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Nagata, Takashi

Institute of Advanced Energy (IAE) Associate Professor

Nagata, Takashi
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    Last Updated :2022/08/05

    Basic Information

    Affiliated programs (koza)

    • Graduate School of Energy Science, エネルギー基礎科学専攻 エネルギー物質科学講座, 准教授

    Professional Memberships

    • THE SPECTROSCOPICAL SOCIETY OF JAPAN
    • THE BIOPHYSICAL SOCIETY OF JAPAN
    • THE NUCLEAR MAGNETIC RESONANCE SOCIETY OF JAPAN
    • THE RNA SOCIETY OF JAPAN
    • PROTEIN SCIENCE SOCIETY OF JAPAN
    • THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
    • The Biophysical Society

    Academic Degree

    • 修士(工学)(横浜国立大学)
    • 博士(工学)(横浜国立大学)

    Academic Resume (Graduate Schools)

    • 横浜国立大学, 大学院工学研究科物質工学専攻博士課程後期, 修了
    • 横浜国立大学, 大学院工学研究科物質工学専攻博士課程前期, 修了

    Academic Resume (Undergraduate School/Majors)

    • 横浜国立大学, 工学部物質工学科, 卒業

    Research History

    • From Jun. 2013, To Present
      Kyoto University, Institute of Advanced Energy, Associate professor
    • From Sep. 2011, To May 2013
      Kyoto University, Institute of Advanced Energy, Assistant professor
    • From Apr. 2009, To Aug. 2011
      Yokohama City University, 生命ナノシステム科学研究科, Assistant professor
    • From Apr. 2008, To Mar. 2009
      Yokohama City University, International College of Arts and Sciences, Assistant professor
    • From Apr. 2006, To Mar. 2008
      Yokohama City University, International College of Arts and Sciences, Assistant professor
    • From Apr. 2004, To Mar. 2006
      RIKEN, Genomic Science Research Center, Researcher
    • From Aug. 2002, To Mar. 2004
      RIKEN, Genomic Science Research Center, Research Associate
    • From Aug. 1998, To Jul. 2002
      The Rockefeller University, USA, Laboratory of Biophysics, Research Associate
    • From Apr. 1992, To Mar. 1994
      三菱化学生命科学研究所, 生物工学研究部門, 特別研究生

    Profile

    • Profile

      I am tackling the challenges involved in the production of next-generation energy, functional biopolymer, and chemical product materials from woody biomass, as well as in elucidation of the molecular mechanisms of cancer and viral diseases so as to construct the molecular fundamentals to develop new drugs. My research combines the methods used in the fields of NMR spectroscopy, genetic engineering, protein, and nucleic acid sciences, cell biology, and physical chemistry. My researches are dedicated to contributing to the achievement of SDG. Since NMR structural determination is like one of my hobbies, I enjoy it so much.

    Language of Instruction

    • English

    ID,URL

    researchmap URL

    list
      Last Updated :2022/08/05

      Research

      Research Topics, Overview of the research

      • Research Topics

        Using Structural Biology approaches to investigate the issues faced in energy and life/medical sciences
      • Overview of the research

        I am tackling the challenges involved in the production of next-generation energy, functional biopolymer, and chemical product materials from woody biomass, as well as in elucidation of the molecular mechanisms of cancer and viral diseases so as to construct the molecular fundamentals to develop new drugs. My research combines the methods used in the fields of NMR spectroscopy, genetic engineering, protein, and nucleic acid sciences, cell biology, and physical chemistry. My researches are dedicated to contribute to the achievement of SDG. My researches are dedicated to contributing to the achievement of SDG.

      Research Interests

      • in-cell NMR
      • lytic polysaccharide monooxygenase
      • LPMO
      • NMR
      • NMR
      • liquid-liquid phase separation
      • LLPS
      • DNA origami
      • 蛋白質構造
      • 核酸構造
      • 立体構造
      • 蛋白質-核酸相互作用
      • 発現制御
      • 翻訳制御
      • 転写後調節
      • transcription factor
      • 天然変性
      • 四重鎖
      • グアニン四重鎖
      • Gカルテット
      • フォールディング
      • スライディング
      • HIV
      • アミロイド
      • Musashi
      • APOBEC
      • プリオン
      • 進化分子工学
      • nanobody
      • VHH
      • SELEX
      • アプタマー
      • 核酸医薬
      • バイオマス
      • woody biomass
      • plant biomass
      • lignin carbohydrate complex
      • LCC
      • リグノセルロース
      • リグニン
      • ヘミセルロース
      • fungi
      • glucuronoyl esterase
      • マンガンペルオキシダーゼ
      • cellulase
      • 腐朽菌
      • RNAアプタマー
      • RNA工学
      • 酵素
      • 蛋白質工学
      • 安定同位体
      • ノンコーディングRNA
      • 非コードRNA
      • RNA結合蛋白質
      • 蛋白質-蛋白質相互作用
      • 核酸-蛋白質相互作用

      Research Areas

      • Life sciences, Pharmaceuticals - analytical and physicochemistry
      • Nanotechnology/Materials, Biochemistry
      • Nanotechnology/Materials, Molecular biochemistry
      • Nanotechnology/Materials, Analytical chemistry
      • Life sciences, Biophysics
      • Life sciences, Molecular biology
      • Life sciences, Structural biochemistry

      Papers

      • Comparison of dynamics between two RNA-binding domains of Musashi1.
        Watanabe M.; Kobayashi H.; Ichikawa T.; Nagata T.; Kanno R.; Okano H.; Uesugi S.; Katahira M.
        Seibutsu Butsuri, 1999
      • 2P-107 A simultaneous RNA-binding mode of two RNA-binding domains of Musashi-1 analyzed by paramagnetic effects, PRE, PCS, and RDC(The 46th Annual Meeting of the Biophysical Society of Japan)
        Nagata Takashi; Ohyama Takako; Furukawa Ayako; Sugiyama Takashi; Mashima Tsukasa; Imai Takao; Okano Hideyuki; Yamazaki Toshio; Katahira Masato
        Seibutsu Butsuri, 2008
      • Degradation of Lignin by Infrared Free Electron Laser
        Takayasu Kawasaki; Heishun Zen; Takeshi Sakai; Yoske Sumitomo; Kyoko Nogami; Ken Hayakawa; Toyonari Yaji; Toshiaki Ohta; Takashi Nagata; Yasushi Hayakawa
        Polymers, 14 Jun. 2022, Peer-reviewed
      • 1H, 13C, and 15N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis
        Kanako Kuwasako; Sakura Suzuki; Nobukazu Nameki; Masayuki Takizawa; Mari Takahashi; Kengo Tsuda; Takashi Nagata; Satoru Watanabe; Akiko Tanaka; Naohiro Kobayashi; Takanori Kigawa; Peter Güntert; Mikako Shirouzu; Shigeyuki Yokoyama; Yutaka Muto
        Biomolecular NMR Assignments, 06 Jun. 2022, Peer-reviewed
      • Functional and Structural Characterizations of Lytic Polysaccharide Monooxygenase, Which Cooperates Synergistically with Cellulases, from Ceriporiopsis subvermispora
        Huyen Nguyen; Keiko Kondo; Yusei Yagi; Yu Iseki; Nagi Okuoka; Takashi Watanabe; Bunzo Mikami; Takashi Nagata; Masato Katahira
        ACS Sustainable Chemistry & Engineering, 04 Jan. 2022, Peer-reviewed, Corresponding author
      • 1H, 13C and 15N resonance assignments and solution structures of the two RRM domains of Matrin-3
        Fahu He; Kanako Kuwasako; Masayuki Takizawa; Mari Takahashi; Kengo Tsuda; Takashi Nagata; Satoru Watanabe; Akiko Tanaka; Naohiro Kobayashi; Takanori Kigawa; Peter Güntert; Mikako Shirouzu; Shigeyuki Yokoyama; Yutaka Muto
        Biomolecular NMR Assignments, 16 Nov. 2021, Peer-reviewed
      • Glyme-Lithium Bis(trifluoromethylsulfonyl)amide Super-concentrated Electrolytes: Salt Addition to Solvate Ionic Liquids Lowers Ionicity but Liberates Lithium Ions
        Kitada A; Koujin Y; Shimizu M; Kawata K; Yoshinaka C; Saimura M; Nagata T; Katahira M; Fukami K; Murase K
        Journal of The Electrochemical Society, 03 Sep. 2021, Peer-reviewed
      • Detection of parallel and antiparallel DNA triplex structures in living human cells using in-cell NMR
        Sakamoto T; Yamaoki Y; Nagata T; Katahira M
        Chemical Communications, 17 Jun. 2021, Peer-reviewed
      • Non-coding RNA suppresses FUS aggregation caused by mechanistic shear stress on pipetting in a sequence-dependent manner
        Nesreen Hamad; Ryoma Yoneda; Masatomo So; Riki Kurokawa; Takashi Nagata; Masato Katahira
        Scientific Reports, 04 May 2021, Peer-reviewed
      • Investigation of the Interaction of Human Origin Recognition Complex Subunit 1 with G-Quadruplex DNAs of Human c-myc Promoter and Telomere Regions
        Afaf Eladl; Yudai Yamaoki; Shoko Hoshina; Haruka Horinouchi; Keiko Kondo; Shou Waga; Takashi Nagata; Masato Katahira
        International Journal of Molecular Sciences, 27 Mar. 2021, Peer-reviewed
      • An Ammonium Solvate Ionic Liquid
        Kio Kawata; Atsushi Kitada; Kazuhiro Fukami; Masayuki Saimura; Takashi Nagata; Masato Katahira; Kuniaki Murase
        Journal of The Electrochemical Society, 17 Feb. 2021, Peer-reviewed
      • Ligand Exchange Conduction of Lithium Ion in a Pentaglyme-Lithium Bis(trifluoromethylsulfonyl)amide Super-Concentrated Electrolyte
        Atsushi Kitada; Kio Kawata; Masahiro Shimizu; Masayuki Saimura; Takashi Nagata; Masato Katahira; Kazuhiro Fukami; Kuniaki Murase
        Journal of the Electrochemical Society, 14 Jan. 2021, Peer-reviewed
      • Nucleus accumbens-associated protein 1 binds DNA directly through the BEN domain in a sequence-specific manner
        Nakayama N; Sakashita G; Nagata T; Kobayashi N; Yoshida H; Park SY; Nariai Y; Kato H; Obayashi E; Nakayama K; Kyo S; Urano T
        Biomedicine, doi:10.3390/biomedicines8120608, 14 Dec. 2020, Peer-reviewed
      • Proton conduction in hydronium solvate ionic liquids affected by ligand shape
        Kio Kawata; Atsushi Kitada; Naoki Tsuchida; Masayuki Saimura; Takashi Nagata; Masato Katahira; Kazuhiro Fukami; Kuniaki Murase
        Physical Chemistry Chemical Physics, 02 Dec. 2020, Peer-reviewed
      • Development and structural determination of an anti-PrPC aptamer that blocks pathological conformational conversion of prion protein
        Tsukasa Mashima; Joon-Hwa Lee; Yuji O. Kamatari; Tomohiko Hayashi; Takashi Nagata; Fumiko Nishikawa; Satoshi Nishikawa; Masahiro Kinoshita; Kazuo Kuwata; Masato Katahira
        Scientific Reports, Dec. 2020, Peer-reviewed
      • NMR Elucidation of Nonproductive Binding Sites of Lignin Models with Carbohydrate-Binding Module of Cellobiohydrolase I
        Tokunga Y; Nagata T; Kondo K; Katahira M; Watanabe T
        Biotechnology for Biofuels, 07 Oct. 2020, Peer-reviewed
      • Structural evaluation and protium-deuterium exchange in 1-ethyl-3-methylimidazolium halide-ethylene glycol mixtures
        Chen Z; Tonouchi Y; Matsumoto K; Tsuzuki S; Nagata T; Katahira M; Hagiwara R
        Journal of Fluorine Chemistry, in press, Oct. 2020, Peer-reviewed
      • 1H, 13C and 15N resonance assignment of the YTH domain of YTHDC2
        Fahu He; Ryuta Endo; Kanako Kuwasako; Mari Takahashi; Kengo Tsuda; Takashi Nagata; Satoru Watanabe; Akiko Tanaka; Naohiro Kobayashi; Takanori Kigawa; Peter Güntert; Mikako Shirouzu; Shigeyuki Yokoyama; Yutaka Muto
        Biomolecular NMR Assignments, in press, 15 Sep. 2020, Peer-reviewed
      • Complete NMR assignment and analysis of molecular structural changes of β-O-4 lignin oligomer model compounds in organic media with different water content
        Tokunaga Y; Nagata T; Kondo K; Katahira M; Watanabe T
        HOLZFORSCHUNG, in press, Aug. 2020, Peer-reviewed
      • Direct visualization of the conformational change of FUS/TLS upon binding to promoter-associated non-coding RNA
        Hamad N; Watanabe H; Uchihashi T; Kurokawa R; Nagata T; Katahira M
        Chemical Communications, Jul. 2020, Peer-reviewed
      • Fluoride Ion Interactions in Alkali-Metal Fluoride–Diol Complexes
        Yuto Tonouchi; Kazuhiko Matsumoto; Takashi Nagata; Masato Katahira; Rika Hagiwara
        Inorganic Chemistry, 04 May 2020, Peer-reviewed
      • Suppression of Fast Proton Conduction by Dilution of a Hydronium Solvate Ionic Liquid: Localization of Ligand Exchange
        Kawase K; Kitada A; Tsuchida N; Saimura N; Nagata T; Katahira M; Fukami K; Murase K
        Journal of The Electrochemical Society, 26 Feb. 2020, Peer-reviewed
      • RNA sequence and length contribute to RNA-induced conformational change of TLS/FUS
        Hamad N; Mashima T; Yamaoki Y; Kondo K; Yoneda R; Oyoshi T; Kurokawa R; Nagata T; Katahira M
        Scientific Reports, doi: 10.1038/s41598-020-59496-0, 14 Feb. 2020, Peer-reviewed
      • How Does the Recently Discovered Peptide MIP Exhibit Much Higher Binding Affinity than an Anticancer Protein p53 for an Oncoprotein MDM2?
        Tatsuya Yamada; Tomohiko Hayashi; Simon Hikiri; Naohiro Kobayashi; Hiroshi Yanagawa; Mitsunori Ikeguchi; Masato Katahira; Takashi Nagata; Masahiro Kinoshita
        Journal of Chemical Information and Modeling, 26 Aug. 2019, Peer-reviewed
      • An insight into the dependence of the deaminase rate of human APOBEC3F on the length of single-stranded DNA, which is affected by the concentrations of APOBEC3F and single-stranded DNA
        L. Wan; K. Kamba; T. Nagata; M. Katahira
        Biochimica et Biophysica Acta, doi: 10.1016/j.bbagen.2019.04.011., Apr. 2019, Peer-reviewed, Invited, Corresponding author
      • Identification of key residues for activities of atypical glutathione S-transferase of Ceriporiopsis subvermispora, a selective degrader of lignin in woody biomass, by crystallography and functional mutagenesis
        O.W.H. Wan; B. Mikami; N. Saka; K. Kondo; M.I. Lin; T. Nagata; M. Katahira
        International Journal of Biological Macromolecules, Mar. 2019, Peer-reviewed, Corresponding author
      • The anti-prion RNA aptamer R12 disrupts the Alzheimer’s disease-related complex between prion and amyloid β
        M. Iida; T. Mashima; Y. Yamaoki; M. So; T. Nagata; M. Katahira
        FEBS J, doi: 10.1111/febs.14819, Mar. 2019, Peer-reviewed
      • Structure of a serine-type glutathione S-transferase of Ceriporiopsis subvermispora and identification of the enzymatically important non-canonical residues by functional mutagenesis
        O.W.H. Wan; B. Mikami; N. Saka; K. Kondo; T. Nagata; M. Katahira
        Biochem. Biophys. Res. Commun., doi: 10.1016/j.bbrc.2019.01.076., Feb. 2019, Peer-reviewed, Corresponding author
      • NMR Analysis on Molecular Interaction of Lignin with Amino Acid Residues of Carbohydrate-Binding Module from Trichoderma reesei Cel7A
        Tokunaga, T; Nagata, T; Suetomi, T; Oshiro, S; Kondo, K; Katahira, M; Watanabe, T
        Scientific Reports, doi: 10.1038/s41598-018-38410-9., Feb. 2019, Peer-reviewed
      • Versatility of RNA-Binding Proteins in Living Cells
        Riki Kurokawa; Akihide Takeuchi; Nobuyuki Shiina; Masato Katahira; Takefumi Yamashita; Yoko Matsuno; Keisuke Hitachi; Shinsuke Ishigaki; Nesreen Haamad; Ryoma Yoneda; Naomi Ueda; Kei Iida; Motoyasu Hosokawa; Masatoshi Hagiwara; Mamiko Iida; Tsukasa Mashima; Yudai Yamaoki; Masatomo So; Takashi Nagata; Gen Sobue; Keiko Kondo; Hiroki Watanabe; Takayuki Uchihashi
        Biomedical Sciences, 2019, Peer-reviewed
      • Noise peak filtering in multi-dimensional NMR spectra using convolutional neural networks.
        Naohiro Kobayashi; Yoshikazu Hattori; Takashi Nagata; Shoko Shinya; Peter Güntert; Chojiro Kojima; Toshimichi Fujiwara
        Bioinformatics (Oxford, England), 15 Dec. 2018, Peer-reviewed
      • Classification of fungal glucuronoyl esterases (FGEs), and characterization of two new FGEs from Ceriporiopsis subvermispora and Pleurotus eryngii
        M.I. Lin; A. Hiyama; K. Kondo; T. Nagata; M. Katahira
        Applied Microbiology and Biotechnology, Nov. 2018, Peer-reviewed, Corresponding author
      • Paritally Naked Fluoride in Solvate Ionic Liquids
        Z. Chen; Y. Tonouchi; K. Matsumoto; M. Saimura; R. Atkin; T. Nagata; M. Katahira; R. Hagiwara
        The Journal of Physical Chemistry Letters, doi: 10.1021/acs.jpclett.8b03117., Nov. 2018, Peer-reviewed
      • Characterization of the glutathione S-transferases that belong to the GSTFuA class in Ceriporiopsis subvermispora: Implications in intracellular detoxification and metabolism of wood-derived compounds
        Wan Hasnidah Wan Osman; Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        International Journal of Biological Macromolecules, 01 Jul. 2018, Peer-reviewed, Corresponding author
      • High yield production of fungal manganese peroxidases by E. coli through soluble expression, and examination of the activities
        Meng-I Lin; Takashi Nagata; Masato Katahira
        Protein Expression and Purification, 01 May 2018, Peer-reviewed, Corresponding author
      • Utilizing NMR to study RNA- and compound-binding mechanisms of Musashi-1, a stem/progenitor cell marker in various normal and cancer cells
        T. Nagata
        Integrated Cancer Science and Therapeutics, Apr. 2018, Peer-reviewed, Invited, Corresponding author
      • Direct evidence for α ether linkage between lignin and carbohydrates in wood cell walls
        H. Nishimura; A. Kamiya; T. Nagata; M. Katahira; T. Watanabe
        Scientific Reports, doi: 10.1038/s41598-018-24328-9., Apr. 2018, Peer-reviewed
      • The first successful observation of in-cell NMR signals of DNA and RNA in living human cells
        Yudai Yamaoki; Ayaka Kiyoishi; Masayuki Miyake; Fumi Kano; Masayuki Murata; Takashi Nagata; Masato Katahira
        Physical Chemistry Chemical Physics, 07 Feb. 2018, Peer-reviewed
      • The C-terminal cytidine deaminase domain of APOBEC3G itself undergoes intersegmental transfer for a target search, as revealed by real-time NMR monitoring
        Keisuke Kamba; Takashi Nagata; Masato Katahira
        Physical Chemistry Chemical Physics, 07 Feb. 2018, Peer-reviewed, Corresponding author
      • Influence of the DNA sequence/length and pH on deaminase activity, as well as the roles of the amino acid residues around the catalytic center of APOBEC3F
        Li Wan; Takashi Nagata; Masato Katahira
        Physical Chemistry Chemical Physics, 07 Feb. 2018, Peer-reviewed
      • Plastic roles of phenylalanine and tyrosine residues of TLS/FUS in complex formation with the G-quadruplexes of telomeric DNA and TERRA
        Keiko Kondo; Tsukasa Mashima; Takanori Oyoshi; Ryota Yagi; Riki Kurokawa; Naohiro Kobayashi; Takashi Nagata; Masato Katahira
        SCIENTIFIC REPORTS, Feb. 2018, Peer-reviewed
      • Multiplicity in Long Noncoding RNA in Living Cells
        Riki Kurokawa; Reina Komiya; Takanori Oyoshi; Yoko Matsuno; Hidenori Tani; Masato Katahira; Keisuke Hitachi; Yuji Iwashita; Takefumi Yamashita; Keiko Kondo; Ryoma Yoneda; Yudai Yamaoki; Naomi Ueda; Tsukasa Mashima; Naohiro Kobayashi; Takashi Nagata; Ayaka Kiyoishi; Masayuki Miyake; Fumi Kano; Masayuki Murata; Nesreen Hamad; Kohei Sasaki; Naoyuki Shoji
        Biomedical Sciences, 2018, Peer-reviewed
      • Characterisation of an aptamer against Runt domain of AML1 (RUNX1) by NMR and mutational analyses
        K. Takada; R. Amano; Y. Nomura; Y. Tanaka; S. Sugiyama; T. Nagata; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        FEBS Open Bio, Jan. 2018, Peer-reviewed
      • A hydronium solvate ionic liquid: Ligand exchange conduction driven by labile solvation
        Atsushi Kitada; Kohei Kintsu; Shun Takeoka; K. Fukami; Masayuki Saimura; Takashi Nagata; Masato Katahira; Kuniaki Murase
        Journal of the Electrochemical Society, 2018, Peer-reviewed
      • Mechanism of protein-RNA recognition: Analysis based on the statistical mechanics of hydration
        Tomohiko Hayashi; Tomoaki Matsuda; Takashi Nagata; Masato Katahira; Masahiro Kinoshita
        Physical Chemistry Chemical Physics, 2018, Peer-reviewed
      • A hydronium solvate ionic liquid: Facile synthesis of air-stable ionic liquid with strong brønsted acidity
        Atsushi Kitada; Shun Takeoka; Kohei Kintsu; Kazuhiro Fukami; Masayuki Saimura; Takashi Nagata; Masato Katahira; Kuniaki Murase
        Journal of the Electrochemical Society, 2018, Peer-reviewed
      • Conjugation of two RNA aptamers improves binding affinity to AML1 Runt domain
        Yusuke Nomura; Kaori Yamazaki; Ryo Amano; Kenta Takada; Takashi Nagata; Naohiro Kobayashi; Yoichiro Tanaka; Junichi Fukunaga; Masato Katahira; Tomoko Kozu; Yoshikazu Nakamura; Yuji Haishima; Hidetaka Torigoe; Taiichi Sakamoto
        JOURNAL OF BIOCHEMISTRY, Dec. 2017, Peer-reviewed
      • Observation by real-time NMR, and interpretation of length- and location-dependent deamination activity of APOBEC3B
        L. Wan; T. Nagata; R. Morishita; A. Takaori-Kondo; M. Katahira
        ACS Chemical Biology, DOI: 10.1021/acschembio.7b00662, 17 Nov. 2017, Peer-reviewed
      • Backbone and side chain assignments of the second RNA-binding domain of Musashi-1 in its free form and in complex with 5-mer RNA
        Ryo Iwaoka; Takashi Nagata; Kengo Tsuda; Takao Imai; Hideyuki Okano; Naohiro Kobayashi; Masato Katahira
        BIOMOLECULAR NMR ASSIGNMENTS, Oct. 2017, Peer-reviewed, Corresponding author
      • Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA
        Ryo Iwaoka; Takashi Nagata; Kengo Tsuda; Takao Imai; Hideyuki Okano; Naohiro Kobayashi; Masato Katahira
        MOLECULES, Jul. 2017, Peer-reviewed, Corresponding author
      • Development of an RNA aptamer that acquires binding capacity against HIV-1 Tat protein via G-quadruplex formation in response to potassium ions
        Yudai Yamaoki; Takashi Nagata; Tsukasa Mashima; Masato Katahira
        CHEMICAL COMMUNICATIONS, Jul. 2017, Peer-reviewed, Corresponding author
      • Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5
        Eiji Obayashi; Rafael E. Luna; Takashi Nagata; Pilar Martin-Marcos; Hiroyuki Hiraishi; Chingakham Ranjit Singh; Jan Peter Erzberger; Fan Zhang; Haribabu Arthanari; Jacob Morris; Riccardo Pellarin; Chelsea Moore; Ian Harmon; Evangelos Papadopoulos; Hisashi Yoshida; Mahmoud L. Nasr; Satoru Unzai; Brytteny Thompson; Eric Aube; Samantha Hustak; Florian Stengel; Eddie Dagraca; Asokan Ananbandam; Philip Gao; Takeshi Urano; Alan G. Hinnebusch; Gerhard Wagner; Katsura Asano
        CELL REPORTS, Mar. 2017, Peer-reviewed, Lead author
      • Structure, Dynamics, and Interaction of p54(nrb)/NonO RRM1 with 5 ' Splice Site RNA Sequence
        Jean-Baptiste Duvignaud; Mikael Bedard; Takashi Nagata; Yutaka Muto; Shigeyuki Yokoyama; Stephane M. Gagne; Michel Vincent
        BIOCHEMISTRY, May 2016, Peer-reviewed
      • Characterization of the Deamination Coupled with Sliding along DNA of Anti-HIV Factor APOBEC3G on the Basis of the pH-Dependence of Deamination Revealed by Real-Time NMR Monitoring
        Keisuke Kamba; Takashi Nagata; Masato Katahira
        FRONTIERS IN MICROBIOLOGY, Apr. 2016, Peer-reviewed, Corresponding author
      • Accurate and molecular-size-tolerant NMR quantitation of diverse components in solution
        Hideyasu Okamura; Hiroshi Nishimura; Takashi Nagata; Takanori Kigawa; Takashi Watanabe; Masato Katahira
        SCIENTIFIC REPORTS, Feb. 2016, Peer-reviewed
      • The binding specificity of Translocated in LipoSarcoma/FUsed in Sarcoma with lncRNA transcribed from the promoter region of cyclin D1
        Ryoma Yoneda; Shiho Suzuki; Tsukasa Mashima; Keiko Kondo; Takashi Nagata; Masato Katahira; Riki Kurokawa
        CELL AND BIOSCIENCE, Jan. 2016, Peer-reviewed
      • K+-responsive off-to-on switching of hammerhead ribozyme through dual G-quadruplex formation requiring no heating and cooling treatment
        Yudai Yamaoki; Takashi Nagata; Tsukasa Mashima; Masato Katahira
        BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Dec. 2015, Peer-reviewed, Corresponding author
      • Catalytic Analysis of APOBEC3G Involving Real-Time NMR Spectroscopy Reveals Nucleic Acid Determinants for Deamination
        Keisuke Kamba; Takashi Nagata; Masato Katahira
        PLOS ONE, Apr. 2015, Peer-reviewed, Corresponding author
      • Augmentation of multiple protein kinase activities associated with secondary imatinib resistance in gastrointestinal stromal tumors as revealed by quantitative phosphoproteome analysis
        Kayoko Nagata; Takao Kawakami; Yoichi Kurata; Yayoi Kimura; Yusuke Suzuki; Takashi Nagata; Yuji Sakuma; Yohei Miyagi; Hisashi Hirano
        JOURNAL OF PROTEOMICS, Feb. 2015, Peer-reviewed
      • Boosting of activity enhancement of K+-responsive quadruplex hammerhead ribozyme
        Yudai Yamaoki; Tsukasa Mashima; Takashi Nagata; Masato Katahira
        CHEMICAL COMMUNICATIONS, 2015, Peer-reviewed, Corresponding author
      • Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3
        Kengo Tsuda; Kanako Kuwasako; Takashi Nagata; Mari Takahashi; Takanori Kigawa; Naohiro Kobayashi; Peter Guentert; Mikako Shirouzu; Shigeyuki Yokoyama; Yutaka Muto
        PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, Oct. 2014, Peer-reviewed
      • Structural Basis for Inhibition of the MDM2:p53 Interaction by an Optimized MDM2-Binding Peptide Selected with mRNA Display
        Takashi Nagata; Kie Shirakawa; Naohiro Kobayashi; Hirokazu Shiheido; Noriko Tabata; Yuko Sakuma-Yonemura; Kenichi Horisawa; Masato Katahira; Nobuhide Doi; Hiroshi Yanagawa
        PLOS ONE, Oct. 2014, Peer-reviewed, Lead author, Corresponding author
      • Quantitative Analysis of Location- and Sequence-Dependent Deamination by APOBEC3G Using Real-Time NMR Spectroscopy
        Ayako Furukawa; Kenji Sugase; Ryo Morishita; Takashi Nagata; Tsutomu Kodaki; Akifumi Takaori-Kondo; Akihide Ryo; Masato Katahira
        ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, Feb. 2014, Peer-reviewed
      • Binding of an RNA aptamer and a partial peptide of a prion protein: crucial importance of water entropy in molecular recognition
        Tomohiko Hayashi; Hiraku Oshima; Tsukasa Mashima; Takashi Nagata; Masato Katahira; Masahiro Kinoshita
        NUCLEIC ACIDS RESEARCH, 2014, Peer-reviewed
      • 1H, 13C, and 15N resonance assignments of the dsRBDs of mouse RNA helicase A
        Takashi Nagata; Kengo Tsuda; Naohiro Kobayashi; Peter Güntert; Shigeyuki Yokoyama; Yutaka Muto
        Biomolecular NMR Assignments, Apr. 2013, Peer-reviewed, Lead author, Corresponding author
      • Anti-prion activity of an RNA aptamer and its structural basis.
        Tsukasa Mashima; Fumiko Nishikawa; Yuji O Kamatari; Hiromichi Fujiwara; Masayuki Saimura; Takashi Nagata; Tsutomu Kodaki; Satoshi Nishikawa; Kazuo Kuwata; Masato Katahira
        Nucleic acids research, Jan. 2013, Peer-reviewed
      • NMR study of xenotropic murine leukemia virus-related virus protease in a complex with amprenavir
        Ayako Furukawa; Hideyasu Okamura; Ryo Morishita; Satoko Matsunaga; Naohiro Kobayashi; Takahisa Ikegami; Tsutomu Kodaki; Akifumi Takaori-Kondo; Akihide Ryo; Takashi Nagata; Masato Katahira
        BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Aug. 2012, Peer-reviewed, Corresponding author
      • Solution structures of the double-stranded RNA-binding domains from RNA helicase A
        Takashi Nagata; Kengo Tsuda; Naohiro Kobayashi; Mikako Shirouzu; Takanori Kigawa; Peter Guentert; Shigeyuki Yokoyama; Yutaka Muto
        PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, Jun. 2012, Peer-reviewed, Lead author
      • Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions
        Takako Ohyama; Takashi Nagata; Kengo Tsuda; Naohiro Kobayashi; Takao Imai; Hideyuki Okano; Toshio Yamazaki; Masato Katahira
        NUCLEIC ACIDS RESEARCH, Apr. 2012, Peer-reviewed, Corresponding author
      • Intelligent' ribozyme whose activity is altered in response to K plus as a result of quadruplex formation
        Takashi Nagata; Yu Sakurai; Yukari Hara; Tsukasa Mashima; Tsutomu Kodaki; Masato Katahira
        FEBS JOURNAL, Apr. 2012, Peer-reviewed, Lead author
      • Structures of the first and second double-stranded RNA-binding domains of human TAR RNA-binding protein
        Seisuke Yamashita; Takashi Nagata; Masahito Kawazoe; Chie Takemoto; Takanori Kigawa; Peter Guentert; Naohiro Kobayashi; Takaho Terada; Mikako Shirouzu; Motoaki Wakiyama; Yutaka Muto; Shigeyuki Yokoyama
        PROTEIN SCIENCE, Jan. 2011, Peer-reviewed, Lead author
      • Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: Mechanism for an increase in DNA-binding affinity through phosphorylation
        Takashi Nagata; Emi Niyada; Natsuki Fujimoto; Yuuya Nagasaki; Kazuaki Noto; Youhei Miyanoiri; Jun Murata; Kazuyuki Hiratsuka; Masato Katahira
        PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, Nov. 2010, Peer-reviewed, Lead author
      • Unusual Thermal Disassembly of the SPFH Domain Oligomer from Pyrococcus horikoshii
        Yohta Kuwahara; Satoru Unzai; Takashi Nagata; Yoko Hiroaki; Hideshi Yokoyama; Ikuo Matsui; Takahisa Ikegami; Yoshinori Fujiyoshi; Hidekazu Hiroaki
        BIOPHYSICAL JOURNAL, Oct. 2009, Peer-reviewed
      • Structure and real-time monitoring of the enzymatic reaction of APOBEC3G which is involved in anti-HIV activity.
        A. Furukawa; T. Nagata; A. Matsugami; Y. Habu; R. Sugiyama; F. Hayashi; N. Kobayashi; S. Yokoyama; H. Takaku; M. Katahira
        Nucleic acids symposium series, Sep. 2009, Peer-reviewed
      • Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G
        Ayako Furukawa; Takashi Nagata; Akimasa Matsugami; Yuichirou Habu; Ryuichi Sugiyama; Fumiaki Hayashi; Naohiro Kobayashi; Shigeyuki Yokoyama; Hiroshi Takaku; Masato Katahira
        EMBO JOURNAL, Feb. 2009, Peer-reviewed
      • Elucidation of the mode of interaction in the UP1telomerase RNAtelomeric DNA ternary complex which serves to recruit telomerase to telomeric DNA and to enhance the telomerase activity
        Takashi Nagata; Yusuke Takada; Asami Ono; Kayoko Nagata; Yuki Konishi; Takeshi Nukina; Manami Ono; Akimasa Matsugami; Ayako Furukawa; Natsuki Fujimoto; Hirokazu Fukuda; Hitoshi Nakagama; Masato Katahira
        NUCLEIC ACIDS RESEARCH, Dec. 2008, Peer-reviewed, Corresponding author
      • N- and C-terminal fragments of a globular protein constructed by elongation of modules as a units associated for functional complementation
        Toru Tsuji; Takashi Nagata; Hiroshi Yanagawa
        JOURNAL OF BIOCHEMISTRY, Oct. 2008, Peer-reviewed
      • NMR assignments and the identification of the secondary structure of the anti-retroviral cytidine deaminase
        Furukawa A; Nagata T; Habu Y; Sugiyama R; Hayashi F; Yokoyama S; Takaku H; Katahira M
        Nucleic acids symposium series, Sep. 2008, Peer-reviewed
      • Structural analysis of Musashi-RNA complex on the basis of long-range structural information.
        T. Ohyama; A. Furukawa; T. Mashima; T. Sugiyama; S. Ohgara; T. Yamazaki; T. Imai; H. Okano; T. Nagata; M. Katahira
        Nucleic acids symposium series, Sep. 2008, Peer-reviewed
      • The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition
        Takashi Nagata; Sakura Suzuki; Ryuta Endo; Mikako Shirouzu; Takaho Terada; Makoto Inoue; Takanori Kigawa; Naohiro Kobayashi; Peter Guntert; Akiko Tanaka; Yoshihide Hayashizaki; Yutaka Muto; Shigeyuki Yokoyama
        NUCLEIC ACIDS RESEARCH, Aug. 2008, Peer-reviewed, Corresponding author
      • Interactions with RNA/DNA of proteins involved in the regulation of transcription, translation and telomere elongation.
        T. Ohyama; A. Furukawa; T. Miyoshi; Y. Takada; S. Ohgara; K. Hiratsuka; T. Imai; H. Okano; H. Nakagama; T. Nagata; M. Katahira
        Nucleic acids symposium series, Nov. 2007, Peer-reviewed
      • Origin of higher affinity to RNA of the N-terminal RNA-binding domain than that of the C-terminal one of a mouse neural protein, Musashi1, as revealed by comparison of their structures, modes of interaction, surface electrostatic potentials, and backbone dynamics
        Y Miyanoiri; H Kobayashi; T Imai; M Watanabe; T Nagata; S Uesugi; H Okano; M Katahira
        JOURNAL OF BIOLOGICAL CHEMISTRY, Oct. 2003, Peer-reviewed
      • Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA
        M Katahira; Y Miyanoiri; Y Enokizono; G Matsuda; T Nagata; F Ishikawa; S Uesugi
        JOURNAL OF MOLECULAR BIOLOGY, Aug. 2001, Peer-reviewed
      • Functional mutagenesis of AML1/RUNX1 and PEBP2 beta/CBF beta define distinct, non-overlapping sites for DNA recognition and heterodimerization by the Runt domain
        T Nagata; MH Werner
        JOURNAL OF MOLECULAR BIOLOGY, Apr. 2001, Peer-reviewed, Lead author
      • Molecular insights into the origin of the acute human leukemias revealed from the three-dimensional structure and sub-cellular localization of AML1.
        MH Werner; T Nagata; Gupta, V; M Goger; BT Chait; A Sali; WY Kim; K Shigesada; Y Ito
        CLINICAL CANCER RESEARCH, Nov. 1999, Peer-reviewed
      • Immunoglobulin motif DNA recognition and heterodimerization of the PEBP2/CBF Runt domain
        T Nagata; Gupta, V; D Sorce; WY Kim; A Sali; BT Chait; K Shigesada; Y Ito; MH Werner
        NATURE STRUCTURAL BIOLOGY, Jul. 1999, Peer-reviewed, Lead author
      • Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1
        T Nagata; R Kanno; Y Kurihara; S Uesugi; T Imai; S Sakakibara; H Okano; M Katahira
        JOURNAL OF MOLECULAR BIOLOGY, Mar. 1999, Peer-reviewed, Lead author
      • Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0
        T Nagata; Y Kurihara; G Matsuda; J Saeki; T Kohno; Y Yanagida; F Ishikawa; S Uesugi; M Katahira
        JOURNAL OF MOLECULAR BIOLOGY, Mar. 1999, Peer-reviewed, Lead author
      • Structural properties and RNA-binding activities of two RNA recognition motifs of a mouse neural RNA-binding protein, mouse-Musashi-1
        Y Kurihara; T Nagata; T Imai; A Hiwatashi; M Horiuchi; S Sakakibara; M Katahira; H Okano; S Uesugi
        GENE, Feb. 1997, Peer-reviewed, Lead author
      • Mouse-Musashi-1, a neural RNA-Binding protein highly enriched in the mammalian CNS stem cell
        S Sakakibara; T Imai; K Hamaguchi; M Okabe; J Aruga; K Nakajima; D Yasutomi; T Nagata; Y Kurihara; S Uesugi; T Miyata; M Ogawa; K Mikoshiba; H Okano
        DEVELOPMENTAL BIOLOGY, Jun. 1996, Peer-reviewed
      • MM2 MOLECULAR MECHANICS STUDIES OF PERIPLANONE-B AND NITROXIDES - EMPIRICAL-METHODS TO EVALUATE THE STRETCHING (K(S)) AND BENDING (K(B)) FORCE-CONSTANTS OF THE MM2 FORCE-FIELD
        K SAKAKIBARA; H KAWAMURA; T NAGATA; JZ REN; M HIROTA; K SHIMAZAKI; T CHUMAN
        BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, Oct. 1994, Peer-reviewed

      Misc.

      • 神経系特異的RNA結合タンパク質マウスMusashi-1の2つのRNPモチーフのRNA結合能と二次構造
        栗原 靖之; 永田 崇; 樋渡 亜土; 今井 貴雄; 榊原 伸一; 岡野 栄之; 片平 正人; 上杉 晴一
        日本分子生物学会年会プログラム・講演要旨集, 01 Aug. 1996
      • UUAGGG配列結合蛋白質hnRNP-Dの構造及びRNAとの相互作用のNMRによる研究
        永田 崇; 片平 正人; 佐伯 純一; 栗原 靖之; 上杉 晴一; 梶田 保子; 石川 冬木; 河野 俊之
        日本分子生物学会年会プログラム・講演要旨集, 01 Aug. 1996
      • Structure, dynamics and interactions with RNA of neural RNA-binding protein, Musashi.
        Kobayashi H.; Nagata T.; Kanno R.; Saeki J.; Kurihara Y.; Imai T.; Sakakibara S.; Okano H.; Uesugi S.; Katahira M.
        Biophysics, 07 Sep. 1998
      • Structure and stability of a mouse neural specific RNA binding protein, mouse-Musashi-1
        KANNO R.; NAGATA T.; SAEKI J.; KOBAYASHI H.; HIWATASHI A.; KURIHARA Y.; IMAI T.; SAKAKIBARA S.; OKANO H.; KONO T.; KATAHIRA M.; UESUGI S.
        Biophysics, Oct. 1997
      • Molecular mechanism of deamination inhibition of anti-viral factor APOBEC3G by five-membered complex of HIV-1 Vif and host proteins
        神庭圭佑; 雲財悟; 森下了; 高折晃史; 永田崇; 片平正人
        第22回日本蛋白質科学会年会,2022.06.07-09, つくば国際会議場, 07 Jun. 2022
      • Effect of site-directed mutagenesis of Aspergillus sydowii feruloyl esterase on substrate preference
        Apisan Phienluphon; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 2022 Annual Meeting of the Japan Society for Bioscience, Biotechnology and Agrochemistry, 2022.3.15-18, on-line, 18 Mar. 2022
      • A challenge to lignocellulose degradation by a laser
        Takayasu Kawasaki; Takeshi Sakai; Yoske Sumitomo; Kyoko Nogami; Ken Hayakawa; Takashi Nagata; Heishun Zen; Yasushi Hayakawa
        The 2022 Annual Meeting of the Japan Society for Bioscience, Biotechnology and Agrochemistry, 2022.3.15-18, on-line, 15 Mar. 2022
      • The synergistic effect on cellulose degradation of LPMO9 of wood rot fungi, Ceriporiopsis subvermispora
        Yusei Yagi; Keiko Kondo; Huyen Nguyen; Takashi Watanabe; Bunzo Mikami; Takashi Nagata; Masato Katahira
        The 2022 Annual Meeting of the Japan Society for Bioscience, Biotechnology and Agrochemistry, 2022.3.15-18, on-line, 15 Mar. 2022
      • Cell surface display of fungal feruloyl esterase in Pichia pastoris
        Apisan Phienluphon; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 72nd Annual Meeting of Japan Wood Research Society, 2022.3.15-17, Nagoya-Gifu, on-line, 15 Mar. 2022
      • Boost in beech wood’s lignin degradation by heterogeneously expressed manganese peroxidase by using a semi-continuous bioreactor system
        Sze Kai Kenneth Teo; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 72nd Annual Meeting of Japan Wood Research Society, 2022.3.15-17, Nagoya-Gifu, on-line, 15 Mar. 2022
      • Structural analysis of ester-type lignin-carbohydrate linkages
        Hiroshi Nishimura; Kazuma Nagata; Takashi Nagata; Masato Katahira; Takashi Watanabe
        The 72nd Annual Meeting of Japan Wood Research Society, 2022.3.15-17, Nagoya-Gifu, on-line, 15 Mar. 2022
      • The structure and dynamics of DNA and RNA in living human cells studied by in-cell NMR
        Yudai Yamaoki; Takashi Nagata; Tomoki Sakamoto; Shohei Takami; Masato Katahira
        Pacifichem 2021, virtual, 16 Dec. 2021, Peer-reviewed
      • Analysis of enzymatic cleavage of lignin-carbohydrate linkage in woody biomass by fungal glucuronoyl esterase
        Keiko Kondo; Yuta Sakurai; Yuka Yonezawa; Meng-I Lin; Takashi Nagata; Masato Katahira
        Pacifichem 2021, virtual, 16 Dec. 2021, Peer-reviewed
      • Structural and physical basis for anti-prion activity and destruction of the Alzheimer’s disease-related complex of an RNA-aptamer
        Takashi Nagata; Tsukasa Mashima; Joon-Hwa Lee; Yuji O. Kamatari; Tomohiko Hayashi; Masahiro Kinoshita; Kazuo Kuwata; Masato Katahira
        Pacifichem 2021, virtual, 16 Dec. 2021, Peer-reviewed, Lead author
      • NMR analysis of RNA aptamer that binds to Vif complex
        Yuta-Sekigami; Kazuyuki Kumagai; Takuya Suzuki; Yuto Sekikawa; Keisuke Kamba; Li Wan; Kayoko Nagata; Akifumi Takaori-Kondo; Masato Katahira; Takashi Nagata; Taiichi Sakamoto
        The 44th Annual Meeting of the Molecular Biology Society of Japan, 2021.12.1-3, Pacifico Yokohama, Dec. 2021
      • NMR analysis of the interactions between DNA:RNA hybrid G-quadruplex and arginine-glycine-rich peptides
        Chihiro Nakayama; Yudai Yamaoki; Takashi Nagata; Masato Katahira
        The 44th Annual Meeting of the Molecular Biology Society of Japan, 2021.12.1-3, Pacifico Yokohama, Dec. 2021
      • Development of AFM-based quadruplex DNA evaluation method using machine learning
        Yoichiro Tanaka; Takashi Nagata; Chika Sugimoto; Toshio Ogino
        The 44th Annual Meeting of the Molecular Biology Society of Japan, 2021.12.1-3, Pacifico Yokohama, Dec. 2021
      • Effect of the charged residues on inhibition of APOBEC3G by HIV-1 Vif
        Kamba K; Wan L; Unzai S; Morishita R; Nagata T; Katahira M
        The 44th Annual Meeting of the Molecular Biology Society of Japan, 2021.12.1-3, Pacifico Yokohama, Dec. 2021
      • Structural basis for Musashi-1-RNA complex formation
        Tu WH; Kamba K; Imai T; Kobayashi N; Guntert P; Nagata T; Katahira M
        The 44th Annual Meeting of the Molecular Biology Society of Japan, 2021.12.1-3, Pacifico Yokohama, Dec. 2021
      • NMR Analysis of Interaction between Artificial Peptides and RNAs Derived from HIV-1 Rev and RRE RNA
        Sakamoto T; Nagata T; Koji R; Maeda T; Takeda Y; Kobayashi N; Guntert P; Katahira M; Smith CA; Harada K
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • Structural basis for Musashi-1-RNA complex formation
        Tu WH; Kamba K; Imai T; Kobayashi N; Guntert P; Nagata T; Katahira M
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • NMR spectroscopic analysis of enzymatic cleavage of lignin-carbohydrate linkage in woody biomass by fungal glucuronoyl esterase
        Kondo K; Sakai Y; Yonezawa Y; Meng-I, L; Nagata T; Katahira M
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • In-cell NMR analysis of the DNA triplex structures inside the living human cells
        Sakamoto T; Yamaoki Y; Nagata T; Katahira M
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • In-cell NMR Analysis of the Structure and Dynamics of Hairpin and G-quadruplex Structures in the Living Human Cells
        Yamaoki Y; Nagata T; Kondo K; Sakamoto T; Takami S; Katahira M
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • Catalytic analysis demonstrates that the inhibition of deamination reaction of A3G by Vif complex can be independent of A3G's ubiquitination
        Kamba K; Wan L; Unzai S; Morishita R; Nagata T; Katahira M
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • Study of the Interaction Between Human Origin Recognition Complex Subunit 1 and G-quadruplex Forming Nucleic Acids
        Afaf Eladl; Yudai Yamaoki; Shoko Hoshina; Haruka Horinouchi; Keiko Kondo; Takashi Nagata; Shou Waga; Masato Katahira
        Joint Conference of ISMAR-APNMR-NMRSJ-SEST 2021, on-line, 21.08.23-27, 22 Aug. 2021, Peer-reviewed
      • 様々な合成条件で調製した Dehydrogenation polymer の性状解析
        德永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第71回日本木材学会大会, 2021.3.19-21, 東京農工大学府中キャンパス, on-line, Mar. 2021
      • 選択的白色腐朽菌由来の溶解性多糖モノオキシゲナーゼと セルラーゼのシナジー効果の検証
        Yagi Y; Kondo K; Nagata T; Katahira M
        第71回日本木材学会大会, 2021.3.19-21, 東京農工大学府中キャンパス, on-line, Mar. 2021
      • Screening and heterologous expression of fungal feruloyl esterases, a lignin- carbohydrate complex degrading enzymes, in Pichia pastoris X-33
        Phienluphon A; Kondo K; Nagata T; Katahira M
        日本農芸化学会2021年度仙台大会, 2021.3.18-21, on-line, Mar. 2021
      • Analysis of the interaction between Msi1 RBD1-RBD2 and RNAs
        Tu. W. H; Kamba K; Nagata T; Katahira M
        第43回日本分子生物学会年会, 2020.12.2-4, online, 03 Dec. 2020
      • 腐朽菌由来グルクロノイルエステラーゼ による天然リグニン-多糖複合体の分解活性評価
        米沢柚香; 近藤敬子; 坂井勇太; 林孟宜; 永田崇; 片平正人
        第 43 回日本分子生物学会年会, 2020.12.2-4, オンライン開催, 02 Dec. 2020
      • Investigation of the interaction between human origin recognition complex subunit 1 and G-rich DNAs
        A. Eladl; Y. Yamaoki; S. Hoshina; H. Horinouchi, K; Kondo; O. Eladl; T. Nagata; S. Waga
        第 43 回日本分子生物学会年会, 2020.12.2-4, オンライン開催, Dec. 2020
      • 好冷菌 Sclerotinia borealis 由来 β-グルコシダーゼの クローニングおよびキャラクタリゼーション
        堀内正隆; 国永史郎; 齋藤泉; 片平正人; 永田崇
        第 43 回日本分子生物学会年会, 2020.12.2-4, オンライン開催, Dec. 2020
      • In-cell NMR 法による非標準構造を形成する DNA のヒト生細胞 内観測
        阪本知樹; 山置佑大; 永田崇; 片平正人
        第 43 回日本分子生物学会年会, 2020.12.2-4, オンライン開催, Dec. 2020
      • NMR analysis of aptamers that bind to the Vif-CBFβ-CUL5-ELOB-ELOC complex
        Kumagai K; Suzuki T; Sekikawa Y; Kamba K; Wan L; Nagata K; Takaori A; Katahira M; Nagata T; Sakamoto T
        第59回NMR討論会(2020), Gメッセ群馬(高崎), 2020.11.17-19, 19 Nov. 2020
      • HIV Vif 5者複合体はAPOBEC3GとAPOBEC3Fの脱アミノ化を阻害する
        神庭 圭佑; 万 里; 雲財 悟; 森下 了; 永田 崇; 片平 正人
        第59回NMR討論会(2020), Gメッセ群馬(高崎), 2020.11.17-19, 17 Nov. 2020
      • 有機溶媒-水系におけるb-O-4結合型リグニンオリゴマーモデルの2次元NMRスペクトルの帰属と高次構造の解析
        Yuki Tokunaga; Takashi Nagata; Keiko Kondo; Masato Katahira; Takashi Watanabe
        第17回持続的生存圏創成のためのエネルギー循環シンポジウム・第10回先進素材開発解析システム(ADAM)シンポジウム, Kyoto Univ., Uji, 2020.10.30, Oct. 2020
      • Research and development of enzymatic activity control using VHH antibody
        A. Takaori-Kondo; T. Nagata
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, 15 Sep. 2020
      • NMR analysis for the development of artificial RNAs to control biomolecular functions
        K. Kumagai; T. Suzuki; Y. Sekikawa; K. Kamba; L. Wan; K. Nagata; A. Takaori-Kondo; M. Katahira; T. Nagata
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, 15 Sep. 2020
      • Elucidation of correlation between G-quadruplex-based gene expression regulation and their structure
        Y. Tanaka; T. Nagata; T. Ogino
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, 15 Sep. 2020
      • NMR analysis of the three-dimensional solution structure of the sequence-specific RNA-binding protein Musashi involved in translation control of the downstream target RNA
        W.-H. Tu; K. Kamba; T. Nagata; M. Katahira; T. Imai
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, 15 Sep. 2020
      • Development of the crystalline cellulose degradation system consisting of the psychrophilic fungus-type hybrid enzymes
        M. Horiuchi; S. Kuninaga; I. Saito; M. Katahira; T. Nagata
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, 15 Sep. 2020
      • Interaction analysis between cellulase carbohydrate-binding module and lignin by ultra-high sensitivity NMR for biorefinery
        Takashi Watanabe; Yuki Tokunaga; Takashi Nagata; Keiko Kondo; Masato Katahira
        The 11th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2020.9.15-16, Sep. 2020
      • Heterologous expression and oxidative activity of four fungal ligninolytic enzymes by Pichia pastoris
        Kenneth TSK; Kondo K; Nagata T; Katahira M
        日本農芸化学会2020年度大会, 2020.3.25-28, 九州大学伊都キャンパス, 25 Mar. 2020
      • 選択的白色腐朽菌が産する溶解性多糖モノオキシゲナーゼの構造および活性の解析
        Kondo K; Nguyen H; Wangsamihardja A; Kodaki T; Mikami B; Watanabe T; Nagata T; Katahira M
        日本農芸化学会2020年度大会, 2020.3.25-28, 九州大学伊都キャンパス, 25 Mar. 2020
      • リグニン・多糖複合体分解に関与する白色腐朽菌由来グルクロノイルエステラーゼの速度論解析および添加剤耐性
        Sakai Y; Lin MI; Hiyama A; Yonezawa Y; Kondo K; Nagata T; Katahira M
        日本農芸化学会2020年度大会, 2020.3.25-28, 九州大学伊都キャンパス, 25 Mar. 2020
      • In-cell NMR法を用いた非標準構造を形成する核酸の構造安定性の解析
        Sakamoto T; Yamaoki Y; Kano F; Murata M; Nagata T; Katahira M
        第100回日本化学会年会, 2020.3.22-25, 東京理科大学, 22 Mar. 2020
      • リグニンオリゴマーモデルとセルラーゼ糖質結合モジュール間の相互作用を原子・分子レベルで可視化するためのNMR解析
        Tokunaga Y; Nagata T; Kondo K; Katahira M; Watanabe T
        第70回日本木材学会大会, 2020.3.16-18, 鳥取大学, 16 Mar. 2020
      • Oxidative activity of four heterologously expressed fungal ligninolytic enzymes by Pichia pastoris
        Kenneth TSK; Kondo K; Nagata T; Katahira M
        第70回日本木材学会大会, 2020.3.16-18, 鳥取大学, 16 Mar. 2020
      • STRUCTURAL AND PHYSICAL BASIS FOR THE HIGHER AFFINITY TO ONCOPROTEIN MDM2 OF A PEPTIDE SELECTED WITH MRNA DISPLAY OVER TUMOR SUPPRESSOR P53
        Nagata T; Yamada T; Hayashi T; Hikiri S; Kobayashi N; Ikeguchi M; Katahira M; Kinoshita M; Yanagawa H
        64th Annual Meeting of the Biophysical Society, San Diego, 2020.2.15-19, 16 Feb. 2020, Lead author
      • 安定同位体標識リグニンオリゴマーモデルを用いたセルラーゼ糖質結合モジュールとの相互作用解析
        Tokunaga Y; Nagata T; Kondo K; Katahira M; Watanabe T
        第402回生存圏シンポジウム 第16回持続的生存圏創成のためのエネルギー循環シンポジウム−マイクロ波高度利用と先端分析化学−・第9回先進素材開発解析システム(ADAM)シンポジウム−マイクロ波高度利用生存圏フラッグシップ共同研究−, 2019.12.18, 京都大学宇治キャンパス, 18 Dec. 2019
      • AFMで測定したDNA粒子の特徴抽出と機械学習による四重鎖判別法の開発
        田中陽一郎; 永田崇; 萩野俊郎
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • NADPH再生系を内包するハイブリッド型アゾレダクターゼの開発
        堀内正隆; 永田崇; 片平正人; 小橋川敬博; 鈴木定彦; 落合正則
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • Promoter associated non-coding RNA, pncRNA, can diminish the aggregation of TLS caused by shearing stress
        Hamad NH; Mashima T; Yamaoki Y; Kondo K; Yoneda R; Kurokawa R; Nagata T; Katahira, M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • Ubiquitination independent inhibition of the human APOBEC3G by HIV Vif
        Kamba K; Wan L; Unzai S; Morishita R; Nagata T; Katahira M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • Characterization of aptamers that bind to the Vif - CBFβ - CUL 5 - ELOB - ELOC complex
        Kumagai K; Suzuki T; Sekikawa Y; Kamba K; Wan Li; Nagata K; Takaori-Kondo T; Katahira M; Nagata T; Sakamoto T
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • X-ray crystal structure analysis and activity assay of lytic polysaccharide monooxygenase originated from selective white-rot fungus
        Kondo K; Nguyen H; Wangsamihardja A; Kodaki T; Mikami B; Watanabe T; Nagata T; Katahira M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • Analysis of structure and dynamics of nucleic acids introduced inside the living human cells by in-cell NMR
        Yamaoki Y; Nagata T; Sakamoto T; Takami S; Kano F; Murata M; Katahira M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • in-cell NMR analysis of the non-canonical structure of nucleic acids introduced inside the living human cells: the formation and the stability
        Sakamoto T; Yamaoki Y; Kano F; Murata M; Nagata T; Katahira M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • Analysis of nucleic acid-ligand interaction inside the living human cells by in-cell NMR
        Takami S; Yamaoki Y; Kano F; Murata M; Sakamoto T; Harada K; Nagata T; Katahira M
        第42回日本分子生物学会年会, 福岡国際会議場(福岡)2019.12.3-6, Dec. 2019
      • In-cell NMR studies on structural stabilities of DNA and RNA introduced inside the living human cells
        Yamaoki Y, Nagata T, Takami S, Sakamoto T, Katahira M
        The 58th Annual Meeting of the NMR Society of Japan (2019), Kawasaki Convention Hall (Kawasaki)2019.11.7-9, 09 Nov. 2019
      • Structural and functional study of anti-prion aptamers having high activity
        Nagata T; Mashima T; Lee JH; Kamatari YO; Hayashi T; Kinoshita, M; Kuwata K; Katahira M
        The 58th Annual Meeting of the NMR Society of Japan(2019)(Joint Annual Meeting of the 58th NMRJ & the 58th SEST)2019.11.7-9, Nov. 2019
      • Evaluation of the structure and dynamics of nucleic acids inside the living human cells by in-cell NMR spectroscopy
        山置佑大, 永田崇, 清石 彩華, 三宅 雅之, 加納ふみ, 村田昌之, 片平正人
        第57回日本生物物理学会年会, シーガイア(宮崎), 2019.9.24-26, Sep. 2019
      • Fractionation and analysis of lignin-carbohydrate complex using lignin-degrading enzymes
        Saho Kashima; Hiroshi Nishimura; Shizuka Sakon; Misato Yamada; Yasuhiro Shimane; Yukari Ohta; Keiko Kondo; Yudai Yamaoki; Takashi Nagata; Masato Katahira; Takashi Watanabe
        1st International Lignin Symposium (ILS), 20190914, Hokkaido Univ., Sep. 2019
      • Interaction analysis between cellulase carbohydrate-binding module and lignin by ultra-high sensitivity NMR for biorefinery
        Watanabe, T; Tokunaga, Y; Ohshiro S; Nishimura, H; Kishimoto, T; Nakamura, M; Kondo, K; Nagata, T; Katahira, M
        The 10th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2019.9.4-6, Sep. 2019
      • The observation of in-cell NMR signals of nucleic acids in living human cells
        Yamaoki Y; Kiyoishi A; Miyake M; Lin KH; Kano F; Murata M; Nagata T; Katahira M
        7th International Meeting of Quadruplex Nucleic Acids, Changchun, 2019.09.06-09, Sep. 2019
      • Inhibition mechanism of HIV Vif–human E3 ubiquitin ligase complex against enzymatic activity of APOBEC3G
        Kamba K; Wan L; Unzai S; Morishita R; Nagata T; Katahira M
        The 57th Annual Meeting of The Biophysical Society of Japan, Miyazaki, 2019.09.24-26, Sep. 2019
      • The effect of the distance between the RNA sequences recognized by two RNA-binding domains on the affinity of the MSI1-RNA interaction
        Tu WH; Kamba K; Nagata T; Katahira M
        The 57th Annual Meeting of The Biophysical Society of Japan, Miyazaki, 2019.09.24-26, Sep. 2019
      • NMR Analysis for Molecular Insight into the Interaction between Lignin and Carbohydrate Binding Module of Cel7A from Trichoderma reesei
        Tokunaga, Y; Nagata, T; Kondo, K; Katahira, M; Watanabe, T
        The 20th International Symposium on Wood, Fiber and Pulping Chemistry, Univ. Tokyo, 2019.09.09-11, Sep. 2019
      • Structural analyses of covalent linkages between lignin and hemicellulose in wood cell walls
        H. Nishimura; K. Nagata; M. Yamada; T. Nagata; M. Katahira; T. Watanabe
        1st International Lignin Symposium, Sapporo. 2019.9.13-15, Sep. 2019
      • NMR study on Binding Sites of 13C-Lignin Oligomer Models with Carbohydrate Binding Module of Cel7A from Trichoderma reesei
        Tokunaga, Y; Nagata, T; Kondo, K; Katahira, M; Watanabe, T
        1st International Lignin Symposium, Sapporo. 2019.9.13-15, Sep. 2019
      • Strategy of lignocellulose conversion using catalysts with controlled affinity to lignin
        Watanabe, T; Tokunaga, Y; Oshiro, S; Saito, K; Okano, H; Nishimura, H; Nagata, T; Kondo, K; Katahira, M; Isozaki, K; Takaya, H; Nakamura, M
        1st International Lignin Symposium, Sapporo. 2019.9.13-15, Sep. 2019
      • セルラーゼ糖質結合モジュールに対するリグニンモデル吸着部位の解析
        德永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第33回セルラーゼ研究会, 佐久平プラザ(長野), 2019.8.20-21, Aug. 2019
      • Disruption of the Alzheimer’s disease-related complex between prion and amyloid β by an anti-prion aptamer
        T. Mashima; Y. M. Iida; Yamaoki; M. So; T. Nagata; M. Katahira
        Commemorative International Symposium of the Japan Society of Nucleic Acids Chemistry (CISNAC) 2019, Konan University, 2019.07.22-24, Jul. 2019
      • In-cell NMR analysis for structure and dynamics of nucleic acids introduced inside the living human cells
        Y. Yamaoki; T. Nagata; A. Kiyoishi; M. Miyake; L. Kuan-Heng; S. Takami; F. Kano; M. Murata; M. Katahira
        第21回日本RNA学会年会, 東京大学, 2019.07.17-19, Jul. 2019
      • Development and structural determination of an RNA aptamer that blocks conformational conversion of prion protein
        Tsukasa Mashima; Joon-Hwa Lee; Yuji O. Kamatari; Tomohiko Hayashi; Takashi Nagata; Fumiko Nishikawa; Satoshi Nishikawa; Masahiro Kinoshita; Kazuo Kuwata; Masato Katahira
        第21回日本RNA学会年会, 東京大学, 2019.07.17-19, Jul. 2019
      • An insight into the target search and HIV Vif-dependent inactivation of APOBEC3F and APOBEC3G elucidated by tracking the deamination events
        Kamba K; Wan L; Nagata T; Katahira M
        8th Asia-Pacific NMR Symposium, Nanyang Technol Univ (Singapore), 2019.07.03-06, Jul. 2019, Peer-reviewed
      • The deamination rates of APOBEC3F and APOBEC3G are affected by their concentrations and that of DNAs, as well as the length of the DNAs
        Kamba K; Wan L; Nagata T; Katahira M
        第19回日本蛋白質科学会年会 第71回日本細胞生物学会大会 合同年次大会, 神戸国際会議場, 2019.06.24-26, Jun. 2019
      • 白色腐朽菌Pleurotus eryngii由来のリグニン・多糖複合体分解酵素グルクロノイルエステラーゼの発現・精製・活性検証と各種添加剤の活性への影響に関する速度論解析
        坂井勇太; 林孟宜; 檜山明穂; 近藤敬子; 永田崇; 片平正人
        第69回日本木材学会大会, 函館アリーナ(北海道) 2019.3.14-16, Mar. 2019
      • 13Cラベル化リグニンオリゴマーモデルを用いたセルラーゼ糖質結合モジュールとの相互作用解析
        徳永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第69回日本木材学会大会, 函館アリーナ(北海道) 2019.3.14-16, Mar. 2019
      • 選択的白色菌Ceriporiopsis subvermispora由来lytic polysaccharide monooxygenase (LPMO) の反応性の解析
        井関優侑; 大城理志; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第385回生存圏シンポジウム 2018.11.26京都大学(宇治市), Nov. 2018
      • NMR化学シフト摂動法を用いたセルラーゼ糖質結合モジュールとリグニン間相互作用の解析
        徳永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第385回生存圏シンポジウム 2018.11.26京都大学(宇治市), Nov. 2018
      • Development of RNA Aptamer That Has High Anti-prion Activity and Its Structural Basis
        Mashima, M; Joon-Hwa, L; Kamatari, Y. O; Hayashi, T; Nishikawa, F; Nagata, T; Nishikawa, S; Kinoshita, M; Kuwata, K; Katahira, M
        Japan Society of Nucleic Acids Chemistry, Nov. 2018
      • In-cell NMR studies on structure and dynamics of DNA and RNA introduced inside the living human cells
        Yamaoki Y; Nagata T; Kiyoishi A; Miyake M; Lin K; Takami S; Kano F; Murata M; Katahira M
        ISNAC2018, Kyoto Univ (Kyoto), 2018.11.7-9, Nov. 2018
      • NMR法によるリグニン-セルラーゼ糖質結合モジュール間吸着の解析
        徳永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第63回リグニン討論会, 東京農工大学(東京)2018.11.1-2, Nov. 2018
      • Classification of a lignin-carbohydrate complex (LCC) degradation enzymes, fungal glucuronoyl esterases (FGEs), and expression/ characterization of two new FGEs of white rot fungi
        Lin MI; Hiyama A; Kondo K; Y Sakai; Nagata T; Katahira M
        第63回リグニン討論会, 東京農工大学(東京)2018.11.1-2, Nov. 2018
      • In-cell NMR analysis for structure and dynamics of nucleic acids introduced inside the living human cells
        Yamaoki Y; Nagata T; Kiyoishi Y; Miyake M; Kuan-Heng L; Takami S; Kano F; Murata M; Katahira M
        第41回日本分子生物学会年会, パシフィコ横浜(横浜)2018.11.28-30, Nov. 2018
      • HIV Vif– human E3 ubiquitin ligase complex directly inhibits the enzymatic activity of APOBEC3G
        Kamba K; Wang N; Unzai S; Morishita R; Nagata T; Katahira M
        第41回日本分子生物学会年会, パシフィコ横浜(横浜)2018.11.28-30, Nov. 2018
      • Selection of 2’F-modified aptamers against Vif - CBFβ - CUL 5 - ELOB - ELOC complex
        Sekikawa Y; Mizusawa K; Kamba K; Suzuki T; Wan L; Katahira M; Nagata T; Sakamoto T
        第41回日本分子生物学会年会, パシフィコ横浜(横浜)2018.11.28-30, Nov. 2018
      • Selection and characterization of aptamers against Vif - CBFβ - CUL 5 - ELOB - ELOC complex
        鈴木拓也; 万里; 関川湧斗; 田中陽一郎; 神庭圭介; 片平正人; 永田崇; 坂本泰一
        第41回日本分子生物学会年会, パシフィコ横浜(横浜)2018.11.28-30, Nov. 2018
      • 中分子アゴニスト創薬のロジカルデザイン
        高折晃史; 北脇年雄; 永田崇
        第2回モダリティ創薬デザイン研究会, グランフロント大阪(大阪) 2018.11.26, Nov. 2018
      • Fractionation and analysis of lignin-carbohydrate complex in wood cell wall
        Saho Kashima; Hiroshi Nishimura; Shizuka Sakon; Misato Yamada; Yukari Ohta; Keiko Kondo; Yudai Yamaoki; Takashi Nagata; Masato Katahira; Takashi Watanabe
        The 3rd Asia Research Node Symposium on Humanosphere Science, NCHU, Taiwan, 20180926: P19, Sep. 2018
      • Fractionation and structural analysis of enzyme-treated lignin-carbohydrate complexes
        Hiroshi Nishimura; Shizuka Sakon; Misato Yamada; Kazuma Nagata; Takashi Nagata; Masato Katahira; Yukari Ohta; Takashi Watanabe
        lignobiotech 2018, p17, 5th Symposium of Biotechnology Applied to Lignocelluloses, Helsinki, 01 Sep. 2018
      • An RNA aptamer disrupts the interaction of prion protein with Amyloid β
        Iida M; Mashima T; Yamaoki Y; So M; Nagata T; Katahira M
        The 56th Annual Meeting of the Biophysical Society of Japan, Okayama Univ (Okayama), 2018.9.15-17, Sep. 2018
      • Real-Time NMR Analysis of the Continuous Degradation Process of Azo Dyes using Azoreductase in Cooperation with the NADPH Regeneration System
        Horiuchi M; Nagata T; Katahira M; Kobashigawa Y; Suzuki Y; Ochiai M
        The 9th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2018.9.3-5, Sep. 2018
      • Development of Lignocellulose Degrading Saccharomyces Cerviciae via Cell-Surface Display of Lytic Polysaccharide Monooxygenase
        Mousa MOM; Kondo K; Khattab S; Nagata T; Abdul-Raouf UM; Watanabe T; Katahira M
        The 9th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2018.9.3-5, Sep. 2018
      • Development of Functional Peptides that Bind to RNA
        Watanabe N; Kinase T; Nomura Y; Nagata T; Katahira M; Sakamoto T
        The 9th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2018.9.3-5, Sep. 2018
      • Interaction Analysis Between Cellulase Carbohydrate-Binding Module and Lignin by Ultra-High Sensitivity NMR for Biorefinery
        Watanabe T; Tokunaga T; Ohshiro S; Nishimura H; Kishimoto T; Nakamura M; Kondo T; Nagata T; Katahira M
        The 9th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2018.9.3-5, Sep. 2018
      • Hopping Conduction in A Hydronium Solvate Ionic Liquid
        Kitada A; Fukami K; Saimura M; Nagata T; Katahira M
        The 9th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2018.9.3-5, Sep. 2018
      • Characteristics of the C-terminal domain of anti-viral factor APOBEC3G: mechanism behind a target search and inhibition by HIV-1 Vif protein
        Kamba K; Nagata T; Katahira M
        XXVIII International Conference on Magnetic Resonance in Biological Systems, Univ Col Dublin (Ireland), 2018.8.19-24, Sep. 2018
      • NMR analysis of Non-productive Binding of Carbohydrate Binding Module of Cellobiohydrolase with Lignin
        Tokunaga T; Nagata T; Kondo K; Katahira M; Watanabe T
        The 3rd Asia Research Node Symposium on Humanosphere Science, National Chung Hsing University (Taiwan) 2018.9.25-27, Sep. 2018
      • Physical origin of the large difference between MDM2-p53NTD and -MIP complexes in binding free energy
        Yamada T; Hayashi T; Kobayashi N; Yanagawa H; Katahira M; Nagata T; Kinoshita M
        The 56th Annual Meeting of The Biophysical Society of Japan, Sep. 2018
      • Deep-MagRO: 深層学習を応用した高速かつ高精度な統合的NMR解析システム
        小林直宏; 杉木俊彦; 永田崇; 古賀信康; Peter Güntert; 児嶋長次郎; 藤原敏道
        第57回NMR討論会 札幌コンベンションセンター(札幌市), 2018.9.18-20, Sep. 2018
      • In-cell NMR studies on structure and dynamics of DNA and RNA introduced inside the living human cells
        Yamaoki Y; Nagata T; Kiyoishi Y; Miyake M; Kano F; Murata M; Katahira M
        第57回NMR討論会 札幌コンベンションセンター(札幌市), 2018.9.18-20, Sep. 2018
      • 抗プリオン活性を有する四重鎖RNAの構造解析
        真嶋司; Lee Joon-Hwa; 林 智彦; 西川富美子; 鎌足雄司; 永田崇; 西川諭; 桑田一夫; 木下 正弘; 片平正人
        第57回NMR討論会 札幌コンベンションセンター(札幌市), 2018.9.18-20, Sep. 2018
      • Approaches for valorization of lignovelluloses using microwave technology and lignin-binding catalysts
        Takashi Watanabe; Chen Qu; Satoshi Oshiro; Hiroshi Nishimura; Keiichiro Kashimura; Takashi Nagata; Masato Katahira; Katsuhiro Isozaki; Hikaru Takaya; Masaharu Nakamura
        lignobiotech 2018, p21, 5th Symposium of Biotechnology Applied to Lignocelluloses, Helsinki, 31 Aug. 2018
      • Observation of imino proton signals of DNA and RNA introduced inside the living human cells by using in-cell NMR spectroscopy
        Yamaoki Y; Nagata T; Kiyoishi Y; Miyake M; Kano F; Murata M; Katahira M
        XXVIII International Conference on Magnetic Resonance in Biological Systems, Univ Col Dublin (Ireland), 2018.8.19-24, Aug. 2018
      • Structural and theoretical insights into the RNA-recognition mechanism by Musashi-1
        Nagata T; Iwaoka R; Hayashi T; Tsuda K; Kobayashi N; Kinoshita M; Katahira M
        XXVIII International Conference on Magnetic Resonance in Biological Systems, Univ Col Dublin (Ireland), 2018.8.19-24, Aug. 2018
      • Application of Deep Neural Networks for Highly Accurate NMR Structure Analysis by Deep-MagRO
        Kobayashi N; Sugiki T; Hattori Y; Nagata T; Shinya S; Wurz JM; Koga R; Koga N; Guntert P; Kojima C; Fujiwara T
        XXVIII International Conference on Magnetic Resonance in Biological Systems, Univ Col Dublin (Ireland), 2018.8.19-24, Aug. 2018
      • 白色腐朽菌Ceriporiopsis subvermispora由来lytic polysaccharide monooxygenase (LPMO) の反応性の解析
        井関優侑; 大城理志; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第32回セルラーゼ研究会, 佐久平プラザ(長野), 2018.7.13-14, Jul. 2018
      • Trichoderma reesei由来Cel7AのCBM1がリグニンに吸着するメカニズムの解析
        徳永有希; 永田崇; 近藤敬子; 片平正人; 渡辺隆司
        第32回セルラーゼ研究会, 佐久平プラザ(長野), 2018.7.13-14, Jul. 2018, Invited
      • Inhibition of the interaction of prion protein with Amyloid β by an anti-prion aptamer
        飯田 真美子; 真嶋 司; 山置 佑大; 宗 正智; 永田 崇; 片平正人
        第20回日本RNA学会年会2018.7.9-11ホテルコスモスクエア国際交流センター(大阪), Jul. 2018
      • Interaction between HIV-1 RRE RNA and artificial peptides
        Nomura Y; Watanabe N; Kinase T; Nagata T; Katahira M; Harada K; Sakamoto T
        第20回日本RNA学会年会2018.7.9-11ホテルコスモスクエア国際交流センター(大阪), Jul. 2018
      • Selection and characterization of aptamers against Vif - CBFβ - CUL 5 - ELOB - ELOC complex
        鈴木拓也; 万里; 関川湧斗; 田中陽一郎; 神庭圭介; 片平正人; 永田崇; 坂本泰一
        平成30年度日本生化学会関東支部例会, 埼玉大学(埼玉), 2018.6.23, Jun. 2018
      • Interaction of HIV Vif-E3 ubiquitin ligase complex with nucleic acid
        K. Kamba; T. Nagata; M. Katahira
        18th Annual Meeting of the Protein Science Society of Japan 2018.06.26-28, Tokimess (Niigata), Jun. 2018
      • Detection of different conformational changes of Translocated in liposarcoma, TLS, upon its binding to various nucleic acids
        Nesreen Hamad; Tsukasa Mashima; Yudai Yamaoki; Hiroki Watanabe; Takayuki Uchihashi; Riki Kurokawa; Takashi Nagata; Masato Katahira
        18th Annual Meeting of the Protein Science Society of Japan 2018.06.26-28, Tokimess (Niigata), Jun. 2018
      • セルラーゼ糖質結合モジュールとリグニン間相互作用部位のNMRによる解析
        徳永有希; 大城理志; 永田崇; 近藤敬子; 西村裕志; 片平正人; 渡辺隆司
        第68回日本木材学会, 京都大学(京都), 2018.3.14-16, Mar. 2018
      • NADPH再生系を伴ったアゾレダクターゼによるアゾ染料分解反応のNMR解析
        堀内正隆; 永田崇; 片平正人; 小橋川敬博; 鈴木定彦; 落合正則
        日本分子生物学会年会プログラム・要旨集(Web), 2018
      • Modeling of the tandem RNA-binding domains of a neural and oncogenic protein, Musashi1, engaging the minimum target RNA
        Ryo Iwaoka; Takashi Nagata; Kengo Tsuda; Takao Imai; Hideyuki Okano; Naohiro Kobayashi; Masato Katahira
        ConBio2017, 神戸ポートアイランド(神戸)2017.12.6-9, Dec. 2017
      • The effect of different target nucleic acids on the structural change of TLS
        Nesreen Hamad; Tsukasa Mashima; Hiroki Watanabe; Takayuki Uchihashi; Riki Kurokawa; Takashi Nagata; Masato Katahira
        ConBio2017, 神戸ポートアイランド(神戸)2017.12.6-9, Dec. 2017
      • Interaction between non-coding RNA and TLS/FUS protein, and structural change
        Mashima, T; Nagata, T; Hamad, N; Ozawa, S; Yamaoki, Y; Kondo, K; Watanabe, H; Yoneda, R; Uchihashi, T; Kurokawa, R; Katahira, M
        The 44th International Symposium on Nucleic Acids Chemistry, Nov. 2017
      • Binding analysis of tandem dimer of lignin-binding peptide and design of artificial enzyme carrying the peptide for enhanced lignin degradation
        Satoshi Oshiro; Asako Yamaguchi; Hiroshi Nishimura; Takashi Nagata; Masato Katahira; Takashi Watanabe
        HSS2017 and 7th ISSH meeting, Bogor, Indonesia (oral), Nov. 2017
      • Studies on lytic polysaccharide monooxygenase (LPMO) from the selective white rot fungus, Ceriporiposis subvermispora
        Yuu Iseki; Satoshi Oshiro; Takashi Nagata; Keiko Kondo; Hiroshi Nishimura; Masato Katahira; Takashi Watanabe
        Humanosphere Science School 2017, Salak Tower (Bogor, Indonesia), 2017.11.1-2, Nov. 2017
      • Analysis of Adsorption Mechanism between Carbohydrate Binding Module of Cellulase and Lignin by NMR
        Yuki Tokunaga; Satoshi Oshiro; Takashi Nagata; Keiko Kondo; Hiroshi Nishimura; Masato Katahira; Takashi Watanabe
        Humanosphere Science School 2017, Salak Tower (Bogor, Indonesia), 2017.11.1-2, Nov. 2017
      • Analysis of Lignin-Carbohydrate Complexes in Woody Biomass by Using NMR
        Shizuka Sakon; Hiroshi Nishimura; Misato Yamada; Yukari Ohta; Keiko Kondo; Yudai Yamaoki; Takashi Nagata; Masato Katahira; Takashi Watanabe
        Humanosphere Science School 2017, Salak Tower (Bogor, Indonesia), 2017.11.1-2, Nov. 2017
      • Interactions between eukaryotic initiation factors implicated during ribosomal scanning and start codon recognition
        Takashi Nagata; Hisashi Yoshida; Satoru Unzai; Takeshi Urano; Katsura Asano; Eiji Obayashi
        The 56th Annual Meeting of the NMR Society of Japan, Tokyo Metropolitan Univ., Hachioji, 2017.11.14-16, Nov. 2017
      • Observation of in-cell NMR signals of DNA and RNA in living human cells
        Yudai Yamaoki; Ayaka Kiyoishi; Masayuki Miyake; Fumi Kano; Masayuki Murata; Takashi Nagata; Masato Katahira
        The 56th Annual Meeting of the NMR Society of Japan, Tokyo Metropolitan Univ., Hachioji, 2017.11.14-16, Nov. 2017
      • A robust approach for highly automated NMR structure analysis assisted by deep neural networks
        Naohiro Kobayashi; Takashi Nagata; Yoshikazu Hattori; Shoko Shinya; Julia M. Würz; Peter Güntert; Chojiro Kojima; Toshimichi Fujiwara
        The 56th Annual Meeting of the NMR Society of Japan, Tokyo Metropolitan Univ., Hachioji, 2017.11.14-16, Nov. 2017
      • Structural determination of Musashi1 RBD2:r(GUAGU) and structural insight of target RNA selection mechanisms
        Ryo Iwaoka; Takashi Nagata; Kengo Tsuda; Takao Imai; Hideyuki Okano; Naohiro Kobayashi; Masato Katahira
        The 56th Annual Meeting of the NMR Society of Japan, Tokyo Metropolitan Univ., Hachioji, 2017.11.14-16, Nov. 2017
      • Characterization of the cytidine deamination properties of human APOBEC3B by real-time NMR, which are quite different from those of APOBEC3G
        Li Wan; Takashi Nagata; Ryo Morishita; Akifumi Takaori-Kondo; Masato Katahira
        The 44th International Symposium on Nucleic Acids Chemistry, The 1st Annual Meeting of Japan Society of Nucleic Acids Chemistry, Tokyo University of Science (Tokyo), 2017.11.14-16, Nov. 2017
      • Sphingombium sp. YG1由来guaiacylglycerol-β-guaiacyl ether - Cα位酸化酵素の酵素学的解析と利用
        前田亜鈴悠; 宋晶; 西真郎; 黒澤佳奈子; 市川淳子; 塩谷美夏; 山置佑大; 永田崇; 片平正人; 山田美紗登; 西村裕志; 渡辺隆司; 大田ゆかり
        第62回リグニン討論会、名古屋大学, poster, Oct. 2017
      • Analysis of peroxidase activity, lignin model degradation of heterologous expressed soluble fungal ligninolytic enzymes
        Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        2017 Taiwan-Japan Biomedical Symposium on Magnetic Resonance, National Cheng Kung University (Tainan), 2017.10.15-17, Oct. 2017
      • Enzymatic characterization and application of guaiacylglycerol-β-guaiacyl ether – Cα-dehydrogenases from Sphingobium sp. YG1
        Allyn H. Maeda; Jing Song; Shinro Nishi; Kanako Kurosawa; Junko Ichikawa; Mika Shioya; Yudai Yamaoki; Takashi Nagata; Masato Katahira; Misato Yamada; Hiroshi Nishimura; Takashi Watanabe; Yukari Ohta
        第62回リグニン討論会, 名古屋大学(名古屋)2017.10.26-27, Oct. 2017
      • フラグメント分子軌道法を活用したリグニンβ-O-4還元開裂酵素の機能改変
        嶋根康弘; 黒澤佳奈子; 市川淳子; 前田亜鈴悠; 布浦拓郎; 山置佑大; 永田崇; 片平正人; 高谷光; 吉田亮太; 中村正治; 渡辺隆司; 大田ゆかり
        第62回リグニン討論会, 名古屋大学(名古屋)2017.10.26-27, Oct. 2017
      • Kinetic studies of the two fungal glutathione-dependent enzymes and their potential roles in the intracellular detoxification and wood-derived compound metabolism
        Wan Hasnidah; Wan Osman; Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 62nd Lignin Symposium in Nagoya, 2017.10.26-27, Oct. 2017
      • Structural analysis of lignocellulosic biomass by solution-state NMR for future biorefinery
        Takashi Watanabe; Hiroshi Nishimura; Chen Qu; Misato Yamada; Shizuka Sakon; Takao Kishimoto; Masaharu Nakamura; Keiko Kondo; Takashi Nagata; Makoto Katahira
        The 8th International Symposium of Advanced Energy Science - Interdisciplinary Approach to Zero Emission Energy (poster), Sep. 2017
      • Development of the artificial multi-domain enzymes immobilized on the curdlan sheet at low cost.
        Masataka Horiuchi; Takashi Nagata; Masato Katahira; Yoshihiro Kobashigawa; Yasuhiko Suzuki; Masanori Ochiai
        The 8th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2017.9.5-6, Sep. 2017
      • Structure-function relationship of Epstein-Barr Virus EBNA3C NLS and transport receptor
        Go Matsuda; Takashi Nagata; Masato Katahira; Ken-ichi Imadome
        The 8th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2017.9.5-6, Sep. 2017
      • NMR studies for the complex of TLS/FUS protein and G-quadruplexes of telomeric DNA and TERRA, which induces telomere shortening
        Keiko Kondo; Tsukasa Mashima; Takanori Oyoshi; Riki Kurokawa; Naohiro Kobayashi; Takashi Nagata; Masato Katahira
        55th Annual Meeting of the Biophysical Society of Japan, Kumamoto Univ., Kumamoto, 2017.9.19-21., Sep. 2017
      • Influences of length and concentration of the DNA substrate, as well as the location of the target sequence, on deamination by APOBEC3F
        Li Wan; Takashi Nagata; Masato Katahira
        55th Annual Meeting of the Biophysical Society of Japan, Kumamoto Univ., Kumamoto, 2017.9.19-21., Sep. 2017
      • An anti-prion aptamer inhibits the formation of prion protein-amyloid β oligomer complex that is related to Alzheimer's disease
        Mamiko IIDA; Tsukasa MASHIMA; Yudai YAMAOKI; Takashi NAGATA; Masato KATAHIRA
        55th Annual Meeting of the Biophysical Society of Japan, Kumamoto Univ., Kumamoto, 2017.9.19-21., Sep. 2017
      • 18-crown-6を用いるヒドロニウム溶媒和イオン液体の基礎物性
        北田敦; 竹岡駿; 近都康平; 深見一弘; 才村正幸; 永田崇; 片平正人; 邑瀬邦明
        2017年電気化学会秋季大会 2017.9.10-11、長崎大学文教地区キャンパス, Sep. 2017
      • Development of RNA binding peptides based on tertiary structural information
        Natsuki Watanabe; Tomoaki Kinase; Takashi Nagata; Masato Katahira; Kazuo Harada; Taiichi Sakamoto
        The 8th International Symposium of Advanced Energy Science, Kyoto Univ., Uji, 2017.9.5-6, Sep. 2017
      • Structural study for the recognition of non-coding RNA by TLS/FUS
        Tsukasa Mashima; Shunsuke Ozawa; Nesreen Hamad; Ryoma Yoneda; Riki Kurokawa; Takashi Nagata; Masato Katahira
        第19回日本RNA学会年会2017.7.19-21富山国際会議場(富山), Jul. 2017
      • NMR法によるセルラーゼ糖質結合モジュール-リグニン間相互作用の解明
        徳永有希; 大城理志; 永田崇; 近藤敬子; 西村裕志; 片平正人; 渡辺隆司
        第31回セルラーゼ研究会 長野 2017.7.7-8, Jul. 2017
      • Conformational change detection of translocated in liposarcoma, TLS, upon binding to various RNAs
        Nesreen Hamad; Tsukasa Mashima; Yudai Yamaoki; Keiko Kondo; Takashi Nagata; Masato Katahira
        第19回日本RNA学会年会 富山国際会議場.2017.7.19-21, Jul. 2017
      • NMR Analysis of Interaction Mechanism between Carbohydrate Binding Module of Cellulase and Lignin
        Yuki Tokunaga; Satoshi Oshiro; Keiko Kondo; Takashi Nagata; Hiroshi Nishimura; Masato Katahira; Takashi Watanabe
        The 2nd Asia Research Node Symposium on Humanosphere Science.2017.7.19-21.Kyoto Univ. (Uji), Jul. 2017
      • HIV-1 RRE由来のRNA断片と人工ペプチドの相互作用の解析
        渡邊 なつき; 木名瀬智章; 永田崇; 片平正人; 原田和雄; 坂本泰一
        平成29年度日本生化学会関東支部例会, 東京医科歯科(東京), 2017.6.17, Jun. 2017
      • Study of RNA-recognition by TLS/FUS and its conformational change via binding
        T. Mashima; S. Ozawa; N. Hamad; R. Yoneda; R. Kurokawa; T. Nagata; M. Katahira
        第17回日本蛋白質科学会年会 2017.6.20-22、仙台国際センター(仙台), Jun. 2017
      • Highly automated NMR signal assignments using peak-noise recognition assisted by Deep Neural Networks
        Kobayashi, N; Nagata, T; Kojima, C; Fujiwara, T
        Gordon Research Conference. Computational Aspects-Biomol NMR.2017.6.11-16.Grand Summit Hotel Sunday River.(Newy,ME,USA), