewed

  

Misc.

• Mathematical Definition and Systematization of Puzzle Rules

  Itsuki Maeda; Yasuhiro Inoue

  06 Jan. 2025

  
• Someone to meet you: Introspective Encounter with the Presence of Someone from Uncertain Spatial Void

  Yuki Nemoto; Yasuhiro Inoue

  2022 Nicograph International (NicoInt), 01 Jun. 2022

  
• Development of Design Method for Two-Dimensional Shield as an Information Medium to Induce Diverse Interpretations

  根本悠樹; 森川健太郎; 井上康博

  日本バーチャルリアリティ学会大会論文集(CD-ROM), 2023

  
• Design of Walking Mechanisms using a Genetic Algorithm

  松本嘉彦; 井上康博

  日本機械学会年次大会講演論文集(CD-ROM), 2023

  
• Adult beetle horn formation by ”adhesion and shrinkage”

  松田佳祐; 足立晴彦; 後藤寛貴; 井上康博; 近藤滋

  日本分子生物学会年会プログラム・要旨集(Web), 2022

  
• Development of Genetic Algorithm for Designing Planar Link Mechanisms

  松本嘉彦; 井上康博

  日本機械学会年次大会講演論文集(CD-ROM), 2022

  
• Folding structure making the 3D morphology of a beetle horn

  松田佳祐; 足立晴彦; 後藤寛貴; 井上康博; 近藤滋

  日本数理生物学会年会(Web), 2021

  
• 消化管の左右非対称な捻転は上皮細胞の3次元的ねじれによって誘発される

  稲木美紀子; 行松美樹; 瀧川大志; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本分子生物学会年会プログラム・要旨集(Web), 2020

  
• 上皮組織の三次元シミュレーションを用いた消化管の左右非対称な捻転を引き起こす細胞変形の素過程の同定

  稲木美紀子; 瀧川大志; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本分子生物学会年会プログラム・要旨集(Web), 2019

  
• Simulations of epithelial invagination by tissue-level contractile myosin cable

  渡辺章太郎; 井上康博

  バイオエンジニアリング講演会講演論文集(CD-ROM), 2019

  
• 脳の発生からみる上皮組織の折りたたみと管形成の力学制御

  鈴木誠; 井上康博; 上野直人

  日本バイオレオロジー学会誌(Web), 2018

  
• カブトムシの収納術

  松田佳祐; 井上康博; 後藤寛貴; 足立晴彦; 近藤滋

  日本分子生物学会年会プログラム・要旨集(Web), 2018

  
• 曲面上の分子拡散動態シミュレーションから予想される細胞形状の役割

  井上康博; 木村健治

  日本分子生物学会年会プログラム・要旨集(Web), 2018

  
• 上皮形態形成を捉える多細胞力学シミュレーション

  井上康博

  計算で物事を理解する予測する-産業界の難課題が求めている解決パラダイムの提案、三つの計算科学、連続体、分子、そして統計 平成30年度 理研シンポジウム, 2018

  
• 組織形態制御の基盤となる細胞骨格ダイナミクス

  進藤麻子; 井上康博; ANASTASIA Audrey; WALLINGFORD John; 木下専

  日本生化学会大会(Web), 2018

  
• 骨の形態リモデリングと代謝のin silico実験

  安達泰治; 宮雄貴; 亀尾佳貴; 井上康博; 中島友紀

  日本骨形態計測学会雑誌, 2017

  
• 曲面上のブラウン運動シミュレーション手法の検討

  木村健治; 井上康博

  日本物理学会講演概要集(CD-ROM), 2017

  
• ブラウン動力学シミュレーションによる生体膜上の分子拡散動態の検討

  木村健治; 井上康博

  日本生化学会大会(Web), 2017

  
• 上皮組織に折り畳み構造が形成されるメカニズムの数値的検討

  立尾樹; 井上康博; 安達泰治

  日本数理生物学会年会(Web), 2017

  
• 曲率依存性を再現する曲面上のブラウン運動シミュレーション法の検討

  木村健治; 井上康博

  日本数理生物学会年会(Web), 2017

  
• アクチンフィラメントによる分子混み合い環境下における分子の異常拡散の解析

  松田惇志; 井上康博; 安達泰治

  バイオエンジニアリング講演会講演論文集(CD-ROM), 2017

  
• 成虫原基における成長する上皮組織の折り畳み形成シミュレーション

  立尾樹; 井上康博; 安達泰治

  バイオエンジニアリング講演会講演論文集(CD-ROM), 2017

  
• 上皮折りたたみの多細胞力学シミュレーション

  井上康博; 立尾樹; 安達泰治

  バイオエンジニアリング講演会講演論文集(CD-ROM), 2017

  
• 生命科学・医学研究における事例に学ぶ III.細胞動態 11.上皮形態形成のメカニズム解明に向けた数理モデル

  井上康博

  実験医学, 2017

  
• 樹状突起スパイン内アクチン混み合い環境下における分子の拡散シミュレーション

  松田惇志; 井上康博; 安達泰治

  日本機械学会バイオフロンティア講演会講演論文集(CD-ROM), 2017

  
• ショウジョウバエの円筒細胞組織の捻転現象を理解するための三次元バーテックスダイナミクスモデル

  須志田隆道; 大久保明野; 稲木美紀子; 井上康博; 松野健治; 秋山正和

  日本数理生物学会年会(Web), 2017

  
• ショウジョウバエ胚上皮細胞のキラルなねじれによる管状上皮組織の捻転機構

  大久保明野; 稲木美紀子; 秋山正和; 井上康博; 松野健治

  日本分子生物学会年会プログラム・要旨集(Web), 2016

  
• 多細胞組織の形態形成シミュレーション

  安達泰治; 奥田覚; 井上康博

  再生医療, 2014

  
• 形態形成における力学-生化学連成を考慮した3次元組織変形の数理モデリング・シミュレーション

  井上康博; 奥田覚; 渡辺惟史; 安達泰治

  日本分子生物学会年会プログラム・要旨集(Web), 2013

  
• 張力作用下におけるアクチンフィラメントの分子間相互作用解析

  松下慎二; 松下慎二; 安達泰治; 安達泰治; 井上康博; 井上康博; 北條正樹; 曽我部正博; 曽我部正博

  日本機械学会計算力学講演会論文集(CD-ROM), 2010

  
• Immersed Boundary法と拡散界面法との連成による単繊維周りの樹脂流れ解析

  石田和希; 井上康博; 北條正樹; 安達泰治; 高田尚樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2010

  
• アクチン重合による細胞膜突出のブラウン動力学シミュレーション

  出路丈時; 出路丈時; 井上康博; 井上康博; 安達泰治; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2010

  
• VCADシステム研究2009-ものつくりとバイオ研究分野における計測・モデリング・シミュレーション-アクチン細胞骨格ダイナミクスのマルチスケールシミュレーション

  井上康博; 井上康博; 津田峻佑; 津田峻佑; 出路丈時; 出路丈時; 安達泰治; 安達泰治; 北條正樹

  VCADシステム研究2009 ものつくりとバイオ研究分野における計測・モデリング・シミュレーション 理研シンポジウム 平成22年, 2010

  
• アクトミオシンネットワークの収縮力はミオシン濃度のべき乗則に従う

  井上康博; 井上康博; 安達泰治; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2010

  
• プリミティブチェーンネットワークシミュレーション:固体壁面間隔が高分子溶融体中の分子鎖からみ合いに及ぼす束縛効果

  奥田覚; 井上康博; 北條正樹; 増渕雄一; 畝山多加志

  日本機械学会計算力学講演会論文集(CD-ROM), 2009

  
• 張力がアクチンフィラメントの分子間相互作用に及ぼす影響

  松下慎二; 松下慎二; 安達泰治; 安達泰治; 井上康博; 井上康博; 北條正樹; 曽我部正博; 曽我部正博

  日本機械学会計算力学講演会論文集(CD-ROM), 2009

  
• アクチンフィラメントネットワーク構造におけるフィラメント分岐のモデル化

  出路丈時; 井上康博; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2009

  
• アクトミオシン相互作用によるアクチン細胞骨格ネットワークダイナミクスのモデル化

  津田峻佑; 津田峻佑; 井上康博; 井上康博; 安達泰治; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2009

