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Endo, Hisashi

Institute for Chemical Research (ICR) Associate Professor

Endo, Hisashi
list
    Last Updated :2024/11/25

    Basic Information

    Affiliated programs (koza)

    • Graduate School of Science, 生物科学専攻 生体分子情報学講座, 准教授

    Professional Memberships

    • JAPANESE SOCIETY FOR BIOINFORMATICS
    • Association for the Sciences of Limnology and Oceanography
    • THE JAPANESE SOCIETY OF PHOTOSYNTHESIS RESEARCH
    • THE JAPANESE SOCIETY OF MICROBIAL ECOLOGY
    • THE OCEANOGRAPHIC SOCIETY OF JAPAN

    Academic Degree

    • Master of Environmental Science(Hokkaido University)
    • Ph.D., Environmental Science(Hokkaido University)

    Academic Resume (Undergraduate School/Majors)

    • Tokyo Gakugei University, Department of Education, 卒業

    High School

    • High School

      新潟県立新発田高等学校

    Research History

    • From Nov. 2022, To Present
      Kyoto University, Bioinformatics Center, Institute for Chemical Research, Associate Professor
    • From May 2017, To Oct. 2022
      Kyoto University, Bioinformatics Center, Institute for Chemical Research, Assistant Professor
    • From Apr. 2013, To Apr. 2017
      Hokkaido University, Faculty of Environmnetal Earth Science, Postdoctoral Researcher

    ID,URL

    Website(s) (URL(s))

    researchmap URL

    list
      Last Updated :2024/11/25

      Research

      Research Topics, Overview of the research

      • Research Topics

        Ecology and biogeography of marine phytoplankton and giant viruses

      • Overview of the research

        海洋微生物の生物地理分布、多様性、およびその環境応答に関する研究を行っています。特に、基礎生産者である植物プランクトンとそれに感染するウイルスとの相互作用に着目し、生物地理や多様性が形成されるメカニズムを、フィールド観測と分子生物学的手法により明らかにしたいと考えています。

      Research Interests

      • Microbial Ocanography
      • Bioinformatics
      • Biodiversity
      • Microbial Ecology

      Research Areas

      • Environmental science/Agricultural science, Environmental dynamics
      • Life sciences, Marine/Aquatic life sciences
      • Life sciences, Ecology and environmental science

      Papers

      • Taxon-specific contributions of microeukaryotes to biological carbon pump in the Oyashio region
        Qingwei Yang; Yanhui Yang; Jun Xia; Hideki Fukuda; Yusuke Okazaki; Toshi Nagata; Hiroyuki Ogata; Hisashi Endo
        ISME Communications, 04 Nov. 2024, Peer-reviewed, Corresponding author
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      • Gene transfer among viruses substantially contributes to gene gain of giant viruses.
        Junyi Wu; Lingjie Meng; Morgan Gaïa; Hiroyuki Hikida; Yusuke Okazaki; Hisashi Endo; Hiroyuki Ogata
        Molecular biology and evolution, 02 Aug. 2024, Peer-reviewed
      • Extracellular rRNA profiling reveals the sinking and cell lysis dynamics of marine microeukaryotes
        Hisashi Endo; Yuki Yamagishi; Thi Tuyen Nguyen; Hiroyuki Ogata
        01 Jun. 2024, Lead author, Corresponding author
      • Global distribution and diversity of marine Parmales
        Hiroki Ban; Hisashi Endo; Akira Kuwata; Hiroyuki Ogata
        Microbes and Environments, 09 Nov. 2023, Peer-reviewed
      • Corrigendum − Yoshida et al., 2018 (Estuarine, Coastal and Shelf Science (2018) 212 (80–94), (S0272771417310107), (10.1016/j.ecss.2018.06.018))
        Yoshida, K.; Endo, H.; Lawrenz, E.; Isada, T.; Hooker, S.B.; Pr{\'a}?il, O.; Suzuki, K.
        Estuarine, Coastal and Shelf Science, 2019
      • Predicting global distributions of eukaryotic plankton communities from satellite data
        Hiroto Kaneko; Hisashi Endo; Nicolas Henry; Cédric Berney; Frédéric Mahé; Julie Poulain; Karine Labadie; Odette Beluche; Roy El Hourany; Silvia G. Acinas; Marcel Babin; Peer Bork; Chris Bowler; Guy Cochrane; Colomban de Vargas; Gabriel Gorsky; Lionel Guidi; Nigel Grimsley; Pascal Hingamp; Daniele Iudicone; Olivier Jaillon; Stefanie Kandels; Eric Karsenti; Fabrice Not; Nicole Poulton; Stéphane Pesant; Christian Sardet; Sabrina Speich; Lars Stemmann; Matthew B. Sullivan; Shinichi Sunagawa; Samuel Chaffron; Patrick Wincker; Ryosuke Nakamura; Lee Karp-Boss; Emmanuel Boss; Chris Bowler; Colomban de Vargas; Kentaro Tomii; Hiroyuki Ogata
        ISME Communications, 22 Sep. 2023, Peer-reviewed
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      • Inter-comparison of marine microbiome sampling protocols
        Francisco Pascoal; Maria Paola Tomasino; Roberta Piredda; Grazia Marina Quero; Luís Torgo; Julie Poulain; Pierre E. Galand; Jed Fuhrman; Alex Mitchell; Tinkara Tinta; Timotej Turk Dermastia; Antonio Fernandez-Guerra; ALESSANDRO VEZZI; Ramiro Logares; Francesca Malfatti; Hisashi Endo; Anna Dąbrowska (Kubiszyn); Fabio De Pascale; Pablo Sánchez; Nicolas Henry; Bruno Fosso; Bryan Wilson; Stepan Toshchakov; Gregory Kevin Ferrant; Ivo Grigorov; Fabio Rocha Jimenez Vieira; Rodrigo Costa; Stéphane PESANT; C. Magalhães
        ISME Communications, 19 Aug. 2023, Peer-reviewed
      • Ocean-wide comparisons of mesopelagic planktonic community structures
        Janaina Rigonato; Marko Budinich; Alejandro A. Murillo; Manoela C. Brandão; Juan J. Pierella Karlusich; Yawouvi Dodji Soviadan; Ann C. Gregory; Hisashi Endo; Florian Kokoszka; Dean Vik; Nicolas Henry; Paul Frémont; Karine Labadie; Ahmed A. Zayed; Céline Dimier; Marc Picheral; Sarah Searson; Julie Poulain; Stefanie Kandels; Stéphane Pesant; Eric Karsenti; Silvia G. Acinas; Emmanuel Boss; Guy Cochrane; Colomban de Vargas; Gabriel Gorsky; Nigel Grimsley; Lionel Guidi; Pascal Hingamp; Lee Karp-Boss; Fabrice Not; Jeroen Raes; Christian Sardet; Sabrina Speich; Peer Bork; Chris Bowler; Colomban de Vargas; Damien Eveillard; Marion Gehlen; Daniele Iudicone; Fabien Lombard; Hiroyuki Ogata; Lars Stemmann; Matthew B. Sullivan; Shinichi Sunagawa; Patrick Wincker; Samuel Chaffron; Olivier Jaillon
        ISME Communications, 18 Aug. 2023, Peer-reviewed
      • A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample.
        Okazaki Y; Nguyen TT; Nishihara A; Endo H; Ogata H; Nakano SI; Tamaki H
        Microbes and environments, 01 Jan. 2023, Peer-reviewed
      • Genomic adaptation of giant viruses in polar oceans
        Lingjie Meng; Tom O. Delmont; Morgan Gaïa; Eric Pelletier; Antonio Fernàndez-Guerra; Samuel Chaffron; Russell Y. Neches; Junyi Wu; Hiroto Kaneko; Hisashi Endo; Hiroyuki Ogata
        Nature Communications, 12 Oct. 2023, Peer-reviewed
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      • Community composition and photophysiology of phytoplankton assemblages in coastal Oyashio waters of the western North Pacific during early spring (vol 212, pg 81, 2018)
        Kazuhiro Yoshida; Hisashi Endo; Evelyn Lawrenz; Tomonori Isada; Stanford B. Hooker; Ondrej Prasil; Koji Suzuki
        ESTUARINE COASTAL AND SHELF SCIENCE, Nov. 2019, Peer-reviewed
      • Haptophyte communities along the Kuroshio current reveal their geographical sources and ecological traits
        Hisashi Endo; Yu Umezawa; Shigenobu Takeda; Koji Suzuki
        Molecular Ecology, 30 Oct. 2022, Peer-reviewed, Lead author, Corresponding author
      • Global observation of plankton communities from space
        Hiroto Kaneko; Hisashi Endo; Nicolas Henry; Cédric Berney; Frédéric Mahé; Julie Poulain; Karine Labadie; odette beluche; Roy El Hourany; Samuel Chaffron; Patrick Wincker; Ryosuke Nakamura; Lee Karp-Boss; Emmanuel Boss; Chris Bowler; Colomban de Vargas; Kentaro Tomii; Hiroyuki Ogata; Tara Oceans Coordinators
        26 Sep. 2022
      • Genome analysis of Parmales, the sister group of diatoms, reveals the evolutionary specialization of diatoms from phago-mixotrophs to photoautotrophs
        Hiroki Ban; Shinya Sato; Shinya Yoshikawa; Kazumasa Yamada; Yoji Nakamura; Mutsuo Ichinomiya; Naoki Sato; Romain Blanc-Mathieu; Hisashi Endo; Akira Kuwata; Hiroyuki Ogata
        Communications Biology, 07 Jul. 2023, Peer-reviewed
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      • Disentangling the Ecological Processes Shaping the Latitudinal Pattern of Phytoplankton Communities in the Pacific Ocean
        Zhimeng Xu; Shunyan Cheung; Hisashi Endo; Xiaomin Xia; Wenxue Wu; Bingzhang Chen; Ngai Hei Ernest Ho; Koji Suzuki; Meng Li; Hongbin Liu
        mSystems, 04 Jan. 2022, Peer-reviewed
      • Year-round dynamics of amplicon sequence variant communities differ among eukaryotes, Imitervirales, and prokaryotes in a coastal ecosystem
        Florian Prodinger; Hisashi Endo; Yoshihito Takano; Yanze Li; Kento Tominaga; Tatsuhiro Isozaki; Romain Blanc-Mathieu; Yasuhiro Gotoh; Tetsuya Hayashi; Etsunori Taniguchi; Keizo Nagasaki; Takashi Yoshida; Hiroyuki Ogata
        FEMS Microbiology Ecology, 28 Dec. 2021, Peer-reviewed
      • Assimilation and oxidation of urea‐derived nitrogen in the summer Arctic Ocean
        Takuhei Shiozaki; Fuminori Hashihama; Hisashi Endo; Minoru Ijichi; Noriko Takeda; Akiko Makabe; Amane Fujiwara; Shigeto Nishino; Naomi Harada
        Limnology and Oceanography, Dec. 2021, Peer-reviewed
      • RNA Sequencing of Medusavirus Suggests Remodeling of the Host Nuclear Environment at an Early Infection Stage
        Ruixuan Zhang; Hisashi Endo; Masaharu Takemura; Hiroyuki Ogata
        Microbiology Spectrum, 29 Sep. 2021, Peer-reviewed
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      • Tight association between microbial eukaryote and giant virus communities in the Arctic Ocean
        Jun Xia; Sohiko Kameyama; Florian Prodinger; Takashi Yoshida; Kyoung-Ho Cho; Jinyoung Jung; Sung-Ho Kang; Eun-Jin Yang; Hiroyuki Ogata; Hisashi Endo
        Limnology and Oceanography, 16 Apr. 2022, Peer-reviewed, Corresponding author
      • Discovery of Viral Myosin Genes With Complex Evolutionary History Within Plankton
        Soichiro Kijima; Tom O. Delmont; Urara Miyazaki; Morgan Gaia; Hisashi Endo; Hiroyuki Ogata
        Frontiers in Microbiology, 07 Jun. 2021, Peer-reviewed
      • Gamma4: a genetically versatile Gammaproteobacterial nifH phylotype that is widely distributed in the North Pacific Ocean
        Shunyan Cheung; Jonathan P. Zehr; Xiaomin Xia; Chihiro Tsurumoto; Hisashi Endo; Shin‐ichiro Nakaoka; Wingkwan Mak; Koji Suzuki; Hongbin Liu
        Environmental Microbiology, May 2021, Peer-reviewed
      • Quantitative Assessment of Nucleocytoplasmic Large DNA Virus and Host Interactions Predicted by Co-occurrence Analyses
        Lingjie Meng; Hisashi Endo; Romain Blanc-Mathieu; Samuel Chaffron; Rodrigo Hernández-Velázquez; Hiroto Kaneko; Hiroyuki Ogata; Hideyuki Tamaki
        mSphere, Apr. 2021, Peer-reviewed
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      • Insights into biotic and abiotic modulation of ocean mesopelagic communities
        Janaina Rigonato; Marko Budinich; Alej; ro A. Murillo; Manoela C. Br; {\~{a } }o; Juan J. Pierella Karlusich; Yawouvi Dodji Soviadan; Ann C. Gregory; Hisashi Endo; Florian Kokoszka; Dean Vik; Nicolas Henry; Paul Fr{\'{e } }mont; Karine Labadie; Ahmed A. Zayed; C{\'{e } }line Dimier; Marc Picheral; Sarah Searson; Julie Poulain; Stefanie K; els; St{\'{e } }phane Pesant; Eric Karsenti; Peer Bork; Chris Bowler; Samuel Chaffron; Colomban de Vargas; Damien Eveillard; Marion Gehlen; Daniele Iudicone; Fabien Lombard; Hiroyuki Ogata; Lars Stemmann; Matthew B. Sullivan; Shinichi Sunagawa; Patrick Wincker; Olivier Jaillon
