Development of analytical strategy for phosphoproteomics and its application to the analysis of protein functions
Overview of the research
My research field is phosphoproteome analysis and I'm conducting the development of novel analytical strategy. My main research target is to elucidate the relationships between phosphoproteome and protein structures and between phosphoproteome and protein functions.
Research Interests
Protein phosphorylation
Liquid chromatography
Mass spectrometry
Proteomics
Research Areas
Life sciences, Genomics
Papers
The HBV basal core promoter mutation confers a replicative advantage and transcriptionally reprograms hepatocytes toward HCC subtypes
Leon L Seifert; Georgios Dangas; Hoyin Chu; Yingpu Yu; Kosuke Ogata; Xupeng Hong; Mengyin Zhang; Yichen Zhou; Chenhui Zou; Alireza Ramandi; Corrine Quirk; Evgenia Moschogianni; Catherine A Freije; Antonis Athanasiadis; Leonardo Gonzales; Luis Chiriboga; Clifton Fulmer; Hong Hur; Manoj Kandpal; Anna S Lok; Caleb Lareau; William M Schneider; Charles M Rice; Eleftherios Michailidis; Ype P de Jong
23 Sep. 2026
A Multi-Omics Framework Reveals Phosphorylation-Dependent Control of Protein Interactions
Kosuke Ogata; Emmanuel Matabaro; Ellen Aarts; Jürgen Jänes; Yasushi Ishihama; Pedro Beltrao
14 Jul. 2026
Light‐Activated Protein‐Imprinted Hydrogels Capable of Translating Protein Surface Accessibility Into Missing‐Peptide Footprints
Kosuke Ogata; Antonis Athanasiadis; Leon Seifer; George Dangas; Yingpu Yu; Christopher Jones; Taylor Shue; Alfred Jiang; Chenhui Zou; Corrine Quirk; Kelly-Marie Powel; William M. Schneider; Charles M. Rice; Ype P. de Jong; Yasushi Ishihama; Lefteris Michailidis
第46回日本分子生物学会年会, 07 Dec. 2023
学習済み大規模タンパク質言語モデルによるペプチドのイオン移動度の予測
小形公亮; 中井彩乃; 田中利幸; 石濱泰
第43回キャピラリー電気泳動シンポジウム (SCE2023), 01 Dec. 2023
酵素反応効率に基づくプロテオーム規模基質タンパク質構造評価法の開発
小形 公亮; 前田 朝登; 村松 邑香; 杉山 直幸; 石濱 泰
第34回クロマトグラフィー科学会議, 27 Oct. 2023
Ultrahigh throughput proteomics with high-speed and high-sensitivity LC/MS/MS system.