  
• 細胞骨格調節タンパクの力学応答的結合の熱力学モデル

  井上康博; 井上康博; 安達泰治; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2009

  
• プリミティブチェーンネットワークシミュレーションのための固体壁モデルの提案

  奥田覚; 井上康博; 北條正樹; 増渕雄一

  日本機械学会計算力学講演会論文集(CD-ROM), 2008

  
• 張力作用下におけるアクチンフィラメントの分子ダイナミクス解析

  松下慎二; 松下慎二; 安達泰治; 安達泰治; 井上康博; 井上康博; 北條正樹; 曽我部正博; 曽我部正博

  日本機械学会計算力学講演会論文集(CD-ROM), 2008

  
• アクチンフィラメントのねじりによる協同的アクチン-コフィリン結合の統計力学解析

  井上康博; 井上康博; 安達泰治; 安達泰治; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2008

  
• アクチンフィラメント長さとArp2/3複合体結合部位の関係:ブラウン動力学解析

  島田義孝; 島田義孝; 安達泰治; 安達泰治; 井上康博; 井上康博; 北條正樹

  日本機械学会計算力学講演会論文集(CD-ROM), 2008

  
• ブラウン動力学法によるアクチンフィラメントのターンオーバー速度の解析

  島田義孝; 島田義孝; 安達泰治; 安達泰治; 井上康博; 井上康博; 北條正樹

  分子シミュレーション討論会講演要旨集, 2007

  
• 粗視化アクチンダイナミクスモデルを用いたフィラメント伸長速度の解析

  島田義孝; 島田義孝; 安達泰治; 安達泰治; 井上康博; 北條正樹; 堤定美

  計算工学講演会論文集, 2007

  
• 実数型格子ガス法による微小血管内のベシクル流れ解析のための基礎シミュレーション

  井上康博; 高木周; 松本洋一郎

  数値流体力学シンポジウム講演論文集(CD-ROM), 2003

  
• Analytical method for curved surface morphogenesis in organisms from a geometric perspective

  森川健太郎; 森田慎一; 森田慎一; 左倉和喜; 左倉和喜; 前野哲輝; 後藤寛貴; 新美輝幸; 新美輝幸; 井上康博

  日本数理生物学会年会(Web), 2023

  
• House constrution and mesh formation in the larvacean, Oikopleura dioica.

  小沼健; 柳田夏希; 池田真一郎; 三輪真紀子; 山崎慎太郎; 秋山正和; 井上康博; 上村了美; 駒野恭子; 船山典子; 西田宏記

  日本数理生物学会年会(Web), 2023

  
• House formation using cellulose fibers that are secreted from the epidermis of the larvacean, Oikopleura dioica.

  小沼健; 小沼健; 柳田夏希; 池田真一郎; 三輪真紀子; 三輪真紀子; 山崎慎太郎; 秋山正和; 井上康博; 上村了美; 駒野恭子; 船山典子; 西田宏記

  日本分子生物学会年会プログラム・要旨集(Web), 2023

  
• Estimation of area expansion rate distribution on epithelial morphogenesis using harmonic map

  森川健太郎; 森田慎一; 森田慎一; 左倉和喜; 後藤寛貴; 新美輝幸; 新美輝幸; 井上康博

  日本機械学会バイオフロンティア講演会講演論文集(CD-ROM), 2022

  
• 細胞内構造システムのバイオメカニクス

  安達泰治; 井上康博; 山岡英孝; 須長純子

  VCADシステム研究 ものつくりから生きた細胞まで、ものを扱う基盤技術を創る 理研シンポジウム 平成18年, 2006

  
• ショウジョウバエ消化管の捻転を誘発する上皮細胞のねじれと高さ退縮の定量的解析

  行松美樹; 瀧川大志; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 稲木美紀子; 松野健治

  日本分子生物学会年会プログラム・要旨集(Web), 2020

  
• 消化管の左右非対称な捻転を引き起こす上皮細胞の3次元形態変化

  稲木美紀子; 瀧川大志; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本細胞生物学会大会(Web), 2019

  
• キラルな細胞変形によって駆動される組織自律的な内臓捻転の機構

  稲木美紀子; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本分子生物学会年会プログラム・要旨集(Web), 2018

  
• The size sensing mechanism of signaling molecules in a dendrite spine due to the spatial crowding effect

  松田 惇志; 井上 康博; 安達 泰治

  「センサ・マイクロマシンと応用システム」シンポジウム論文集 電気学会センサ・マイクロマシン部門 [編], 31 Oct. 2017

  
• Simulation on deformation of growing epithelial tissue constrained by surrounding tissue

  TATEO Itsuki; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2017

  
• Regulation of Chemical Reaction Process due to Mechanical Stimuli

  INOUE Yasuhiro

  Seibutsu Butsuri, 2017

  
• 細胞シートの折り畳みにコードされた3D形態

  松田佳祐; 足立晴彦; 後藤寛貴; 井上康博; 近藤滋

  日本生化学会大会(Web), 2017

  
• カブトムシ角原基における細胞シート折りたたみ構造形成メカニズム

  足立晴彦; 後藤寛貴; 松田佳祐; 井上康博; 近藤滋

  日本生化学会大会(Web), 2017

  
• 上皮細胞組織変形の三次元シミュレーションを用いたショウジョウバエ消化管の左右非対称な捻転を引き起こす細胞変形の素過程の同定

  稲木美紀子; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本細胞生物学会大会(Web), 2017

  
• 上皮細胞組織変形の三次元シミュレーションを用いたショウジョウバエ消化管の左右非対称な捻転を引き起こす細胞変形の素過程の同定

  稲木美紀子; 大久保明野; 須志田隆道; 秋山正和; 井上康博; 松野健治

  日本生化学会大会(Web), 2017

  
• 1D16 Modeling cell apoptosis for simulating three-dimensional multicellular morphogenesis

  OKUDA Satoru; INOUE Yasuhiro; ADACHI Taiji; EIRAKU Mototsugu

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2016

  
• 2D21 Simulation of morphological change in epithelial tissue considering feedback between constriction force and shape at cell level

  ENOMOTO Yoshihide; INOUE Yasuhiro; YONEMURA Shigenobu; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2016

  
• 2H14 Effects of remodeling signals on bone functional adaptation

  IMAI Kei; KAMEO Yoshitaka; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2016

  
• J0210105 Mathematical modeling of apical constriction adjustment for maintaining smooth surface of growing epithelial tissue

  ENOMOTO Yoshihide; INOUE Yasuhiro; YONEMURA Shigenobu; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2015

  
• J0210204 Influence of the balance between RANKL and OPG expression rates on the functional adaptation capacity of trabeculae

  IMAI Kei; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2015

  
• B103 Theoretical consideration of effect of molecular time constant on oscillating gene expression

  TANIGUCHI Shinji; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2015

  
• 1C41 Influence of spatially patterned mechanical cell activities on the tissue invagination

  WATANABE Tadashi; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2015

  
• M314 Mathematical modeling of cell-cell interaction maintaining smooth surface of growing epithelial tissue

  ENOMOTO Yoshihide; INOUE Yasuhiro; YONEMURA Shigenobu; ADACHI Taiji

  The Proceedings of Conference of Kansai Branch, 2015

  
• 多細胞のダイナミクスに基づいた3次元組織形成シミュレーション

  奥田覚; 井上康博; 安達泰治

  MOOK別冊「細胞の3次元組織化に不可欠な最先端材料技術―再生医療，その支援分野（細胞研究，創薬研究）への応用と発展のために」第4章4項2節, 2014

  
• 1E11 Energy between cofilin and actin in cofilin-decorated actin filament under tensile force

  FUJII Tetsuya; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2014

  
• 1E12 Influence of mechanical stimulus on mouse ES cell differentiation : Investigation based on mRNA expression levels

  FUJIMOTO Hiroshi; SUNAGA Junko; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2014

  
• 1F33 Cortical Bone Remodeling Simulation Considering Signaling Systems

  TAKENAKA Kentaro; INOUE Ysuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2014

  
• J0240102 Investigation of conditions of SMD simulation for alpha-helical proteins

  OHTO Kouhei; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2014

  
• S0210101 Contribution of Cell Proliferation and Apical Contraction on Epithelial Tissue Deformation Examined by Using a Multi-cellular Dynamics Simulation

  WATANABE Tadashi; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2014

  
• 21am2-E3 Role of spatial patterns of apical constricted cells in epithelial tissue deformations

  Inoue Yasuhiro; Watanabe Tadashi; Adachi Taiji

  The Proceedings of the Symposium on Micro-Nano Science and Technology, 2014

  
• 1E07 Study on mechanical behaviors of amino residues in actin filament as a mechano-sensor using molecular dynamics simulation

  KONDO Yoshiaki; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2013

  
• 2F16 Modeling Cell Proliferation for Simulating Tissue Morphogenesis Using Reversible Network Reconnection Model

  OKUDA Satoru; INOUE Yasuhiro; Eiraku Mototsugu; SASAI Yoshiki; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2013

  
• S021011 Reversible Network Reconnection Simulation of Effects of Apical Contractility on Curvatures of Growing Epithelia

  OKUDA Satoru; INOUE Yasuhiro; EIRAKU Mototsugu; SASAI Yoshiki; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2013

  
• J021011 Energy landscape between adjacent subunits in cofilin-decorated actin filament

  FUJII Tetsuya; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2013

  
• J021013 BMU movement analyzed by trabecular and osteonal remodeling simulation

  TAKENAKA Kentaro; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2013

  
• A107 Mechanical simulation considering diffusible biochemical factor on epithelial tissue morphogenesis

  WATANABE Tadashi; OKUDA Satoru; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2013

  
• 7PM1-A-6 Influence of a mechanical stimulus on mRNA expression during the differentiation process of mouse embryonic stem cell

  Fujimoto Hiroshi; Sunaga Junko; Adachi Taiji; Inoue Yasuhiro

  The Proceedings of the Symposium on Micro-Nano Science and Technology, 2013

  
• 4・4 バイオテクノロジー・バイオインフォマティクス バイオインフォマティクス・生体分子工学(4.バイオエンジニアリング,<特集>機械工学年鑑)

  井上 康博

  日本機械学会誌, 2013

  
• Energy Analysis of a Cofilin-decoratedactin Filament Using Molecular \nDynamics Simulations.