        27 Feb. 2021
      • Draft Genome Sequence of Medusavirus Stheno, Isolated from the Tatakai River of Uji, Japan
        Koki Yoshida; Ruixuan Zhang; Kimberly G. Garcia; Hisashi Endo; Yasuhiro Gotoh; Tetsuya Hayashi; Masaharu Takemura; Hiroyuki Ogata; Jelle Matthijnssens
        Microbiology Resource Announcements, 07 Jan. 2021, Peer-reviewed
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      • The complete genomic sequence of the novel myovirus RP13 infecting Ralstonia solanacearum, the causative agent of bacterial wilt
        Takeru Kawasaki; Hisashi Endo; Hiroyuki Ogata; Orawan Chatchawankanphanich; Takashi Yamada
        Archives of Virology, 02 Jan. 2021, Peer-reviewed, Lead author
      • Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean
        Hiroto Kaneko; Romain Blanc-Mathieu; Hisashi Endo; Samuel Chaffron; Tom O. Delmont; Morgan Gaia; Nicolas Henry; Rodrigo Hernández-Velázquez; Canh Hao Nguyen; Hiroshi Mamitsuka; Patrick Forterre; Olivier Jaillon; Colomban de Vargas; Matthew B. Sullivan; Curtis A. Suttle; Lionel Guidi; Hiroyuki Ogata
        iScience, Jan. 2021, Peer-reviewed
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      • Ecological Structuring of Temperate Bacteriophages in the Inflammatory Bowel Disease-Affected Gut
        Hiroki Nishiyama; Hisashi Endo; Romain Blanc-Mathieu; Hiroyuki Ogata
        Microorganisms, Oct. 2020, Peer-reviewed
      • Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions
        Hisashi Endo; Romain Blanc-Mathieu; Yanze Li; Guillem Salazar; Nicolas Henry; Karine Labadie; Colomban de Vargas; Matthew B. Sullivan; Chris Bowler; Patrick Wincker; Lee Karp-Boss; Shinichi Sunagawa; Hiroyuki Ogata
        Nature Ecology & Evolution, 07 Sep. 2020, Peer-reviewed, Lead author
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      • Physical forcing controls the basin‐scale occurrence of nitrogen‐fixing organisms in the North Pacific Ocean
        Shunyan Cheung; Risa Nitanai; Chihiro Tsurumoto; Hisashi Endo; Shin‐ichiro Nakaoka; Wee Cheah; Jaime Färber Lorda; Xiaomin Xia; Hongbin Liu; Koji Suzuki
        Global Biogeochemical Cycles, 02 Sep. 2020, Peer-reviewed
      • An Optimized Metabarcoding Method for Mimiviridae
        Florian Prodinger; Hisashi Endo; Yasuhiro Gotoh; Yanze Li; Daichi Morimoto; Kimiho Omae; Kento Tominaga; Romain Blanc-Mathieu; Yoshihito Takano; Tetsuya Hayashi; Keizo Nagasaki; Takashi Yoshida; Hiroyuki Ogata
        Microorganisms, Apr. 2020, Peer-reviewed
      • KofamKOALA: KEGG ortholog assignment based on profile HMM and adaptive score threshold
        Takuya Aramaki; Romain Blanc-Mathieu; Hisashi Endo; Koichi Ohkubo; Minoru Kanehisa; Susumu Goto; Hiroyuki Ogata; Alfonso Valencia
        Bioinformatics, Nov. 2019, Peer-reviewed
      • Viruses of the eukaryotic plankton are predicted to increase carbon export efficiency in the global sunlit ocean
        Romain Blanc-Mathieu; Hiroto Kaneko; Hisashi Endo; Samuel Chaffron; Rodrigo Hern{\'{a; ndez-Vel{\'{a } }zquez; Canh Hao Nguyen; Hiroshi Mamitsuka; Nicolas Henry; Colomban de Vargas; Matthew B. Sullivan; Curtis A. Suttle; Lionel Guidi; Hiroyuki Ogata
        Jul. 2019, Peer-reviewed
      • Spatial Variations in Community Structure of Haptophytes Across the Kuroshio Front in the Tokara Strait
        Hisashi Endo; Koji Suzuki
        Kuroshio Current, May 2019, Peer-reviewed, Lead author, Corresponding author
      • Increased temperature benefits growth and photosynthetic performance of the sea ice diatom Nitzschia cf. neglecta (Bacillariophyceae) isolated from saroma lagoon, Hokkaido, Japan
        Dong Yan; Hisashi Endo; Koji Suzuki
        Journal of Phycology, Feb. 2019, Peer-reviewed
      • Latitudinal and Vertical Variation of Synechococcus Assemblage Composition Along 170° W Transect From the South Pacific to the Arctic Ocean
        Xiaomin Xia; Shunyuan Cheung; Hisashi Endo; Koji Suzuki; Hongbin Liu
        Microbial Ecology, 04 Jan. 2019, Peer-reviewed
      • Global Trends in Marine Plankton Diversity across Kingdoms of Life
        Ibarbalz, F.M.; Henry, N.; Brandão, M.C.; Martini, S.; Busseni, G.; Byrne, H.; Coelho, L.P.; Endo, H.; Gasol, J.M.; Gregory, A.C.; Mahé, F.; Rigonato, J.; Royo-Llonch, M.; Salazar, G.; Sanz-Sáez, I.; Scalco, E.; Soviadan, D.; Zayed, A.A.; Zingone, A.; Labadie, K.; Ferland, J.; Marec, C.; Kandels, S.; Picheral, M.; Dimier, C.; Poulain, J.; Pisarev, S.; Carmichael, M.; Pesant, S.; Acinas, S.G.; Babin, M.; Bork, P.; Boss, E.; Bowler, C.; Cochrane, G.; de Vargas, C.; Follows, M.; Gorsky, G.; Grimsley, N.; Guidi, L.; Hingamp, P.; Iudicone, D.; Jaillon, O.; Karp-Boss, L.; Karsenti, E.; Not, F.; Ogata, H.; Poulton, N.; Raes, J.; Sardet, C.; Speich, S.; Stemmann, L.; Sullivan, M.B.; Sunagawa, S.; Wincker, P.; Pelletier, E.; Bopp, L.; Lombard, F.; Zinger, L.
        Cell, 2019, Peer-reviewed
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      • The Earth Is Small for “Leviathans”: Long Distance Dispersal of Giant Viruses across Aquatic Environments
        Yanze Li; Hisashi Endo; Yasuhiro Gotoh; Hiroyasu Watai; Nana Ogawa; Romain Blanc-Mathieu; Takashi Yoshida; Hiroyuki Ogata
        Microbes and Environments, 2019, Peer-reviewed
      • Degenerate PCR Primers to Reveal the Diversity of Giant Viruses in Coastal Waters
        Yanze Li; Pascal Hingamp; Hiroyasu Watai; Hisashi Endo; Takashi Yoshida; Hiroyuki Ogata
        Viruses, Sep. 2018, Peer-reviewed
      • Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean
        Hisashi Endo; Hiroyuki Ogata; Koji Suzuki
        Scientific Reports, Jul. 2018, Peer-reviewed, Lead author, Corresponding author
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      • Community composition and photophysiology of phytoplankton assemblages in coastal Oyashio waters of the western North Pacific during early spring
        Kazuhiro Yoshida; Hisashi Endo; Evelyn Lawrenz; Tomonori Isada; Stanford B. Hooker; Ondřej Prášil; Koji Suzuki
        Estuarine, Coastal and Shelf Science, Jun. 2018, Peer-reviewed
      • Correction to: Phytoplankton community responses to iron and CO2 enrichment in different biogeochemical regions of the Southern Ocean
        Hisashi Endo; Hiroshi Hattori; Tsubasa Mishima; Gen Hashida; Hiroshi Sasaki; Jun Nishioka; Koji Suzuki
        Polar Biology, Feb. 2018, Peer-reviewed
      • Phytoplankton community responses to iron and CO2 enrichment in different biogeochemical regions of the Southern Ocean
        Hisashi Endo; Hiroshi Hattori; Tsubasa Mishima; Gen Hashida; Hiroshi Sasaki; Jun Nishioka; Koji Suzuki
        Polar Biology, May 2017, Peer-reviewed, Lead author, Corresponding author
      • Response of Spring Diatoms to CO2 Availability in the Western North Pacific as Determined by Next-Generation Sequencing
        Hisashi Endo; Koji Sugie; Takeshi Yoshimura; Koji Suzuki; Amanda M Cockshutt
        PLOS ONE, Apr. 2016, Peer-reviewed, Lead author, Corresponding author
      • Effects of CO2 and iron availability on rbcL gene expression in Bering Sea diatoms
        H. Endo; K. Sugie; T. Yoshimura; K. Suzuki
        Biogeosciences, Apr. 2015, Peer-reviewed, Lead author, Corresponding author
      • Organic matter production response to CO 2 increase in open subarctic plankton communities: Comparison of six microcosm experiments under iron-limited and -enriched bloom conditions
        Takeshi Yoshimura; Koji Sugie; Hisashi Endo; Koji Suzuki; Jun Nishioka; Tsuneo Ono
        Deep Sea Research Part I: Oceanographic Research Papers, 2014, Peer-reviewed
      • Effects of CO2 and iron availability on rbcL gene expression in Bering Sea diatoms
        H. Endo; K. Sugie; T. Yoshimura; K. Suzuki
        Biogeosciences Discussions, 2014
      • Synergistic effects of pCO2 and iron availability on nutrient consumption ratio of the Bering Sea phytoplankton community
        K. Sugie; H. Endo; K. Suzuki; J. Nishioka; H. Kiyosawa; T. Yoshimura
        Biogeosciences, 07 Oct. 2013, Peer-reviewed
      • Synergistic effects of pCO2 and iron availability on nutrient consumption ratio of the Bering Sea phytoplankton community
        K. Sugie; H. Endo; K. Suzuki; J. Nishioka; H. Kiyosawa; T. Yoshimura
        Biogeosciences Discussions, 06 Mar. 2013
      • Synergistic effects of pCO(2) and iron availability on nutrient consumption ratio of the Bering Sea phytoplankton community
        K. Sugie; H. Endo; K. Suzuki; J. Nishioka; H. Kiyosawa; T. Yoshimura
        BIOGEOSCIENCES, 2013, Peer-reviewed
      • Effects of CO2 and iron availability on phytoplankton and eubacterial community compositions in the northwest subarctic Pacific
        H. Endo; T. Yoshimura; T. Kataoka; K. Suzuki
        Journal of Experimental Marine Biology and Ecology, Jan. 2013, Peer-reviewed, Lead author, Corresponding author

      Misc.

      • 渦鞭毛Heterocapsa circularisquamaに感染するウイルスHcDNAVの単細胞トランスクリプトーム解析
        高野義人; 櫻井哲也; 池田彩乃; 遠藤寿; 外丸裕司; 緒方博之; 長崎慶三
        藻類, 2022
      • 渦鞭毛藻ウイルスのDNAポリメラーゼ活性中心は生物界の例外的存在か?
        池田彩乃; 高野義人; 遠藤寿; 緒方博之; 櫻井哲也; 加藤伸一郎; 大西浩平; 森澤啓子; 樋口琢磨; 外丸裕司; 高橋迪子; 長崎慶三
        藻類, 2020
      • 渦鞭毛藻感染性大型ウイルスHcDNAVのゲノム解析-1.ドラフト配列の特徴
        長崎慶三; 遠藤寿; 高野義人; 外丸裕司; 櫻井哲也; 池田彩乃; 大西浩平; 加藤伸一郎; 緒方博之
        藻類, 2019
      • 渦鞭毛藻に感染する巨大dsDNAウイルスの遺伝子解析
        長崎慶三; 遠藤寿; 高野義人; 外丸裕司; 櫻井哲也; 池田彩乃; 大西浩平; 加藤伸一郎; 緒方博之
        日本水産学会大会講演要旨集, 2019
      • 二酸化炭素分圧の変化が春季親潮域における珪藻rbcL遺伝子の発現と系統組成に与える影響
        遠藤寿; 遠藤寿; 鈴木光次; 鈴木光次; 杉江恒二; 杉江恒二; 芳村毅
        日本海洋学会大会講演要旨集, 2015
      • rbcL遺伝子からみた春季親潮域の珪藻類に対するCO2の効果
        遠藤寿; 鈴木光次; 杉江恒二; 杉江恒二; 芳村毅
        日本海洋学会大会講演要旨集, 2013

      Presentations

      • 溶存態RNAからプランクトンの死滅を探る
        遠藤 寿
        Ocean DNA Tech 2024, 06 Nov. 2024, Invited
      • ウイルス感染に起因するHeterosigma akashiwo由来の溶存RNAの網羅的解析
        菊矢 咲季; 長崎 慶三; 森本 大地; 緒方 博之; 遠藤 寿
        29 Oct. 2024
      • 細胞外rRNAを指標とした海洋プランクトン死滅溶解の網羅的推定
        遠藤 寿; 緒方 博之
        日本微生物生態学会第37回広島大会, 29 Oct. 2024
      • 溶存圏の遺伝情報が拓く新規プランクトン動態解析
        遠藤 寿
        2024 年度 ACT-X「環境とバイオテクノロジー」分科会(生理・生態分野), 29 Jul. 2024, Invited
      • Horizontal and vertical profiles of microeukaryotic communities in the eastern Indian Ocean using quantitative metabarcoding
        遠藤 寿; Wenwen Liu; 緒方 博之
        日本海洋学会秋季大会シンポジウム「BioGeoSCAPES-Japanの始動」, 28 Sep. 2023
      • 溶存態rRNAを指標としたプランクトン死滅溶解の推定
        遠藤 寿; 緒方 博之
        日本海洋学会秋季大会, 25 Sep. 2023
      • 分子生物学手法を用いた海洋生物地球化学循環の研究
        遠藤 寿
        第43回石橋雅義先生記念講演会, 22 Apr. 2023, Invited
      • 海洋植物プランクトンの共生的相互作用が増殖動態に与える影響
        遠藤 寿; 片岡 剛文; 緒方 博之
        日本微生物生態学会 第35回大会, 02 Nov. 2022
      • Temperature-dependent distributions of giant viruses infecting Micromonas
        Demory D; Endo H; Ogata H
        Luncheon Seminar at the Department of Biological Sciences, the University of Bergen, 16 Jun. 2022
      • Spatial variation of haptophyte assemblages along the Kuroshio Current
        Endo H; Umezawa Y; Takeda S; Suzuki K
        JpGU 2022, 23 May 2022
      • 海洋植物プランクトンの生物地理学的研究
        遠藤 寿
        第121回化学研究所研究発表会, 10 Dec. 2021
      • 海洋巨大ウイルスの生物地理が明かす真核生物との相互作用と生態学的機能
        遠藤 寿
        第121回化学研究所研究発表会, 10 Dec. 2021
      • 分子手法を用いた海洋プランクトン生態系の評価
        遠藤 寿
        ベントス・プランクトン合同大会2021シンポジウム〜次世代プランクトン研究を開拓する新技術・方法論〜, 20 Sep. 2021
      • Pole-to-pole biogeography of marine giant viruses and their role in biogeochemical cycles
        Hisashi Endo; Romain Blanc-Mathieu; Hiroyuki Ogata
        10th Aquatic Virus Workshop (AVW10), 30 Jun. 2021
      • 海洋巨大ウイルスの地理分布と物質循環における役割
        遠藤 寿; 緒方 博之
        北海道大学低温科学研究所 令和2年度共同利用研究集会「寒冷圏大気—海洋間の生物地球化学的相互作用に関する研究集会」, 29 Mar. 2021
      • Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions
        Hisashi Endo
        ISME Virtual Microbial Ecology Summit, 13 Nov. 2020, Invited
      • Global biogeography of giant viruses highlights their interplay with eukaryotic community
        Endo H; Li Y; Blanc-Mathieu R; Ogata H
        日本海洋学会2019年秋季大会, 26 Sep. 2019
      • Biogeography and diversity of phytoplankton and giant viruses in the ocean
        Hisashi Endo
        中国海洋大学の大学生に向けた講義, 16 Jul. 2019, Invited
      • メタゲノミクスを用いた大規模海洋調査
        遠藤 寿
        キンカ京都化学者クラブ, 11 May 2019, Invited
      • 大規模観測とメタゲノム解析による海洋微生物の多様性研究
        遠藤 寿
        メタオミクスワークショップ in 京都 2019, 11 Mar. 2019, Invited
      • Global distribution of nucleocytoplasmic large DNA viruses in the Ocean
        Endo H; Li Y; Blanc-Mathieu R; Ogata H
        ASLO 2019 Aquatic Sciences Meeting, 25 Feb. 2019
      • Biogeography of giant viruses in Arctic
        Hisashi Endo; Romain Blanc-Mathieu; Hiroto Kaneko; Hiroyuki Ogata
        Tara Oceans Polar Circle meeting, 09 Jan. 2018
      • Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean
        Hisashi Endo
        Bioinformatics Seminar Series, Bioinformatics Center, Kyoto University, 22 Dec. 2016, Invited
      • 西部北太平洋における珪藻類とハプト藻類の群集構造，多様性，およびその制御要因に関する研究
        遠藤寿; 鈴木光次
        日本海洋学会春季大会, Mar. 2016
      • Effects of increased pCO2 and iron availability on phytoplankton assemblages in the Southern Ocean
        Endo H; Hattori H; Hashida G; Nishioka J; Sasaki H; Suzuki K
        The Sixth Symposium on Polar Scienc, Nov. 2015
      • Taxon-specific responses of diatom assemblages to changing CO2 availability in Oyashio waters of the western North Pacific during spring
        Endo H; Sugie K; Yoshimura T; Suzuki K
        Molecular Life of Diatoms 2015, Jul. 2015
      • 二酸化炭素分圧の変化が春季親潮域における珪藻rbcL遺伝子の発現と系統組成に与える影響
        遠藤寿; 鈴木光次; 杉江恒二; 芳村毅
        日本海洋学会春季大会, Mar. 2015
      • Ion PGMアンプリコンシークエンシングを用いた海洋植物プランクトン群集の多様性解析
        遠藤寿; 杉江恒二; 神村章子; 鈴木光次
        NGS現場の会第三回研究会, Sep. 2013
      • rbcL遺伝子からみた春季親潮域の珪藻類に対するCO2の効果
        遠藤寿; 鈴木光次; 杉江恒二; 芳村毅
        日本海洋学会春季大会, Mar. 2013
      • Impacts of ocean acidification on phytoplankton community composition and rbcL gene expression of diatoms in the Bering Sea
        Endo H
        The 4th Hokkaido University Sustainability Research Poster Contest, Nov. 2012
      • Impacts of ocean acidification and iron enrichment on phytoplankton assemblages in the Southern Ocean
        Endo H; Hattori H; Hashida G; Nishioka J; Iida T; Motokawa S; Sasaki H; Suzuki K
        The Third Symposium on Polar Science, Nov. 2012
      • Responses of phytoplankton assemblages to changes in pCO2 level during the spring bloom in the Oyashio region
        Endo H; Yoshimura T; Sugie K; Suzuki K
        2012 ASLO Aquatic Sciences Meeting, Jul. 2012
      • Impacts of ocean acidification and iron enrichment on photosynthetic ability of diatoms in the Bering Sea as estimated from their rbcL gene expression
        Endo H
        The 3rd Hokkaido University Sustainability Research Poster Contest, Sapporo, Nov. 2011
      • Impacts of ocean acidification and iron enrichment on photosynthetic ability of diatoms in the Bering Sea as estimated from their rbcL gene expression
        Endo H; Sugie K; Yoshimura T; Suzuki K
        The Second Symposium on Polar Science, Nov. 2011
      • ベーリング海における珪藻類の光合成炭素固定活性に対する鉄およびCO2の効果：rbcL遺伝子発現による評価
        遠藤寿; 鈴木光次; 杉江恒二; 芳村毅
        日本海洋学会春季大会, Mar. 2011
      • Effects of increased pCO2 on the community compositions of phytoplankton and eubacteria in the NW subarctic Pacific
        Endo H; Yoshimura T; Kataoka T; Suzuki K
        Pre-Workshop Event of IPCC Workshop on "Impact of Ocean Acidification on Marine Biology and Ecosystems", Jan. 2011
      • Effects of increased pCO2 on phytoplankton community compositions in the NW subarctic Pacific and Bering Sea in summer
        Endo H; Yoshimura T; Sugie K; Suzuki K
        The 2nd Hokkaido University Sustainability Poster Contest, Oct. 2010
      • Effects of increased pCO2 and iron enrichment on phytoplankton community compositions in the NW subarctic Pacific and Bering Sea
        Endo H; Sugie K; Yoshimura T; Suzuki K
        The 7th International Symposium on Inorganic Carbon Utilization by Aquatic Photosynthetic Organisms (CCM7), Aug. 2010
      • CO2濃度と鉄供給の増加がベーリング海の微生物群集に及ぼす影響の評価
        遠藤寿; 鈴木光次; 杉江恒二; 芳村毅
        日本海洋学会春季大会, Mar. 2010
      • 海水中のpHおよび鉄が西部北太平洋の微生物群集に及ぼす影響の評価
        遠藤寿; 鈴木光次; 西岡純; 芳村毅
        日本海洋学会春季大会, Apr. 2009
      • 遺伝学的情報を通して探る海洋植物プランクトン・ウイルス生態系
        遠藤寿
        海洋生物シンポジウム2022, 19 Mar. 2022, Invited

      Books and Other Publications

      • 生きものは不思議 : 最前線に立つ研究者15人の白熱!講義
        遠藤 寿; 他14名, Contributor
        河出書房新社, Feb. 2023
        Find Kyoto University's collection of books :
      • メタゲノミクスを用いた大規模海洋調査
        遠藤寿, Single work
        海洋化学研究所, 2019
      • 海洋プランクトンに対する海洋酸性化の影響（特集 海洋酸性化）
        佐々木洋; 遠藤寿, Joint work
        生物研究社, 2013, Not refereed
      • pCO2と鉄濃度の違いが夏季ベーリング海の植物プランクトン群集におけるSiとNの利用比に与える影響
        杉江恒二; 遠藤 寿; 鈴木光次; 芳村毅, Joint work
        海洋出版株式会社, 2011, Not refereed

      Awards

      • 01 Apr. 2023
        公益財団法人海洋化学研究所, 第7回海洋化学奨励賞（40歳未満）
        分子生物学手法を用いた海洋生物地球化学循環の研究, Publisher
        遠藤 寿

      Media Coverage

      • 多様性 生物の役割分担
        読売新聞朝刊, 30 Mar. 2023, Paper
      • 助け合う微生物 謎解き
        読売新聞, 18 Feb. 2023, Paper
      • The giant viruses regulating marine phytoplankton
        株式会社ヤクルト本社広報室, HEALTHIST, 知られざるウイルス, May 2022, Paper
      • 地球環境問題に挑む若手研究者たちがフィル・キャンベルから得たヒント
        Nature ダイジェスト, Vol. 18 No. 8 doi: 10.1038/ndigest.2021.210832, Aug. 2021, Paper
      • 異常気象の新たなリスク 世界はウイルスでできている
        日本経済新聞朝刊, 15 Nov. 2020, Paper

      External funds: Kakenhi

      • Experimental investigation of the effects of phytoplankton diversity on ecosystem functioning in the ocean
        Grant-in-Aid for Early-Career Scientists
        Basic Section 40030:Aquatic bioproduction science-related
        Kyoto University
        Hisashi Endo
        From 01 Apr. 2019, To 31 Mar. 2023, Project Closed
        海洋生態;植物プランクトン;生物多様性;共起ネットワーク;生態系機能
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-19K15895/
      • Integrative understanding of marine nitrogen fixation based on global observations from tropics to polar regions.
        Grant-in-Aid for Scientific Research (B)
        Basic Section 63010:Environmental dynamic analysis-related
        The University of Tokyo
        Takuhei Shiozaki
        From 01 Apr. 2019, To 31 Mar. 2022, Project Closed
        窒素固定;極域;北極海;メタゲノム;亜熱帯海域;南極海;UCYN-A
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-19H04263/
      • Viral infection and its control mechanisms of marine plankton communities as revealed by dissolved ribosomal RNA
        Grant-in-Aid for Scientific Research (B)
        Basic Section 40030:Aquatic bioproduction science-related
        Kyoto University
        遠藤 寿
        From 01 Apr. 2022, To 31 Mar. 2026, Granted
        海洋生態;プランクトン;ウイルス;リボソームRNA;メタトランスクリプトーム
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22H02420/
      • Plankton communities contributing to marine biological pump on the global scale
        Grant-in-Aid for Scientific Research (B)
        Basic Section 63010:Environmental dynamic analysis-related
        The University of Tokyo
        塩崎 拓平
        From 01 Apr. 2022, To 31 Mar. 2025, Granted
        生物ポンプ;プランクトン;沈降粒子;炭素循環;懸濁態粒子;マリンスノー;ネットワーク解析
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22H03716/
      • Molecular ecological mechanism of bloom disintegration by viral infection
        Grant-in-Aid for Scientific Research (A)
        Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
        Kochi University
        長崎 慶三
        From 01 Apr. 2022, To 31 Mar. 2027, Granted
        赤潮プランクトン;ウイルス;糖鎖認識機構;巨大蛋白質;長鎖反復配列;赤潮;二本鎖DNAウイルスHaV;特異的感染性;感受性;クローン多様性;生え戻り現象;高度アミノ酸反復領域;長鎖反復アミノ酸長鎖配列;糖鎖;宿主特異性
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22H00385/
      • Ecology of giant viruses inhabiting the aphotic zone of the sea
        Grant-in-Aid for Scientific Research (A)
        Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
        Kyoto University
        緒方 博之
        From 01 Apr. 2022, To 31 Mar. 2026, Granted
        巨大ウイルス;無光層;生態;進化
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-22H00384/
      • Viral Infection and Its Control Mechanisms of Marine Plankton Communities as Revealed by Dissolved Ribosomal RNA
        Grant-in-Aid for Scientific Research (B)
        Basic Section 40030:Aquatic bioproduction science-related
        Kyoto University
        遠藤 寿
        From 01 Apr. 2022, To 31 Mar. 2026, Granted
        海洋生態;プランクトン;ウイルス;リボソームRNA;メタトランスクリプトーム
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-23K23685/
      • Plankton communities contributing to biological pumps from tropics to polar regions
        Grant-in-Aid for Scientific Research (B)
        Basic Section 63010:Environmental dynamic analysis-related
        The University of Tokyo
        塩崎 拓平
        From 01 Apr. 2022, To 31 Mar. 2025, Granted
        生物ポンプ;プランクトン;沈降粒子;炭素循環;懸濁態粒子;マリンスノー;ネットワーク解析
        https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-23K24971/

      External funds: others

      • A novel dynamics analysis of marine plankton based on genetic information in the dissolved fraction of seawater
        JST CREST
        Japan Science and Technology Agency, Core Research for Evolutional Science and Technology
        From 01 Oct. 2023, To 31 Mar. 2029
        鈴木 光次
        中岡 慎一郎;遠藤 寿;中岡 慎治
      • A novel dynamics analysis of marine plankton based on genetic information in the dissolved fraction of seawater
        JST さきがけ
        Japan Science and Technology Agency, Precursory Research for Embryonic Science and Technology
        From 01 Oct. 2023, To 31 Mar. 2027
        遠藤 寿
      • 海洋植物プランクトンの共生的相互作用がもたらす生態化学量論の改変とその機構
        伊藤光昌氏記念学術助成
        From 01 Apr. 2021, To 31 Mar. 2022
        遠藤 寿
      list
        Last Updated :2024/11/25

        Education

        Teaching subject(s)

