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Munakata, Ryosuke

Research Institute for Sustainable Assistant Professor

Munakata, Ryosuke
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    Last Updated :2023/09/22

    Basic Information

    Affiliated programs (koza)

    • Graduate School of Agriculture, 応用生命科学専攻 木質生命科学講座, 助教

    Professional Memberships

    • イソプレノイド研究会
    • 植物二次代謝フロンティア研究会
    • 植物化学研究会
    • 日本植物バイオテクノロジー学会
    • 日本植物生理学会
    • 日本農芸化学会

    Academic Degree

    • 修士(農学)(京都大学)
    • 博士(農学)(京都大学)

    Research History

    • From Mar. 2020, To Present
      京都大学 生存圏研究所 助教
    • From Apr. 2019, To Feb. 2020
      フランス・ロレーヌ大学 博士研究員
    • From Apr. 2017, To Mar. 2019
      独立行政法人日本学術振興会 海外特別研究員
    • From Apr. 2016, To Mar. 2017
      京都大学 生存圏研究所 博士研究員
    • From Apr. 2013, To Mar. 2016
      独立行政法人日本学術振興会 特別研究員 DC1

    ID,URL

    researchmap URL

    list
      Last Updated :2023/09/22

      Research

      Research Interests

      • 代謝工学
      • 植物分子生物学
      • 植物生化学

      Research Areas

      • Life sciences, Bioorganic chemistry
      • Life sciences, Applied biochemistry, Plant secondary (specialized) metabolism