  Tetsuya Fujii; Yasuhiro Inoue; Taiji Adachi

  Conference on Computatinal Physics（CCP2012）（2012.10.14－18．Kobe）, 14 Oct. 2012, Peer-reviewed

  
• Modeling and Simulation of Myosin-Dependent Rearrangement and Force Generation in an Actomyosin Network

  Yasuhiro Inoue; Shunsuke Tsuda; Koji Nakagawa; Masaki Hojo; Taiji Adachi

  BIOPHYSICAL JOURNAL, Jan. 2012

  
• Large Deformation of Multicellular \nTissue during Morphogenesis Using Reversible Network Reconnection Model

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  Exciting Biologies : Forces in Biology（2012.10.4－6．Dublin, Ireland）, 2012, Peer-reviewed

  
• Mathematical Model for Large Deformations \nof Multiple-cell Aggregate during Tissue Morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  10th World Congress on Computational Mechanics（WCCM2012）（2012.7.8－13．Sao Paulo, Brazil）, 2012, Peer-reviewed

  
• Molecular Dynamics Analysis of Coupling Behaviors Between Extension and Torsion of Actin Filaments

  Shinji Matsushita; Yasuhiro Inoue; Taiji Adachi

  BIOPHYSICAL JOURNAL, Jan. 2012, Peer-reviewed

  
• J025014 Examination of mechanical behavior of actin subunits in actin filament using molecular dynamics simulation

  Kondo Yoshiaki; Matsushita Shinji; Inoue Yasuhiro; Adachi Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2012

  
• 7B41 Bone remodeling simulation focused on movements of resorption cavities

  ISHIBASHI Hiroki; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2012

  
• 7C46 Investigation of the relationship of the force generation of contractile ring and the deformation of cell membrane in cytokinesis using computational cell mechanics simulation

  NAKAGAWA Koji; INOUE Yasuhiro; OKUDA Satoru; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2012

  
• 8C43 Modeling cell division and growth in morphogenetic dynamics of tissue development

  OKUDA Satoru; INOUE Yasuhiro; EIRAKU Mototsugu; SASAI Yoshiki; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2012

  
• 8G25 Evaluation of nonlinear mechanical properties between actin subunits

  MATSUSHITA Shinji; INOUE Yasuhiro; ADACHI Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2012

  
• B110 Modeling of signaling system in trabecular bone adaptation

  Takenaka Kentaro; Inoue Yasuhiro; Adachi Taiji

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2012

  
• A201 Equilibration of cofilin-decorated actin filament using molecular dynamics simulation

  Fujii Tetsuya; Inoue Yasuhiro; Adachi Taiji

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2012

  
• OS1-1-3 Multiscale computational mechanobiology on tissue morphogenesis

  Inoue Yasuhiro; Adachi Taiji

  The Proceedings of the Symposium on Micro-Nano Science and Technology, 2012

  
• P-OS3-2 Molecular dynamics simulation of tensile force induced conformational change of an actin accessory protein binding residues in actin filament

  Kondo Yoshiaki; Inoue Yasuhiro; Adachi Taiji

  The Proceedings of the Symposium on Micro-Nano Science and Technology, 2012

  
• Rearrangement Dynamics of Contractile Actomyosin Network.

  Yasuhiro Inoue; Taiji Adachi

  10th World Congress on Computational Mechanics（WCCM2012）（2012.7.8－13．Sao Paulo, Brazil）, 2012, Peer-reviewed

  
• Molecular Dynamics Simulation of an Actin Filament.

  Yasuhiro Inoue; Shinji Matsushita; Taiji Adachi

  KSMEJSME Joint Symposium on Computational Mechanics & CAE 2012, Mechanical Engineering Congress, JSME（2012.9.12．Kanazawa）（Symposium）, 2012, Peer-reviewed

  
• Simulations of Large Deformation \nduring Tissue Morphogenesis Using Reversible Network Reconnection Model．

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  日本生物物理学会第50 回年 会（2012.9.22－24．名古屋）, 2012, Peer-reviewed

  
• Molecular Dynamics Model of Cofilactin Filament

  Tetsuya Fujii; Yasuhiro Inoue; Taiji Adachi

  日本生物物理学 会第50 回年会（2012.9.22－24．名古屋）, 2012, Peer-reviewed

  
• Three-dimensional Vertex Model \nfor Morphogenesis of Multiple-cell Tissue with Physical and Topological Consistency.

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  CDB Symposium 2012 : Quantitative Developmental Biology, RIKEN Center for Developmental Biology（2012.3.26－28．Kobe）, 2012, Peer-reviewed

  
• Mathematical Modeling and Simulation of Mechanical \nBehavior of Cell during Cytokinesis.

  Koji Nakagawa; Yasuhiro Inoue; Satoru Okuda; Taiji Adachi

  International Symposium on Cellular Mechanobiology（2012.3.16． Kyoto）, 2012, Peer-reviewed

  
• Three-Dimensional Vertex Model \nfor Simulating Large Deformation of Cell Aggregates during Tissue Morphogenesis

  Satoru Okuda; Yasuhiro Inoue; Mototsugu Eiraku; Yoshiki Sasai; Taiji Adachi

  International Symposium on Cellular Mechanobiology（2012.3.16．Kyoto）, 2012, Peer-reviewed

  
• Trabecular Remodeling Simulation Considering \nBone Remodeling Cycle.

  Kentaro Takenaka; Hiroki Ishibashi; Yasuhiro Inoue; Taiji Adachi

  International Symposium on Cellular Mechanobiology（2012.3.16．Kyoto）, 2012, Peer-reviewed

  
• Molecular Dynamics Simulation Study of Mechanical \nBehavior of Actin Subunits in the Actin Filament.

  Yoshiaki Kondo; Shinji Matsushita; Yasuhiro Inoue; Taiji Adachi

  International Symposium on Cellular Mechanobiology（ 2012.3.16．Kyoto）, 2012, Peer-reviewed

  
• 形態形成ダイナミクスのマルチスケール計算メカノバイオロジー

  井上康博; 安達泰治

  日本械学会第4 回マイクロ・ナノ工学シンポジウム（2012.10.22－24．北九州）, 2012, Peer-reviewed

  
• 骨梁リモデリングにおけるシグナル伝達機構の数理モデル化

  竹中健太郎; 井上康博; 安達泰治

  日本機械学会第 23 回バイオフロンティア講演会（2012.10.5－6．弘前）, 2012, Peer-reviewed

  
• 形態形成過程における多細胞組織の大変形シミュレーショ ンのためのリバーシブル・ネットワーク・リコネクションモデル

  奥田覚; 井上康博; 永樂元次; 笹井芳樹; 安達泰治

  日本数理生物学会第22 回大会（2012.9.10 －12．岡山）．, 2012, Peer-reviewed

  
• アクチンバイオメカニクスシミュレーションでわかった細胞の力学－生化学連成のしくみ

  井上康博; 安達泰治

  第17 回計算工学講演会（2012.5.29－31．京都）, 2012, Peer-reviewed

  
• 吸収腔の移動に着目した骨リモデリングシミュレーション

  石橋弘輝; 井上康博; 安達泰治

  日本機械学会第24 回バイオエンジニアリング部門講演会（2012.1.7－8．豊中）, 2012, Peer-reviewed

  
• 組織発生の形態形成過程における細胞の分裂と成長のモデル化

  奥田覚; 井上康博; 永樂元次; 笹井芳樹; 安達泰治

  日本機械学会第24 回バイオエンジニアリング部門講演会（2012.1.7－8．豊中）, 2012, Peer-reviewed

  
• アクチンサブユニット間の非線形力学特性の評価

  松下慎二; 井上康博; 安達泰治

  日本機械学会第24 回バイオエンジニアリング講演会（2012.1.7－8．豊中）, 2012, Peer-reviewed

  
• Simulation of Membrane Protrusion on Cellular Scale using Coarse-Grained Brownian Ratchet Model

  Yasuhiro Inoue; Taiji Adachi

  BIOPHYSICAL JOURNAL, Feb. 2011

  
• 8H-15 Investigation of Relationship between Thermal Fluctuation of Actin Filament and Membrane Protrusion using Brownian Dynamics Simulation

  DEJI Takeji; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2011

  
• J025021 Mathematical Insight into Modeling Morphological Development of Sheet-Like Multicellular Tissue

  OKUDA Satoru; INOUE Yasuhiro; EIRAKU Mototsugu; SASAI Yoshiki; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2011

  
• J025022 Evaluation of extension-torsion coupling behavior of actin filament

  MATSUSHITA Shinji; INTOUE Yasuhiro; SOKABE Masahiro; ADACHI Taiji

  The Proceedings of Mechanical Engineering Congress, Japan, 2011

  
• J191024 Examination of microvoid generation using experimental model of microflow around filaments in microchannel

  MITSUYAMA Yasuchika; Yamaguchi Kohsaku; INOUE Yasuhiro; ISHIDA Kazuki; HOJO Masaki

  The Proceedings of Mechanical Engineering Congress, Japan, 2011

  
• A224 Simulation of cell shape deformation induced by contractile ring during cell divisions

  中川 光司; 井上 康博; 奥田 覚; 安達 泰治

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2011

  
• Effect of Tension on the Stiffness of Actin \nFilaments.