        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IIB
          9066, Fall, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IIA
          9065, Spring, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics ID
          9064, Fall, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IID
          9068, Fall, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IIC
          9067, Spring, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IC
          9063, Spring, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IB
          9062, Fall, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Bioinformatics IA
          9061, Spring, Graduate School of Science, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Research Proposal Writing Practice B
          8403, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Research Proposal Writing Practice A
          8402, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Pharmaceutical Laboratory Coaching Practice A
          8301, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2024, To 31 Mar. 2025
          Bioinformatics
          3768, Spring, Faculty of Science, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Advanced Course on Biological Science A
          9011, Spring, Graduate School of Science, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Advanced Lectures : Integrative Biological Diversity
          9901, Spring, Graduate School of Science, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Bioinformatics
          9136, Spring, Graduate School of Science, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Medicinal Frontier Science Research C
          8408, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2024, To 31 Mar. 2025
          Medicinal Frontier Science Research B
          8407, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2024, To 31 Mar. 2025
          Medicinal Frontier Science Research A
          8406, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2024, To 31 Mar. 2025
          Genome Informatics
          C408, Spring, Faculty of Pharmaceutical Sciences, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Critical Reading of Scientific Papers B
          8405, Year-long, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Seminar on Critical Reading of Scientific Papers A
          8404, Year-long, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2024, To 31 Mar. 2025
          Bioinformatics I: Target Discovery
          1113, Fall, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IA
          9061, Spring, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics ID
          9064, Fall, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IC
          9063, Spring, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IB
          9062, Fall, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IIA
          9065, Spring, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IID
          9068, Fall, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IIC
          9067, Spring, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Bioinformatics IIB
          9066, Fall, Graduate School of Science, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Research Proposal Writing Practice B
          8403, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Research Proposal Writing Practice A
          8402, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Pharmaceutical Laboratory Coaching Practice A
          8301, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Advanced Bioinformatics for Drug Discovery
          8207, Fall, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2023, To 31 Mar. 2024
          Advanced Lectures : Integrative Biological Diversity
          9901, Spring, Graduate School of Science, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Bioinformatics :Advanced Course
          9137, Fall, Graduate School of Science, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Bioinformatics
          9136, Spring, Graduate School of Science, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Advanced Course on Biological Science A
          9011, Spring, Graduate School of Science, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Bioinformatics
          3768, Spring, Faculty of Science, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Skill Development for Bioinformatics
          5001, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2023, To 31 Mar. 2024
          Medicinal Frontier Science Research B
          8407, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2023, To 31 Mar. 2024
          Medicinal Frontier Science Research A
          8406, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2023, To 31 Mar. 2024
          Genome Informatics
          C408, Spring, Faculty of Pharmaceutical Sciences, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Bioinformatics I: Target Discovery
          1113, Fall, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Critical Reading of Scientific Papers B
          8405, Year-long, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2023, To 31 Mar. 2024
          Seminar on Critical Reading of Scientific Papers A
          8404, Year-long, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Skill Development for Bioinformatics
          5001, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From 01 Apr. 2022, To 31 Mar. 2023
          Pharmaceutical Laboratory Coaching Practice A
          8301, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Bioinformatics
          3768, Spring, Faculty of Science, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics ID
          9064, Fall, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IB
          9062, Fall, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Bioinformatics
          9136, Spring, Graduate School of Science, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IIA
          9065, Spring, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IID
          9068, Fall, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Research Proposal Writing Practice A
          8402, Year-long, Graduate School of Pharmaceutical Sciences, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IIC
          9067, Spring, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IA
          9061, Spring, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Advanced Course on Biological Science B
          9012, Fall, Graduate School of Science, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Critical Reading of Scientific Papers A
          8404, Year-long, Graduate School of Pharmaceutical Sciences, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IC
          9063, Spring, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Seminar on Bioinformatics IIB
          9066, Fall, Graduate School of Science, 1
        • From 01 Apr. 2022, To 31 Mar. 2023
          Advanced Lectures : Integrative Biological Diversity
          9901, Spring, Graduate School of Science, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Medical Frontier Science Research A
          8406, Year-long, Graduate School of Pharmaceutical Sciences, 4
        • From Apr. 2018, To Mar. 2019
          Bioinformatics
          Spring, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Bioinformatics
          Spring, 理学部
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IA
          Spring, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IB
          Fall, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IC
          Spring, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics ID
          Fall, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IIA
          Spring, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IIB
          Fall, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IIC
          Spring, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Seminar on Bioinformatics IID
          Fall, 理学研究科
        • From Apr. 2018, To Mar. 2019
          Skill Development for Bioinformatics
          Year-long, 薬学研究科
        • From Apr. 2018, To Mar. 2019
          Advanced Lectures:Integrative Biological Diversity
          Spring, 全学共通科目
        • From Apr. 2018, To Mar. 2019
          Advanced Lectures : Integrative Biological Diversity
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Bioinformatics
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Bioinformatics
          Spring, 理学部
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IA
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IB
          Fall, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IC
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics ID
          Fall, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IIA
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IIB
          Fall, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IIC
          Spring, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Seminar on Bioinformatics IID
          Fall, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Skill Development for Bioinformatics
          Year-long, 薬学研究科
        • From Apr. 2019, To Mar. 2020
          Bioinformatics :Advanced Course
          Fall, 理学研究科
        • From Apr. 2019, To Mar. 2020
          Bioinformatics I: Target Discovery
          Fall, 薬学研究科
        • From Apr. 2019, To Mar. 2020
          Advanced Lectures:Integrative Biological Diversity
          Spring, 全学共通科目
        • From Apr. 2019, To Mar. 2020
          Advanced Lectures : Integrative Biological Diversity
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Bioinformatics
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Bioinformatics
          Spring, 理学部
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IA
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IB
          Fall, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IC
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics ID
          Fall, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IIA
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IIB
          Fall, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IIC
          Spring, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Seminar on Bioinformatics IID
          Fall, 理学研究科
        • From Apr. 2020, To Mar. 2021
          Skill Development for Bioinformatics
          Year-long, 薬学研究科
        • From Apr. 2020, To Mar. 2021
          Advanced Lectures:Integrative Biological Diversity
          Fall, 全学共通科目
        • From Apr. 2020, To Mar. 2021
          Advanced Lectures : Integrative Biological Diversity
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Bioinformatics
          Spring, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Bioinformatics
          Spring, 理学部
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IA
          Spring, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IB
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IC
          Spring, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics ID
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IIA
          Spring, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IIB
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IIC
          Spring, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Seminar on Bioinformatics IID
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Skill Development for Bioinformatics
          Year-long, 薬学研究科
        • From Apr. 2021, To Mar. 2022
          Bioinformatics :Advanced Course
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Bioinformatics I: Target Discovery
          Fall, 薬学研究科
        • From Apr. 2021, To Mar. 2022
          Advanced Course on Biological Science B
          Fall, 理学研究科
        • From Apr. 2021, To Mar. 2022
          Advanced Lectures:Integrative Biological Diversity
          Spring, 全学共通科目
        • From Apr. 2021, To Mar. 2022
          Advanced Lectures : Integrative Biological Diversity
          Spring, 理学研究科

        Participation in PhD Defense

        • シロイヌナズナの光発芽におけるリボソーム関連遺伝子の発現についての解析
          AKAGI CHIKA, Graduate School of Science, Sub-chief Examiner
          23 Mar. 2023

        Part-time lecturer

        • From 01 Apr. 2024, To 30 Sep. 2024
          バイオインフォマティクス
          週2時間　合計6時間 , 京都大学, 理学部
        • From 01 Apr. 2023, To 30 Sep. 2023
          バイオインフォマティクス
          週2時間　合計6時間, 京都大学, 理学部
        • From 01 Apr. 2022, To 31 Mar. 2023
          バイオインフォマティクス
          週2時間　合計10時間, 理学部
        list
          Last Updated :2024/11/25

          Administration

          Faculty management (title, position)

          • From 01 Apr. 2024, To 31 Mar. 2025
            化学研究所ゲノムネット推進室運営委員会委員
          • From 01 Apr. 2023, To 31 Mar. 2024
            化学研究所講演委員会
          • From 01 Apr. 2018, To 31 Mar. 2019
            化学研究所広報委員会 委員
          • From 01 Jan. 2019, To 31 Dec. 2019
            宇治キャンパス公開2019実行委員会 委員
          list
            Last Updated :2024/11/25

            Academic, Social Contribution

            Committee Memberships

            • From 2022, To Present
              日本海洋学会「海洋環境の辞典」 編集委員会委員
            • From 2023
              日本海洋学会 2023年度秋季大会実行委員会委員
            • From 2021
              10th Aquatic Virus Workshop (AVW10) 国内組織委員会委員
            • From 2019
              19th Annual International Workshop on Bioinformatics and System Biology (IBSB2019) 国内組織委員会委員
            • From Apr. 2019, To Present
              共同代表, 日本微生物生態学会環境ウイルス研究部会

            Social Contribution

            • 海の生態系を支える植物プランクトンの世界
              Panelist, Lecturer
              京都大学研究連携基盤 基盤企画室, 第18回京都大学附置研究所・センターシンポジウム, From 04 Mar. 2023
            • 高校生のための体験型科学講座（ELCAS）
              Guest
              京都大学 教育推進・学生支援部 入試企画課, From 20 Jul. 2022
            • Round Table : Academic challenges and opportunities for early career researchers approaching SDGs
              Panelist
              Springer Nature, KURA, From 24 Mar. 2021

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