      Papers

      • Inventory of ATP-binding cassette proteins in Lithospermum erythrorhizon as a model plant producing divergent secondary metabolites
        Hao Li; Hinako Matsuda; Ai Tsuboyama; Ryosuke Munakata; Akifumi Sugiyama; Kazufumi Yazaki
        DNA Research, 27 May 2022, Peer-reviewed
      • A new P450 involved in the furanocoumarin pathway underlies a recent case of convergent evolution
        Cloé Villard; Ryosuke Munakata; Sakihito Kitajima; Robin van Velzen; Eric M. Schranz; Romain Larbat; Alain Hehn
        New Phytologist, 12 May 2021
      • Parallel evolution of UbiA superfamily proteins into aromatic O-prenyltransferases in plants
        Ryosuke Munakata; Alexandre Olry; Tomoya Takemura; Kanade Tatsumi; Takuji Ichino; Cloé Villard; Joji Kageyama; Tetsuya Kurata; Masaru Nakayasu; Florence Jacob; Takao Koeduka; Hirobumi Yamamoto; Eiko Moriyoshi; Tetsuya Matsukawa; Jérémy Grosjean; Célia Krieger; Akifumi Sugiyama; Masaharu Mizutani; Frédéric Bourgaud; Alain Hehn; Kazufumi Yazaki
        Proceedings of the National Academy of Sciences, 27 Apr. 2021
      • Convergent evolution of the UbiA prenyltransferase family underlies the independent acquisition of furanocoumarins in plants.
        Ryosuke Munakata; Sakihito Kitajima; Andréïna Nuttens; Kanade Tatsumi; Tomoya Takemura; Takuji Ichino; Gianni Galati; Sonia Vautrin; Hélène Bergès; Jérémy Grosjean; Frédéric Bourgaud; Akifumi Sugiyama; Alain Hehn; Kazufumi Yazaki
        The New phytologist, Mar. 2020, Peer-reviewed
      • Isolation of Artemisia capillaris membrane-bound di-prenyltransferase for phenylpropanoids and redesign of artepillin C in yeast
        Ryosuke Munakata; Tomoya Takemura; Kanade Tatsumi; Eiko Moriyoshi; Koki Yanagihara; Akifumi Sugiyama; Hideyuki Suzuki; Hikaru Seki; Toshiya Muranaka; Noriaki Kawano; Kayo Yoshimatsu; Nobuo Kawahara; Takao Yamaura; Jérémy Grosjean; Frédéric Bourgaud; Alain Hehn; Kazufumi Yazaki
        Communications Biology, 01 Dec. 2019, Peer-reviewed
      • Defence mechanisms of Ficus: pyramiding strategies to cope with pests and pathogens
        Cloé Villard; Romain Larbat; Ryosuke Munakata; Alain Hehn
        Planta, Mar. 2019
      • Polyphenols from Plant Roots
        Ryosuke Munakata; Romain Larbat; Léonor Duriot; Alexandre Olry; Carole Gavira; Benoit Mignard; Alain Hehn; Frédéric Bourgaud
        Recent Advances in Polyphenol Research, 11 Jan. 2019
      • An Aromatic Farnesyltransferase Functions in Biosynthesis of the Anti-HIV Meroterpenoid Daurichromenic Acid.
        Haruna Saeki; Ryota Hara; Hironobu Takahashi; Miu Iijima; Ryosuke Munakata; Hiromichi Kenmoku; Kazuma Fuku; Ai Sekihara; Yoko Yasuno; Tetsuro Shinada; Daijiro Ueda; Tomoyuki Nishi; Tsutomu Sato; Yoshinori Asakawa; Fumiya Kurosaki; Kazufumi Yazaki; Futoshi Taura
        Plant physiology, Oct. 2018, Peer-reviewed
      • Comparative multi-omics analysis reveals diverse latex-based defense strategies against pests among latex-producing organs of the fig tree (Ficus carica)
        Sakihito Kitajima; Wataru Aoki; Daisuke Shibata; Daisuke Nakajima; Nozomu Sakurai; Kazufumi Yazaki; Ryosuke Munakata; Toki Taira; Masaru Kobayashi; Shunsuke Aburaya; Eric Hyrmeya Savadogo; Susumu Hibino; Haruna Yano
        Planta, 01 Jun. 2018, Peer-reviewed
      • Identification and characterization of daurichromenic acid synthase active in anti-HIV biosynthesis
        Miu Iijima; Ryosuke Munakata; Hironobu Takahashi; Hiromichi Kenmoku; Ryuichi Nakagawa; Takeshi Kodama; Yoshinori Asakawa; Ikuro Abe; Kazufumi Yazaki; Fumiya Kurosaki; Futoshi Taura
        Plant Physiology, 02 Aug. 2017, Peer-reviewed
      • Molecular evolution of parsnip (Pastinaca sativa) membrane-bound prenyltransferases for linear and/or angular furanocoumarin biosynthesis
        Ryosuke Munakata; Alexandre Olry; Fazeelat Karamat; Vincent Courdavault; Akifumi Sugiyama; Yoshiaki Date; Célia Krieger; Prisca Silie; Emilien Foureau; Nicolas Papon; Jérémy Grosjean; Kazufumi Yazaki; Frédéric Bourgaud; Alain Hehn
        New Phytologist, 01 Jul. 2016, Peer-reviewed
      • Molecular cloning and characterization of a geranyl diphosphate-specific aromatic prenyltransferase from lemon
        Ryosuke Munakata; Tsuyoshi Inoue; Takao Koseduka; Fazeelat Karamat; Alexandre Olry; Akifumi Sugiyama; Kojiro Takanashi; Audray Dugrand; Yann Froelicher; Ryo Tanaka; Yoshihiro Uto; Hitoshi Hori; Jun-Ichi Azuma; Alain Hehn; FréDéRic Bourgaud; Kazufumi Yazaki
        Plant Physiology, 01 Sep. 2014, Peer-reviewed
      • A coumarin-specific prenyltransferase catalyzes the crucial biosynthetic reaction for furanocoumarin formation in parsley
        Fazeelat Karamat; Alexandre Olry; Ryosuke Munakata; Takao Koeduka; Akifumi Sugiyama; Cedric Paris; Alain Hehn; Frédéric Bourgaud; Kazufumi Yazaki
        Plant Journal, Feb. 2014, Peer-reviewed
      • Characterization of coumarin-specific prenyltransferase activities in citrus limon peel
        Ryosuke Munakata; Tsuyoshi Inoue; Takao Koeduka; Kanako Sasaki; Yusuke Tsurumaru; Akifumi Sugiyama; Yoshihiro Uto; Hitoshi Hori; Jun-Ichi Azuma; Kazufumi Yazaki
        Bioscience, Biotechnology and Biochemistry, 2012, Peer-reviewed
      • Pulses without the Characteristic Distasteful Bitterness: Pea TILLING Lines Lacking the Major β-Amyrin Synthase in Soyasaponin Biosynthesis
        Ryosuke Munakata
        Plant and Cell Physiology, 01 Oct. 2021

      Misc.