  Shinji Matsushita; Yasuhiro Inoue; Masahiro Sokabe; Taiji Adachi

  International Symposium on Mechanobiology（2011.11.4-8 Shanghai, China）., 2011, Peer-reviewed

  
• Extension-torsion Coupling Behavior of Single Actin Filament.

  Shinji Matsushita; Yasuhiro Inoue; Masahiro Sokabe; Taiji Adachi

  第49 回日本生物物理学会年会（2011.9.16-18 姫路）., 2011, Peer-reviewed

  
• 単繊維間樹脂流動によるボイド発生機構のマイクロ流体実験モデルによ る検討

  密山泰用; 井上康博; 石田和希; 北條正樹

  日本機械学会2011 年度年次大会（2011.9.12-15 東京）, 2011, Peer-reviewed

  
• シート状多細胞組織の形態発生に関する数理モデルの検討

  奥田 覚; 井上康博; 永樂元次; 笹井芳樹; 安達泰治

  日本機械学会2011 年度年次大会（2011.9.12-15 東京）, 2011, Peer-reviewed

  
• アクチンの力学―生化学連成による細胞運動のシミュレーション

  井上 康博

  2011. 1.18 井上 康博 （京都大学大学院工学研究科）, 2011, Peer-reviewed

  
• アクチンフィラメントの引張－ねじり連成挙動の評価

  松下慎二; 井上康博; 曽我部正博; 安達泰治

  日本機械学会 2011 年度年次大会（2011.9.12-15 東京）, 2011, Peer-reviewed

  
• V-ActinBD を用いた細胞膜突出の分子機構の検討

  井上康博; 出路丈時; 安達泰治

  理研シンポジウム：VCAD システム研究2010（VCAD の未来）（2011.3.3-4 和光）, 2011, Peer-reviewed

  
• 細胞力学シミュレーションの今後の展開

  井上康博

  理研シンポジウム：VCAD システム研究2010（VCAD の未来） （2011.3.3-4 和光）, 2011, Peer-reviewed

  
• 張力作用下におけるアクチンフィラメントの分子構造ゆらぎと力学特性

  松下慎二; 井上康博; 安達泰治

  次世代 スーパーコンピュータプロジェクト「次世代生命体統合シミュレーションソフトウェアの研究開発」シンポ ジウム: 第3 回バイオスーパーコンピューティングシンポジウム（2011.2.21-22 神戸）, 2011, Peer-reviewed

  
• Simulation Study on Dynamics of Resin-Air Interface during Resin-Air Flows between Filaments Using Phase-Field Navier-Stokes Model

  INOUE Yasuhiro; MATSUMOTO Michito; HOJO Masaki; TAKADA Naoki; ADACHI Taiji; ISHIDA Kazuki

  Journal of the Japan Society for Composite Materials, 15 May 2010

  Access this misc :

  
• Thermodynamic Model Study on the Modulation of Binding Affinity between Actin Filament and its Regulatory Proteins in Response to Mechanical Stresses

  Yasuhiro Inoue; Taiji Adachi; Masaki Hojo

  BIOPHYSICAL JOURNAL, Jan. 2010

  
• Theoretical study on mechanochemical modulation of binding between \nactin and its accessory proteins :

  Yasuhiro Inoue; Taiji Adachi; Masaki Hojo

  A thermodynamics perspective. World Congress on Biomechanics（WCB 2010）（2010.8.1－6 Singapore）, 2010, Peer-reviewed

  
• 1114 Thermodynamic relation of binding affinity of actin-regulatory protein with mechanical stress of actin filament

  INOUE yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2010

  
• 0242 Simulation of actin cytoskeleton network dynamics : Investigation of orientation change of actin cytoskeleton induced by actomyosin interaction

  TSUDA Shunsuke; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2010

  
• 343 Mode I type delamination toughness in Cu laminated YBCO coated conductor

  MIYAZATO Takafumi; HOJO Masaki; SUGANO Michinaka; ADACHI Taiji; INOUE Yasuhiro; SHIKIMACHI Kouji; HIRANO Naoki; NAGAYA Shigeo

  学術講演会講演論文集, 2010

  
• Approach Behavior of Binding Proteins Toward Actin Filament : Brownian Dynamics Simulation

  ADACHI Taiji; SHIMADA Yoshitaka; INOUE Yasuhiro; HOJO Masaki

  TRANSACTIONS OF THE JAPAN SOCIETY OF MECHANICAL ENGINEERS Series A, 2010

  
• J0206-1-1 Evaluation of extensional and torsional stiffness of actin filament using molecular dynamics simulation

  MATSUSHITA Shinji; INOUE Yasuhiro; HOJO Masaki; SOKABE Masahiro; ADACHI Taiji

  The proceedings of the JSME annual meeting, 2010

  
• J0206-1-2 Simulation of dynamic rearrangements of actomyosin network

  Inoue Yasuhiro; Tsuda Shunsuke; Adachi Taiji; Hojo Masaki

  The proceedings of the JSME annual meeting, 2010

  
• 2001 Spatiotemporal Analysis of Molecular Interaction of Actin Filament under Tensile Force

  MATSUSHITA Shinji; ADACHI Taiji; INOUE Yasuhiro; HOJO Masaki; SOKABE Masahiro

  The Proceedings of The Computational Mechanics Conference, 2010

  
• 2003 Brownian Dynamics Simulation of Membrane Protrusion Driven by Actin Polymerization

  DEJI Takeji; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of The Computational Mechanics Conference, 2010

  
• 2005 Power law dependence of contractile force on myosin density fraction in an actomyosin network

  Inoue Yasuhiro; Adachi Taiji; Hojo Masaki

  The Proceedings of The Computational Mechanics Conference, 2010

  
• 105 Analysis of Resin Flows around Filaments using Diffuse Interface Method combined with Immersed Boundary Method

  ISHIDA Kazuki; INOUE Yasuhiro; HOJO Masaki; ADACHI Taiji; TAKADA Naoki

  The Proceedings of The Computational Mechanics Conference, 2010

  
• A213 Simulation of Structural Change in the Actomyosin Filamentous System using Coarse-grained Molecular Dynamics Model

  中川 光司; 井上 康博; 安達 泰治; 北條 正樹

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2010

  
• Quantitative evaluation of mechanical \nbehaviors of actin filament under different mechanical conditions

  Shinji Matsushita; Taiji Adachi; Yasuhiro Inoue; Masaki Hojo; Masahiro Sokabe

  World Congress on Biomechanics （WCB2010）（2010.8.1－6 Singapore）, 2010, Peer-reviewed

  
• Tensile force suppresses torsional \nmotions of individual actin subunits

  Shinji Matsushita; Yasuhiro Inoue; Masaki Hojo; Masahiro Sokabe; Taiji Adachi

  日本生物物理学会第48 回年会（2010.9.20－22 仙台）, 2010, Peer-reviewed

  
• Modeling and simulation of dynamic reconstructing network of stress fibers with \nmechanical sensing through focal adhesions．

  Yasuhiro Inoue; Taiji Adachi

  日本生物物理学会第48 回年会（2010.9.20－22 仙台）, 2010, Peer-reviewed

  
• Microscale Simulation \nof Resin-Air Flow around Single Fibers.

  Yasuhiro Inoue; Michihito Matsumoto; Masaki Hojo; Kazuki Ishida; Naoki Takada; Taiji Adachi

  10th International Conference on Flow Processes in Composite Materials（FPCM10）（2010.7.11－15 Ascona, Switzerland）, 2010, Peer-reviewed

  
• アクトミオシンネットワークにおけるダイナミックな構造変化のシミュ レーション

  井上康博; 津田峻佑; 安達泰治; 北條正樹

  日本機械学会2010 年度年次大会（2010.9.5－9 名古屋）, 2010, Peer-reviewed

  
• 分子動力学法を用いたアクチンフィラメントの引張・ね じり剛性評価

  松下慎二; 安達泰治; 井上康博; 北條正樹; 曽我部正博

  日本機械学会．日本機械学会2010 年度年次大会（2010.9.5－9 名古屋）, 2010, Peer-reviewed

  
• YBCO/CeO_2 interlaminar fracture toughness in Cu laminated YBCO coated conductor

  MIYAZATO Takafumi; HOJO Masaki; SUGANO Michinaka; ADACHI Taiji; INOUE Yasuhiro; SHIKIMACHI Kouji; HIRANO Naoki; NAGAYA Shigeo

  低温工学・超電導学会講演概要集 = Meetings of Cryogenics and Superconductivity, 18 Nov. 2009

  
• Preliminary study on effect of fluid forces and interfacial tension on void formation

  松本 迪斉; 井上 康博; 北條 正樹

  JCOM講演論文集, 10 Mar. 2009

  
• A Thermodynamic Model Describing the Mechanosensitivity of Actin-cofilin Binding

  Yasuhiro Inoue; Taiji Adachi; Masaki Hojo

  BIOPHYSICAL JOURNAL, Feb. 2009

  
• 323 Structural Fluctuation and Mechanical Properties of Actin Filament

  MATSUSHITA Shinji; ADACHI Taiji; INOUE Yasuhiro; HOJO Masaki; SOKABE Masahiro

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2009

  
• 2SA3-03 Mechanical Behavior of Actin Filaments : Molecular Dynamics Simulation Study(2SA3 Structural and functional analysis of actin filament dynamics,The 47th Annual Meeting of the Biophysical Society of Japan)

  Adachi Taiji; Matsushita Shinji; Inoue Yasuhiro; Hojo Masaki; Sokabe Masahiro

  Seibutsu Butsuri, 2009

  
• 1037 Primitive chain network simulations : confinement effect of slit width between solid walls on entanglement of chains in polymer melt

  OKUDA Satoru; INOUE Yasuhiro; HOJO Masaki; MASUBUCHI Yuichi; UNEYAMA Takashi

  The Proceedings of The Computational Mechanics Conference, 2009

  
• 2010 Thermodynamic model of mechanoresponsive binding of cytoskeleton-regulatory proteins

  Inoue Yasuhiro; Adachi Taiji; Hojo Masaki

  The Proceedings of The Computational Mechanics Conference, 2009

  
• 2014 Modeling of actin filament branching for analysis of actin network dynamics

  DEJI Takeji; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of The Computational Mechanics Conference, 2009

  
• 2017 Modeling of actin cytoskeleton network dynamics induced by actomyosin interaction

  TSUDA Shunsuke; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of The Computational Mechanics Conference, 2009

  
• 2019 Effects of tensile force on interactive energy between actin subunits

  MATSUSHITA Shinji; ADACHI Taiji; INOUE Yasuhiro; HOJO Masaki; SOKABE Masahiro

  The Proceedings of The Computational Mechanics Conference, 2009

  
• Fatigue behaviour of YBCO coated conductor with Cu layer at 77K

  M. Hojo; Y. Yoshida; M. Sugano; T. Adachi; Y. Inoue; K. Shikimachi; N. Hirano; S. Nagaya

  ICCM International Conferences on Composite Materials, 2009, Peer-reviewed

  
• Fracture behavior and change of critical current due to fatigue loading in Cu-laminated YBCO coated conductor

  SUGANO Michinaka; YOSHIDA Yusuke; HOJO Masaki; ADACHI Taiji; INOUE Yasuhiro; SHIKIMACHI Koji; WATANABE Tomonori; HIRANO Naoki; NAGAYA Shigeo

  低温工学・超電導学会講演概要集 = Meetings of Cryogenics and Superconductivity, 12 Nov. 2008

  
• 315 Effect of depolymerization and severing on actin filament turnover rate : Brownian dynamics simulation

  SHIMADA Yoshitaka; ADACHI Taiji; Inoue Yasuhiro; HOJO Masaki

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2008

  
• Preliminary study on effect of interfacial dynamics on resin flow between filaments

  MATSUMOTO Michihito; INOUE Yasuhiro; HOJO Masaki

  Proceedings, ... meeting of Japan Society of Fluid Mechanics, 2008

  
• OS0615 Transport Property and Fracture Mechanism of Cu Laminated YBCO Coated Conductor Under Fatigue Loading in LN_2

  YOSHIDA Yusuke; HOJO Masaki; SUGANO Michinaka; ADACHI Taiji; INOUE Yasuhiro; NAGAYA Shigeo

  The Proceedings of the Materials and Mechanics Conference, 2008

  
• B422 Numerical study on coupling between actin polymerization and membrane deformation during cell migration

  TSUDA Shunsuke; INOUE Yasuhiro; ADACHI Taiji; HOJO Masaki

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2008

  
• 223 Proposal of a wall boundary condition for Primitive Chain Network simulations

  OKUDA Satoru; INOUE Yasuhiro; HOJO Masaki; MASUBUCHI Yuichi

  The Proceedings of The Computational Mechanics Conference, 2008

  
• 742 Brownian dynamics analysis of relationship between actin filament length and binding position of Arp2/3 complex

  SHIMADA Yoshitaka; ADACHI Taiji; Inoue Yasuhiro; HOJO Masaki

  The Proceedings of The Computational Mechanics Conference, 2008

  
• 744 Computational statistical mechanics of cooperative actin-cofilin binding induced by torsion of actin filament

  Inoue Yasuhiro; Adachi Taiji; Hojo Masaki

  The Proceedings of The Computational Mechanics Conference, 2008

  
• 746 Molecular Dynamics Analysis of Actin Filament under Tensile Force

  MATSUSHITA Shinji; ADACHI Taiji; INOUE Yasuhiro; HOJO Masaki; SOKABE Masahiro

  The Proceedings of The Computational Mechanics Conference, 2008

  
• A simulation model on cell crawling driven by actin-polymerization

  Yasuhiro Inoue; Taiji Adachi

  BIOPHYSICAL JOURNAL, Jan. 2007

  
• Brownian dynamics analysis of actin filament assembly/disassembly and severing

  Yoshitaka Shimada; Taiji Adachi; Yasuhiro Inoue; Masaki Hojo; Sadami Tsutsumi

  BIOPHYSICAL JOURNAL, Jan. 2007

  
• 432 A numerical model on actin-driven membrane deformations

  Inoue Yasuhiro; Adachi Taiji

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2007

  
• 433 Brownian dynamics analysis of relationship between actin filament severing and elongation rate

  SHIMADA Yoshitaka; ADACHI Taiji; Inoue Yasuhiro; HOJO Masaki; TSUTSUMI Sadami

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2007

  
• 434 Molecular Dynamics Analysis on Actin Filament Structure Under Tensile Force

  MATSUDA Ryo; ADACHI Taiji; INOUE Yasuhiro; SOKABE Masahiro; HOJO Masaki

  The Proceedings of the Bioengineering Conference Annual Meeting of BED/JSME, 2007

  
• A205 Torsional behavior of actin filament by using molecular dynamics method

  MATSUSHITA Shinji; ADACHI Taiji; INOUE Yasuhiro; SOKABE Masahiro; HOJO Masaki

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2007

  
• S15A3 Multiscale Modeling and Simulation of Actin Filament Dynamics(Mutli-scale simulations for understanding biological phenomena)

  Adachi Taiji; Inoue Yasuhiro; Shimada Yoshitaka; Matsushita Shinji; Hojo Masaki

  Seibutsu Butsuri, 2007

  
• 2207 A numerical analysis on lamellipodial protrusions driven by the actin-polymerization

  Inoue Yasuhiro; Adachi Taiji

  The Proceedings of The Computational Mechanics Conference, 2007

  
• 513 A mesoscopic simulation model for self-assembling amphiphilic molecules

  Inoue Yasuhiro; Takagi Shu; Matsumoto Yoichiro

  The proceedings of the JSME annual meeting, 2005

  
• 2902 Stochastic rotation dynamics simulation of amphiphilic molecules

  Inoue Yasuhiro; Takagi Shu; Matsumoto Yoichiro

  The Proceedings of The Computational Mechanics Conference, 2005

  
• A real-coded lattice gas simulation on flows of vesicles at the orthogonal bifurcation

  Inoue Yasuhiro; Takagi Shu; Matsumoto Yoichiro

  The proceedings of the JSME annual meeting, 2004

  
• A mesoscopic simulation on flows of red blood cells at micro branches

  INOUE Yasuhiro; TAKAGI Shu; MATSUMOTO Yoichiro

  The Proceedings of the JSME Conference on Frontiers in Bioengineering, 2003

  
• A mesoscopic simulation model for the microcirculation

  井上 康博; 陳 〓; 大橋 弘忠

  Proceedings of the JSME Bioengineering Conference and Seminar, 2002

  
• RLG Simulation of non-Newtonian fluid flow

  INOUE Yasuhiro; CHEN Yu; OHASHI Hirotada

  Proceedings of the conference on computational engineering and science, 24 May 2000

  

Presentations

• Mathematical modeling of epithelial folding with cell proliferation depending on the curvature of the tissue

  Kentaro Morikawa; Yasuhiro Inoue

  5th Computational Chemistry Symposium, May 2019

  
• Folding pattern formation in a confined epithelial cell sheet

  Yasuhiro Inoue

  第５６回日本生物物理学会, Sep. 2018

  
• Mechanochemical interplays in multicellular dynamics during tissue morphogenesis

  Yasuhiro Inoue

  The Second Workshop on Microscopic Simulation and Cell Experiments for Biological Systems, Feb. 2018, Invited

  
• Multiscale interplay between intracellular and multicellular dynamics in tissue morphogenesis

  Yasuhiro Inoue

  2017 Cellular and Molecular Bioengineering Conference（, Jan. 2017, Invited

  
• Three-dimensional vertex simulation of multicellular dynamics for understanding mechanics of epithelial tissue morphogenesis

  Yasuhiro Inoue

  Bioimage Informatics Conference 2016（, Oct. 2016, Invited

  
• Mechanochemical coupling between tissue deformation and gene expression based on cell shape

  Yasuhiro Inoue

  MBI-Japan Joint Symposium on Mechanobiology of Development and Multicellular Dynamics, Dec. 2014, Invited

  
• Role of spatial pattern of contracting cells in tissue invagination

  Yasuhiro Inoue

  The 62nd NIBB Conference Force in Development, Nov. 2014, Invited

  
• Simulation of dynamic formation of actomyosin functional structure

  Yasuhiro Inoue; Taiji Adachi

  7th World Congress on Biomechanics, Jul. 2014, Invited

  
• 形態形成における力学－生化学連成を考慮した３次元組織変形の数理モデリング・シミュレーション

  井上 康博; 奥田覚; 渡辺惟史; 安達泰治

  第３６回日本分子生物学会ワークショップ（新しいメカノバイオロジーを目指す工学と生物学の融合）, Dec. 2013, Invited

  
• Computational biophysics on epithelial tissue deformation: from molecular to tissue scale

  Yasuhiro Inoue; Satoru Okuda; Tetsuya Fujii; Kohei Ohto; Taiji Adachi

  第５１回日本生物物理学会年会, Oct. 2013, Invited

  
• 多細胞力学系のマルチスケールシミュレーション

  第30回数理医学セミナー, 25 Dec. 2012, 日本応用数理学会数理医学研究部会, Invited

  
• アクチン細胞骨格の動力学シミュレーション

  第４回JSBi応用システムバイオロジー研究会, 07 Nov. 2011, 日本バイオインフォマティクス学会(JSBi), Invited

  
• Particulate-based simulation of myosin-dependent rearrangement dynamics of actomyosin networks

  International Symposium on Mechanobiology, 06 Nov. 2011, Shanghai Society of Biophysics, Invited

  
• アクチン細胞骨格のバイオメカニクスシミュレーション

  信州大学超精密技術研究センター第１４回講演会, 02 Sep. 2011, 信州大学超精密応用解析研究グループ, Invited

  
• Theoretical Study on Mechanochemical Modulation of Binding between Actin and its Accessory Proteins: A Thermodynamic Perspective

  6th World Congress on Biomechanics, 03 Aug. 2010, IFMBE, Invited

  
• 拡散界面モデルを用いた単繊維スケール樹脂流動解析の紹介

  第6回複合材料セミナー, Apr. 2010, 東北大学複合材料研究センター, Invited

  
• アクチンフィラメントのねじりによるコフィリン－アクチン結合阻害作用の熱力学的考察

  第237回材料力学談話会, Oct. 2009, 日本材料学会, Invited

  
• 複雑流体の微視的な粒子モデル

  MultiScale Simulations for Softmatters(MSS)セミナー, Jan. 2008, 京都大学, Invited

  
• 脂質膜のマルチスケール解析 -ドラッグデリバリーシステムに向けて-

  エンレイソウの会, Oct. 2005, 北海道大学21世紀COEプログラムトポロジー理工学の創成, Invited

  
• Introduction to the Real-coded Lattice Gas Model of Colloidal Systems

  Particle-Based Mesoscale Simulation Techniques Symposium, 01 Apr. 2004, University of Minnesota

  
• Computer simulation by GM

  The meeting on intracranial stents (ICS), Jun. 2003, Hospital University of Geneva, Invited

  

Books and Other Publications

• 23の先端事例がつなぐ計算科学のフロンティア : 計算で物事を理解する予測する

  理化学研究所中村特別研究室; 中村, 振一郎; 牧野内, 昭武; 安達, 泰治; 杉本, 学

  近代科学社, 2020

  Find Kyoto University's collection of books :

  
• 生命科学で使えるはじめての数理モデルとシミュレーション

  鈴木 貴; 久保田 浩行

  羊土社, 2017, Not refereed

  Find Kyoto University's collection of books :

  
• 細胞のマルチスケールメカノバイオロジー

  佐藤, 正明( 工学); 安達, 泰治; 松下, 慎二; 井上, 康博; 平田, 宏聡; 曽我部, 正博; 出口, 真次; 安藤, 譲二; 山本, 希美子; 谷下, 一夫; 須藤, 亮, Joint work

  森北出版, 2017, Not refereed

  Find Kyoto University's collection of books :

  
• メカノバイオロジー : 細胞が力を感じ応答する仕組み

  曽我部 正博

  化学同人, 2015, Not refereed

  Find Kyoto University's collection of books :

  

Awards

• 10 Mar. 2011

  RIKEN, RIKEN Research Incentive Award
• 24 Feb. 2016

  Institute for Frontier Medical Sciences, Kyoto University, Nagaishi Award
• 30 Sep. 2017

  Kyoto University URA, Kyoto University Academic Day Award

External funds: Kakenhi

• 生物の面構造を作る折り畳みと展開の力学

  Grant-in-Aid for Transformative Research Areas (A)

  Transformative Research Areas, Section (III)

  Kyoto University

  井上 康博

  From 19 Nov. 2020, To 31 Mar. 2025, Granted

  多細胞力学シミュレーション;折り畳みと展開;生物の面構造;計算力学;生物物理学;折り畳み構造物;生物の面構造の３Ｄ変化;シート変形;計算機シミュレーション

  https://kaken.nii.ac.jp/grant/KAKENHI-PLANNED-20H05947/
• 形態形成の原理の解明と工学への展開

  Grant-in-Aid for Transformative Research Areas (A)

  Transformative Research Areas, Section (III)

  Kyoto University

  井上 康博

  From 19 Nov. 2020, To 31 Mar. 2025, Granted

  発生学;分子生物学;生物物理学;物理工学;設計工学;数理生物学

  https://kaken.nii.ac.jp/grant/KAKENHI-ORGANIZER-20H05941/
• Material properties determine body shapes and their constructions

  Grant-in-Aid for Transformative Research Areas (A)

  From 19 Nov. 2020, To 31 Mar. 2025

  https://kaken.nii.ac.jp/grant/KAKENHI-AREA-20A306/
• Virtual laboratory to accelerate international collaboration on 3D morphological logic

  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

  Biological Sciences

  Osaka University

  Shigeru Kondo

  From 06 Nov. 2015, To 31 Mar. 2021, Project Closed

  形態形成;3次元;折り紙;回転;数理モデル;3D形態形成;シミュレ―ション;折り畳み;クチクラ;培養細胞の回転;昆虫;体節;外骨格;シミュレーション;３次元;物理計測;三次元;発生;力学;３Ｄ形態;メカノバイオロジー;システムバイオロジー

  https://kaken.nii.ac.jp/grant/KAKENHI-INTERNATIONAL-15K21726/
• Nano-mechanical Behaviors of Tension-sensoring Proteins

  Grant-in-Aid for Challenging Exploratory Research

  Kyoto University

  Taiji Adachi

  From 01 Apr. 2015, To 31 Mar. 2017, Project Closed

  張力感受センサー分子;ナノ構造力学試験;原子間力顕微鏡;ナノバイオメカニクス;αカテニン;ナノ力学試験;ナノフィッシング;分子動力学解析

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-15K13832/
• Mathematical and Mechanical principles of the formation of three-dimensional shapes in multicellular tissues

  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

  Biological Sciences

  Kyoto University

  Yasuhiro Inoue

  From 29 Jun. 2015, To 31 Mar. 2020, Project Closed

  形態形成;上皮組織;多細胞力学;数理モデル;シミュレーション;計算力学;成虫原基;折り畳み;生物物理学;多細胞動力学;生物物理;計算物理

  https://kaken.nii.ac.jp/grant/KAKENHI-PLANNED-15H05861/
• 3D morphologic

  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

  Biological Sciences

  Osaka University

  Shigeru Kondo

  From 29 Jun. 2015, To 31 Mar. 2020, Project Closed

  形態形成;3次元;折り紙;回転;数理モデル;３D形態形成;折り畳み;シミュレ―ション;３次元;シミュレーション;物理計測;三次元;細胞運動;カブトムシ;形態;３D;発生;数理;工学;CTスキャン;班会議;合宿;３Ｄ;計算科学;物理測定;バーチャル研究所;数理生物学

  https://kaken.nii.ac.jp/grant/KAKENHI-ORGANIZER-15H05856/
• Simulation on tissue formation through intercellular interaction

  Grant-in-Aid for Young Scientists (A)

  Kyoto University

  Yasuhiro Inoue

  From 01 Apr. 2013, To 31 Mar. 2016, Project Closed

  細胞間相互作用;メカノフィードバック;メカノセンシング;数理モデル;形態形成;細胞収縮

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-25702025/
• 力学－生化学連成から創発する形態形成ダイナミクスの数理モデリング

  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

  Biological Sciences

  Kyoto University

  井上 康博

  From 01 Apr. 2013, To 31 Mar. 2015, Project Closed

  力学－生化学連成;形態形成;組織立体構造

  https://kaken.nii.ac.jp/grant/KAKENHI-PUBLICLY-25127707/
• Development of soft active composites by control of crystalline structure and interfacial molecular morphology

  Grant-in-Aid for Challenging Exploratory Research

  Kyoto University

  Masaki HOJO

  From 01 Apr. 2011, To 31 Mar. 2013, Project Closed

  ソフトアクティブマテリアル;複合材料;分子力学;ガラス転移過程

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-23656082/
• 形態形成ダイナミクスのマルチスケールメカノバイオロジー解析手法の構築

  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

  Biological Sciences

  Kyoto University

  井上 康博

  From 01 Apr. 2011, To 31 Mar. 2013, Project Closed

  メカノバイオロジー;形態形成;シミュレーション;マルチスケール;発生・分化

  https://kaken.nii.ac.jp/grant/KAKENHI-PUBLICLY-23127506/
• 骨細胞の力学刺激感知・情報伝達による機能的適応のメカノバイオロジー

  Grant-in-Aid for Scientific Research (C)

  Kyoto University

  安達 泰治

  From 01 Apr. 2010, To 31 Mar. 2011, Project Closed

  メカノバイオロジー;骨細胞;力学刺激応答;機能的適応;バイオメカニクス;骨;ナノバイオ

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22616003/
• Molecular dynamics study on actin filament structure for revealing actin filament mechanosensing

  Grant-in-Aid for Scientific Research (C)

  Kyoto University

  Yasuhiro INOUE

  From 01 Apr. 2010, To 31 Mar. 2013, Project Closed

  アクチンフィラメント;メカノバイオロジー;メカノセンサー;分子動力学シミュレーション;分子動力学;シミュレーション;in silico;アクチン;分子構造ダイナミクス;熱ゆらぎ

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22616002/
• Investigation of resin impregnation in composite materials using coarse-grained molecular dynamics and experimental nano-engineering

  Grant-in-Aid for Scientific Research (B)

  Kyoto University

  Masaki HOJO

  From 01 Apr. 2010, To 31 Mar. 2013, Project Closed

  複合材料;材料プロセス;成形;高分子;フェイズフィールド法;マイクロ流路;ボイド;機械材料・材料力学;複合材料・物性;高分子構造・物性;粗視化分子動力学

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22360048/
• 固体壁面上のからみあい高分子ダイナミクスから発現する束縛ナノ構造の研究

  Grant-in-Aid for Challenging Exploratory Research

  Kyoto University

  北條 正樹

  From 01 Apr. 2009, To 31 Mar. 2011, Project Closed

  機械材料・材料力学;高分子構造・物性;複合材料・物性;レオロジー;計算力学;粗視化分子動力学;界面;PCNモデル

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-21656032/
• 骨細胞ネットワークの形態異方性にもとづくスマート材料の提案

  Grant-in-Aid for Exploratory Research

  Kyoto University

  北條 正樹

  From 01 Apr. 2007, To 31 Mar. 2009, Project Closed

  機械材料・材料力学;生体材料;生物・生体工学;シグナル伝達;複合材料・物性;多孔質弾性論;骨リモデリング;数理モデリング

  https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-19656031/

External funds: others

• ナノ形態解析によるシナプス動態制御システムの解明

  CREST

  From 01 Oct. 2014, To 31 Mar. 2020

  岡部 繁男（東京大学）

Education

Teaching subject(s)

• From 01 Apr. 2024, To 31 Mar. 2025

  Applied Mathematics for Engineering F3

  2075, Fall, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Biomechanical Engineering

  5301, Fall, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Statistical Thermodynamics

  5073, Spring, Faculty of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Applied mathematical sciences

  G061, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Applied Dynamics

  G047, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Applied Numerical Methods

  G001, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Basic Seminar on Micro Engineering A

  G223, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Seminar on Micro Engineering B

  G217, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Seminar on Micro Engineering A

  G216, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Basic Seminar on Micro Engineering B

  G224, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering F

  V215, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering B

  V211, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering A

  V210, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Seminar: Dynamics of Atomic Systems

  Q610, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering E

  V214, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering D

  V213, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Advanced Exercise in Micro Engineering C

  V212, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2024, To 31 Mar. 2025

  Master's Thesis

  G299, Year-long, Graduate School of Engineering, 0
• From 01 Apr. 2024, To 31 Mar. 2025

  Experiments on Micro Engineering, Adv. II

  G228, Year-long, Graduate School of Engineering, 4
• From 01 Apr. 2024, To 31 Mar. 2025

  Experiments on Micro Engineering, Adv. I

  G226, Year-long, Graduate School of Engineering, 4
• From 01 Apr. 2023, To 31 Mar. 2024

  Biomechanical Engineering

  5301, Fall, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Introduction to Engineering Science A

  5110, Spring, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Statistical Thermodynamics

  5073, Spring, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Applied Mathematics for Engineering F3

  2075, Fall, Faculty of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Seminar: Dynamics of Atomic Systems

  Q610, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Applied mathematical sciences

  G061, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Applied Dynamics

  G047, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Applied Numerical Methods

  G001, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2023, To 31 Mar. 2024

  Mechanical and System Engineering Laboratory 1

  5056, Fall, Faculty of Engineering, 1
• From 01 Apr. 2023, To 31 Mar. 2024

  Mechanical and System Engineering Laboratory 1

  5056, Spring, Faculty of Engineering, 1
• From 01 Apr. 2022, To 31 Mar. 2023

  Statistical Thermodynamics

  5073, Spring, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Applied mathematical sciences

  G061, Fall, Graduate School of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Mechanical and System Engineering Laboratory 1

  5056, Fall, Faculty of Engineering, 1
• From 01 Apr. 2022, To 31 Mar. 2023

  Seminar: Dynamics of Atomic Systems

  Q610, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Applied Dynamics

  G047, Spring, Graduate School of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Mathematical Description of Natural Phenomena

  N112, Spring, Institute for Liberal Arts and Sciences, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Mechanical and System Engineering Laboratory 1

  5056, Spring, Faculty of Engineering, 1
• From 01 Apr. 2022, To 31 Mar. 2023

  Applied Mathematics for Engineering F3

  2075, Fall, Faculty of Engineering, 2
• From 01 Apr. 2022, To 31 Mar. 2023

  Applied Numerical Methods

  G001, Spring, Graduate School of Engineering, 2
• From Apr. 2011, To Mar. 2012

  生体分子動力学

  Fall, 工学研究科
• From Apr. 2011, To Mar. 2012

  工業数学Ｆ３（機）

  Fall, 工学部
• From Apr. 2011, To Mar. 2012

  機械システム工学実験１（機）

  Spring, 工学部
• From Apr. 2012, To Mar. 2013

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2012, To Mar. 2013

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2012, To Mar. 2013

  Introduction to Engineering Science A

  Fall, 工学部
• From Apr. 2012, To Mar. 2013

  Biomolecular Dynamics

  Fall, 工学研究科
• From Apr. 2013, To Mar. 2014

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2013, To Mar. 2014

  Introduction to Engineering Science A

  Spring, 工学部
• From Apr. 2013, To Mar. 2014

  Biomolecular Dynamics

  Fall, 工学研究科
• From Apr. 2013, To Mar. 2014

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2013, To Mar. 2014

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2014, To Mar. 2015

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2014, To Mar. 2015

  Biomolecular Dynamics

  Fall, 工学研究科
• From Apr. 2014, To Mar. 2015

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2014, To Mar. 2015

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2014, To Mar. 2015

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2015, To Mar. 2016

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2015, To Mar. 2016

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2015, To Mar. 2016

  Advanced Course in Multicellular Network

  Spring, 生命科学研究科
• From Apr. 2015, To Mar. 2016

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2015, To Mar. 2016

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2015, To Mar. 2016

  Biomolecular Dynamics

  Fall, 工学研究科
• From Apr. 2016, To Mar. 2017

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2016, To Mar. 2017

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2016, To Mar. 2017

  Advanced Course in Multicellular Network

  Fall, 生命科学研究科
• From Apr. 2016, To Mar. 2017

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2016, To Mar. 2017

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2016, To Mar. 2017

  Biomolecular Dynamics

  Fall, 工学研究科
• From Apr. 2017, To Mar. 2018

  Biomechanics

  Fall, 工学研究科
• From Apr. 2017, To Mar. 2018

  Biomechanics

  Fall, 総合生存学館
• From Apr. 2017, To Mar. 2018

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2017, To Mar. 2018

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2017, To Mar. 2018

  Advanced Course in Multicellular Network

  Spring, 生命科学研究科
• From Apr. 2017, To Mar. 2018

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2017, To Mar. 2018

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2018, To Mar. 2019

  Biomechanics

  Fall, 工学研究科
• From Apr. 2018, To Mar. 2019

  Biomechanics

  Fall, 総合生存学館
• From Apr. 2018, To Mar. 2019

  Introduction to Biomedical Engineering

  Spring, 全学共通科目
• From Apr. 2018, To Mar. 2019

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2018, To Mar. 2019

  Advanced Course in Multicellular Network

  Fall, 生命科学研究科
• From Apr. 2018, To Mar. 2019

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2018, To Mar. 2019

  Micro/Nano Scale Material Engineering

  Spring, 工学研究科
• From Apr. 2019, To Mar. 2020

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2019, To Mar. 2020

  Advanced Course in Multicellular Network

  Spring, 生命科学研究科
• From Apr. 2019, To Mar. 2020

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2019, To Mar. 2020

  Applied Numerical Methods

  Spring, 工学研究科
• From Apr. 2019, To Mar. 2020

  Applied mathematical sciences

  Fall, 工学研究科
• From Apr. 2019, To Mar. 2020

  Mechanical and System Engineering Laboratory 1

  Spring, 工学部
• From Apr. 2019, To Mar. 2020

  Mechanical and System Engineering Laboratory 1

  Fall, 工学部
• From Apr. 2019, To Mar. 2020

  Mechanical and System Engineering Laboratory 2

  Spring, 工学部
• From Apr. 2020, To Mar. 2021

  Seminar on Micro Engineering A

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Seminar on Micro Engineering B

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Mechanical Engineering

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Basic Seminar on Micro Engineering A

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Basic Seminar on Micro Engineering B

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2020, To Mar. 2021

  Applied Numerical Methods

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Applied mathematical sciences

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Mechanical and System Engineering Laboratory 1

  Spring, 工学部
• From Apr. 2020, To Mar. 2021

  Mechanical and System Engineering Laboratory 1

  Fall, 工学部
• From Apr. 2020, To Mar. 2021

  Experiments on Micro Engineering, Adv. I

  Year-long, 工学研究科
• From Apr. 2020, To Mar. 2021

  Experiments on Micro Engineering, Adv. II

  Year-long, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering A

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering B

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering C

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering D

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering E

  Spring, 工学研究科
• From Apr. 2020, To Mar. 2021

  Advanced Exercise in Micro Engineering F

  Fall, 工学研究科
• From Apr. 2020, To Mar. 2021

  Master's Thesis

  Year-long, 工学研究科
• From Apr. 2021, To Mar. 2022

  Seminar: Dynamics of Atomic Systems

  Spring, 工学研究科
• From Apr. 2021, To Mar. 2022

  Applied Mathematics for Engineering F3

  Fall, 工学部
• From Apr. 2021, To Mar. 2022

  Applied Numerical Methods

  Spring, 工学研究科
• From Apr. 2021, To Mar. 2022

  Applied mathematical sciences

  Fall, 工学研究科
• From Apr. 2021, To Mar. 2022

  Mechanical and System Engineering Laboratory 1

  Spring, 工学部
• From Apr. 2021, To Mar. 2022

  Mechanical and System Engineering Laboratory 1

  Fall, 工学部
• From Apr. 2021, To Mar. 2022

  Statistical Thermodynamics

  Spring, 工学部
• From Apr. 2021, To Mar. 2022

  Mathematical Description of Natural Phenomena

  Spring, 全学共通科目

Participation in PhD Defense

• 哲学的考察に基づく生物の形態形成の数理的理解

  MORIKAWA KENTARO, Graduate School of Engineering, Chief Examiner

  25 Mar. 2024
• 骨形態形成における多細胞動態の連続体力学解析

  YOKOYAMA YUKA, Graduate School of Engineering, Sub-chief Examiner

  25 Mar. 2024
• Design Optimization and Plan Optimization for Particle Beam Therapy Systems

  SAKAMOTO YUSUKE, Graduate School of Engineering, Sub-chief Examiner

  23 Jan. 2024
• Theoretical study on dynamic behaviors of magnetic skyrmions from multi-physics phase-field simulations

  WANG YU, Graduate School of Engineering, Sub-chief Examiner

  25 Sep. 2023
• 焦点接着斑を介した力学刺激に対する骨芽細胞と骨細胞の感知・応答特性

  NAKAO NOBUHIKO, Graduate School of Engineering, Sub-chief Examiner

  23 Mar. 2023
• 層状組織形成過程におけるマウス胚性幹細胞の多能性状態の領域特異性

  ANDO YUTA, Graduate School of Engineering, Sub-chief Examiner

  23 May 2022
• Mechanical engineering of ferroelectric nanostructures by dislocations in strontium titanate

  MASUDA KAIRI, Graduate School of Engineering, Sub-chief Examiner

  24 Sep. 2021
• 熱硬化性CFRPの一方向配向中間基材における硬化過程の変形特性に関する研究

  NAITO YUTA, Graduate School of Engineering, Sub-chief Examiner

  23 Mar. 2022
• Measurement and Design of Flexural Rigidity of Microtubules and Their Application to Control Microtubule Collective Motions

  Zhou, Hang, Graduate School of Engineering, Sub-chief Examiner

  23 Mar. 2022
• 分子構造ダイナミクス解析によるアクチンフィラメントの力学挙動の評価

  松下　慎二, Sub-chief Examiner

  26 Mar. 2012
• Multicellular Biomechanical Simulation of Tissue Morphogenesis(組織の形態形成過程における多細胞バイオメカニクスシミュレーション)

  奥田　覚, Sub-chief Examiner

  25 Mar. 2013
• 免疫シグナルアダプター分子SLP-76の複合体形成と機能：1分子追跡による解明

  吉田　謙太, Sub-chief Examiner

  23 Mar. 2015
• On-chip Electrophoretic Fractionation of Cytoplasmic and Nuclear RNA from Single Cells(オンチップ電気泳動を用いた１細胞の細胞質RNAおよび核RNAの分画)

  MAHMOUD NADY ABDELMOEZ ATTA, Chief Examiner

  24 Sep. 2019
• 1分子ナノパターニング法を用いたキネシンの協働性評価に関する研究

  金子　泰洸ポール, Sub-chief Examiner

  23 Jan. 2020
• 細胞活動から生じる組織形態形成の連続体力学研究

  竹田　宏典, Sub-chief Examiner

  23 Mar. 2021
• Dissecting gene expression of single cells ｗith reduced perturbation(摂動を抑えた1細胞の遺伝子発現解析)

  SUBRAMANIAN PARIMALAM SANGAMITHIRAI, Sub-chief Examiner

  23 Mar. 2021

Student achievements: Awards

• 日本機械学会第36回バイオエンジニアリング講演会優秀ポスター表彰​

  Kentaro Morikawa, 日本機械学会バイオエンジニアリング部門, 12 May 2024
• 日本機械学会機素潤滑部門奨励賞

  Yoshihiko Matsumoto, 日本機械学会機素潤滑部門, 22 Apr. 2024
• 日本機械学会第 34 回バイオフロンティア講演会 若手優秀講演表彰

  Takumi Nakamura, 日本機械学会バイオエンジニアリング部門, 16 Dec. 2023
• 日本機械学会第35回バイオエンジニアリング講演会Outstanding Presentation表彰

  Kentaro Morikawa, 日本機械学会バイオエンジニアリング部門, 04 Jun. 2023
• Best Poster Presentation Award

  Yuki Nemoto, NICOGRAPH International 2022, 05 Jun. 2022
• 優秀講演賞

  石田和希, 日本機械学会 関西支部, Mar. 2009
• 優秀講演賞

  密山 泰用, 日本機械学会　関西支部, Mar. 2010
• 若手講演優秀フェロー賞

  密山 泰用, 日本機械学会, Oct. 2011
• Outstanding Poster Presentation表彰

  立尾　樹, 日本機械学会 バイオエンジニアリング部門, 15 Dec. 2017
• 吉田卒業研究・論文

  根本悠樹, 京都大学大学院工学研究科, 26 May 2021

Administration

School management (title, position)

• From 01 Jul. 2011, To 30 Jun. 2013

  国際交流委員会 委員
• From 01 Jul. 2013, To 30 Jun. 2015

  国際交流委員会 委員
• From 01 Jul. 2011, To 30 Jun. 2015

  国際交流委員会 委員
• From 01 Jul. 2013, To 30 Jun. 2015

  国際交流委員会 委員
• From 01 Jul. 2015, To 31 Mar. 2016

  国際交流委員会委員
• 部局情報システム副技術責任者

Faculty management (title, position)

• 国際交流委員会　委員
• ネットワーク・情報セキュリティ委員会　委員
• From 01 Oct. 2016

  情報セキュリティ委員会　委員
• From 01 Oct. 2016

  広報委員会　委員
• From 01 Apr. 2020, To 31 Mar. 2021

  マイクロエンジニアリング専攻長

Academic, Social Contribution

Committee Memberships

• From 01 Apr. 2019, To 31 Mar. 2022

  -, -
• From 01 Apr. 2019

  -, The Japan Society of Mechanical Engineers
• From 01 Apr. 2015, To 31 Mar. 2019

  -, The Japan Society of Mechanical Engineers
• From 01 Apr. 2014, To 31 Mar. 2016

  -, -
• From 01 Apr. 2012, To 31 Mar. 2014

  -, -

Social Contribution

• -

  Other

  -, From 20 May 2019