      • 合成生物学を利用したメロテルペン類とアルカロイドの微生物生産
        棟方涼介; 矢崎一史
        植物の生長調節, Dec. 2022, Peer-reviewed
      • 植物の有用成分を微生物で作る – 合成生物学の活用
        棟方涼介
        植物バイオテクノロジーで目指すSDGs –変わる私たちの食と薬 –, 2022
      • 酵母をホストとしたアルテピリンC生合成リデザイン
        柳原康希; 棟方涼介; 棟方涼介; 竹村知陽; 市野琢爾; 關光; 鈴木秀幸; 杉山暁史; 矢崎一史
        日本植物細胞分子生物学会大会・シンポジウム講演要旨集, 2019
      • カワラヨモギのフェニルプロパン特異的プレニル化酵素は連続的プレニル化を触媒する
        棟方涼介; 棟方涼介; 竹村知陽; 杉山暁史; 鈴木秀幸; 關光; 村中俊哉; 河野徳昭; 吉松嘉代; 川原信夫; 山浦高夫; HEHN Alain; 矢崎一史
        日本植物生理学会年会(Web), 2018
      • カワラヨモギのフェニルプロパノイド特異的プレニル基転移酵素遺伝子の同定
        竹村知陽; 棟方涼介; 杉山暁史; 鈴木秀幸; 關光; 村中俊哉; 山浦高夫; 矢崎一史
        日本農芸化学会大会講演要旨集(Web), 2016
      • カワラヨモギにおけるフェニルプロパノイドのプレニル化酵素遺伝子の機能解析
        竹村知陽; 棟方涼介; 杉山暁史; 鈴木秀幸; 關光; 村中俊哉; 山浦高夫; 矢崎一史
        日本植物細胞分子生物学会大会・シンポジウム講演要旨集, 2016
      • イチゴ果実におけるモノテルペン生合成機構の解明
        橘頼之; 上岡颯人; 棟方涼介; 矢崎一史
        第30回イソプレノイド研究会, Sep. 2020
      • プロポリスの生理活性物質アルテピリンC合成系の酵母内再構築
        棟方涼介; 矢崎一史
        バイオサイエンスとインダストリー, 2020
      • 日本と真逆?なフレンチラボ Université de Lorraine
        棟方涼介
        実験医学, 2019
      • ホップ(Humulus lupulus L.)雌花のリナロール/ネロリドール合成酵素の機能解析
        影山丈士; 杉村哲; 棟方涼介; 百瀬眞幸; 梅基直行; 小原一朗; 三沢典彦; 新藤一敏; 矢崎一史
        第34回日本植物細胞分子生物学会, Sep. 2016
      • プレニル化酵素 ~「ひげ」修飾で植物ポリフェノールの高機能化~
        棟方涼介
        生物工学会誌, 2016
      • Enzymatic Characterization of Flavonoid Substrate Prenyl Transferase in Macaranga tanarius
        伊達慶明; 清水亮; 前田容子; 棟方涼介; 杉山暁史; 熊澤茂則; 福本修一; 矢崎一史
        第56回日本植物生理学会年会, Mar. 2015
      • Membrane-bound dimethylallyltransferase for umbelliferone catalyzes the first committed biosynthetic reaction in furanocoumarin formation
        1) Ryosuke Munakata, Fazeelat Karamat, Alexander Olry, Takao Koeduka, Masaharu Mizutani, Celia Krieger, Akifumi Sugiyama, Cedric Paris, Alain Hehn, Frédéric Bourgaud and Kazufumi Yazaki
        Polyphenol Communications 2014, 2014, Peer-reviewed
      • 植物の化学防御物質フラノクマリン類の生合成に関与するプレニル化酵素
        棟方涼介; 矢崎一史
        バイオサイエンスとインダストリー, 2014
      • ムラサキにおけるポリフェノールオキシダーゼLePPO1の発現特性とシコニン生産
        高野祐希; 山本恭子; 棟方涼介; 杉山暁史; 佐々木佳菜子; 小原一朗; 山本浩文; 矢崎一史
        第30回日本植物細胞分子生物学会 2012.8.3-2012.8.5, 2012
      • ミカン科におけるクマリン特異的プレニル基転移酵素の探索と機能解析
        棟方 涼介; 井上 剛史; 肥塚 崇男; 佐々木 佳菜子; 鶴丸 優介; 杉山 暁史; 宇都 義浩; 東 順一; 矢崎 一史
        第30回日本植物細胞分子生物学会, Aug. 2011
      • Studies on coumarin-specific prenyltransfrase genes in plants
        Munakata Ryosuke
        Sustainable humanosphere : bulletin of Research Institute for Sustainable Humanosphere Kyoto University, 15 Nov. 2016
      • Biochemical analysis of coumarin-specific prenyltransferase activities in lemon peel
        Munakata Ryosuke
        Sustainable humanosphere : bulletin of Research Institute for Sustainable Humanosphere Kyoto University, 31 Oct. 2013

      Presentations

      • Microbial production of plant prenylated polyphenols using synthetic biology
        Ryosuke MUNAKATA
        第39回 日本植物バイオテクノロジー学会, 13 Sep. 2022, Invited
      • 植物フェノール類プレニ化酵素の位置特異性を担う 触媒機構の解明に向けて
        棟方 涼介; 高橋 宏暢; 肥塚 崇男; Alain HEHN; 矢﨑 一史
        第30回イソプレノイド研究会, 25 Sep. 2020
      • Isolation of a di-prenyltransferase gene from Artemisia capillaris and redesign of bioactive prenylated phenylpropanes in yeast
        Ryosuke Munakata; Tomoya Takemura; Kanade Tatsumi; Eiko Moriyoshi; Koki Yanagihara; Akifumi Sugiyama; Hideyuki Suzuki; Hikaru Seki; Toshiya Muranaka; Noriaki Kawano; Kayo Yoshimatsu; Nobuo Kawahara; Takao Yamaura; Jérémy Grosjean; Frédéric Bourgaud; Alain Hehn; Kazufumi Yazaki
        Biomolecules: Research & Development, Markets and Acceptability, 24 Oct. 2019
      • Molecular characterization of a di-prenyltransferase from Artemisia capillaris and its application to the production of bioactive phenylpropanes
        Ryosuke Munakata
        MetaSPX, 03 May 2019
      • A phenylpropane-specific prenyltransferase catalyzes sequential prenylations in Artemisia capillaris
        Ryosuke Munakata; Tomoya Takemura; Akifumi Sugiyama; Hideyuki Suzuki; Hikaru Seki; Toshiya Muranaka; Noriaki Kawano; Kayo Yoshimatsu; Nobuo Kawahara; Takao Yamaura; Alain Hehn; Kazufumi Yazaki
        第59回 日本植物生理学会年会, 30 Mar. 2018
      • Convergent evolution of furanocoumarin biosynthesis for chemical defense in plants
        Ryosuke Munakata; Sakihito Kitajima; Toki Taira; Akifumi Sugiyama; Alain Hehn; Kazufumi Yazaki
        Bilateral Closure Symposium of GDRI Integrative Plant Biology Network Program, Lyon, October 23-25, 2017 "The developing plant in its environment", 22 Oct. 2017
      • Molecular evolution and function of plant-derived prenyltransferases for polyphenols
        Ryosuke Munakata; Tomoya Takemura; Sakihito Kitajima; Toki Taira; Akifumi Sugiyama; Kazufumi Yazaki
        11th national meeting of the SFBV, 07 Jul. 2016
      • 植物二次代謝におけるプレニル化フェノール類研究の進展とこれから
        棟方涼介
        第4回 植物二次代謝フロンティア研究会例会, 21 Mar. 2016, Invited
      • フラノクマリンのタイプ特異的なパースニップ由来プレニル化酵素遺伝子2 種の機能解析
        棟方 涼介; Olry Alexandre; Karamat Fazeelat; Courdavault Vincent; 杉山 暁史; 伊達 慶明; Krieger Célia; Prisca Silie; Papon Nicolas; Grosjean Jérémy; 矢崎 一史; Bourgaud Frédéric; Hehn Alain
        第57回日本植物生理学会年会, 19 Mar. 2016
      • Molecular characterization of membrane-bound prenyltransferases responsible for diversification of coumarin metabolism
        棟方 涼介
        第33回日本植物細胞分子生物学会, 11 Aug. 2015, Invited
      • Two membrane-bound prenyltransferases direct the synthesis of linear or angular furanocoumarins in parsnip
        Ryosuke MUNAKATA; Fazeelat KARAMAT; Alexandre OLRY; Courdavault VINCENT; Akifumi SUGIYAMA; Yoshiaki DATE; Celia KRIEGER; Nicolas PAPON; Emilien FOURREAU; Jeremy GROSJEAN; Kazufumi YAZAKI; Frederic BOURGAUD; Alain HEHN
        日本農芸化学会岡山大会, 28 Mar. 2015
      • A membrane-bound prenyltransferase catalyzes the first biosynthetic reaction toward furanocoumarin formation in parsley
        Ryosuke Munakata; Karamat Fazeelat; Alexandre Olry; Takao Koeduka; Akifumi Sugiyama; Cedric Paris; Alain Hehn; Frédéric Bourgaud; Kazufumi Yazaki
        KANSAI JSBBA 1st Student Forum, 31 Jan. 2015
      • Membrane-bound dimethylallyltransferase for umbelliferone catalyzes the first committed biosynthetic reaction in furanocoumarin formation
        Ryosuke Munakata; Karamat Fazeelat; Alexandre Olry; Takao Koeduka; Masaharu Mizutani; Célia Krieger; Akifumi Sugiyama; Cedric Paris; Alain Hehn; Frédéric Bourgaud; Kazufumi Yazaki
        The XXVIIth International Conference on Polyphenols & The 8th Tannin Conference, 03 Sep. 2014
      • cDNA Cloning and Characterization of Prenyltransfeases for Coumarins from Grapefruit
        R. Munakata; A. Olry; M. Mizutani; C. Krieger; F. Karamat; A. Hehn; A. Sugiyama; K. Yazaki; F. Bourgaud
        第55回日本植物生理学会年会, 18 Mar. 2014
      • クマリン類の化学構造多様性の鍵となるプレニル基転移酵素ファミリーの解明
        棟方 涼介; Karamat Fazeelat; Alexandre Olry; 肥塚 崇男; 井上 剛史; 杉山 暁史; 田中 涼; 宇都 義浩; 堀 均; 東 順一; Alain Hehn; rédéric Bourgaud; 矢崎 一史
        第23回イソプレノイド研究会例会, 14 Sep. 2013
      • レモンのクマリン基質プレニル基転移酵素cDNAの単離と機能解析
        棟方涼介; 井上剛史; 肥塚 崇男; 佐々木佳菜; 鶴丸優介; 杉山暁史; 宇都義浩; 東順一; 矢崎 一史
        第54回日本植物生理学会年会, 23 Mar. 2013
      • レモン 果皮における クマリン 基質 プレニルトランスフェーゼの 検出 とcDNA クローニング
        棟方 涼介; 井上 剛史; 肥塚 崇男; 佐々木 佳菜子; 鶴丸 優介; 杉山 暁史; 宇都 義浩; 東 順一; 矢崎 一史
        日本農芸化学会京都大会, 23 Mar. 2012
      • Studies on coumarin prenyltransferases involved in tolerance to pathogens and herbivours in lemon
        R. Munakata; T. Inoue; T. Koezuka; K. Sasaki; Y. Tsurumaru; A. Sugiyama; Y. Uto; H. Hori; J. Azuma; K. Yazaki
        International Symposium "Strategies of Plants against Global Environmental Change", 08 Dec. 2011
      • レモンのクマリン基質プレニルトランスフェラーゼの単離と機能解析
        井上剛史; 棟方涼介; 肥塚崇男; 佐々木佳菜; 鶴丸優介; 杉山暁史; 宇都義浩; 東順一; 矢崎一史
        第29回日本植物細胞分子生物学会, 07 Sep. 2011
      • 植物二次代謝産物の高機能化を担うUbiAプレニル化酵素 ~新規遺伝子探索から酵素・代謝工学にむけて~
        棟方涼介
        日本薬学会第142年会, 26 Mar. 2022, Invited
      • Spatial localization of biosynthesis and accumulation of plant allelochemical furanocoumarins
        Ryosuke Munakata
        日本農芸化学会京都大会, 18 Mar. 2022
      • Repeated evolution of furanocoumarin biosynthesis in plants
        Ryosuke Munakata
        IRN France-Japan Frontiers in Plant Biology, 02 Dec. 2021

      Awards

      • Jan. 2015
        KANSAI JSBBA 1st Student Forum, Most influential presentation award
      • Aug. 2015
        日本植物細胞分子生物学会, 2015年度日本植物細胞分子生物学会学生奨励賞

      External funds: Kakenhi

      • Elucidation of catalytic mechanisms underlying the regio-specificity of plant aromatic prenyltransferases
        Grant-in-Aid for Research Activity Start-up
        0601:Agricultural chemistry and related fields
        Kyoto University
        Ryosuke Munakata
        From 11 Sep. 2020, To 31 Mar. 2022, Project Closed
        プレニル化フェノール類;プレニル化酵素;位置特異性;触媒機構;3Dモデリング;植物二次(特化)代謝;プレニル化フェノール;フラノクマリン
      • Estimation of environment response function for genes driving BVOC emission phenology
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (IV)
        Ryukoku University
        永野 惇
        From 01 Apr. 2023, To 31 Mar. 2028, Granted
        BVOC;トランスクリプトーム;環境応答;イソプレン;モノテルペン
      • Support activities to promote plant-climate feedbacks
        Grant-in-Aid for Transformative Research Areas (A)
        Transformative Research Areas, Section (IV)
        Kyushu University
        佐竹 暁子
        From 01 Apr. 2023, To 31 Mar. 2028, Granted
        揮発性有機化合物;エアロゾル;植物フェノロジー;植物分子;気候変動

      External funds: others

      • Convergent evolution-based design of plant specialized metabolism
        さきがけ
        From 01 Dec. 2020, To 31 Mar. 2024
        棟方涼介
      list
        Last Updated :2023/09/22

        Education

        Teaching subject(s)

        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Plant Gene Expression2
          CB44, Year-long, Graduate School of Agriculture, 3
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Plant Gene Expression1
          CB43, Year-long, Graduate School of Agriculture, 3
        • From 01 Apr. 2023, To 31 Mar. 2024
          Experimental Course of Plant Gene Expression1
          CC43, Year-long, Graduate School of Agriculture, 6
        • From 01 Apr. 2023, To 31 Mar. 2024
          Experimental Course of Plant Gene Expression2
          CC44, Year-long, Graduate School of Agriculture, 6
        • From 01 Apr. 2022, To 31 Mar. 2023
          Experimental Course of Plant Gene Expression2
          CC44, Year-long, Graduate School of Agriculture, 6
        • From 01 Apr. 2022, To 31 Mar. 2023
          Experimental Course of Plant Gene Expression1
          CC43, Year-long, Graduate School of Agriculture, 6
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Plant Gene Expression1
          CB43, Year-long, Graduate School of Agriculture, 3
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Plant Gene Expression2
          CB44, Year-long, Graduate School of Agriculture, 3
        • From Apr. 2021, To Mar. 2022
          Experimental Course of Plant Gene Expression1
          Year-long, 農学研究科
        • From Apr. 2021, To Mar. 2022
          Experimental Course of Plant Gene Expression2
          Year-long, 農学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Plant Gene Expression1
          Year-long, 農学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Plant Gene Expression2
          Year-long, 農学研究科
        list
          Last Updated :2023/09/22

          Administration

          Faculty management (title, position)

          • From 01 Apr. 2022, To 31 Mar. 2024
            生存圏研究所教育学生委員会
          • From 01 Apr. 2022, To 31 Mar. 2024
            生存圏研究所共同利用・共同研究拠点委員会
          • From 01 Apr. 2020, To 31 Mar. 2022
            生存圏研究所教育学生委員会
          • From 01 Apr. 2020, To 31 Mar. 2022
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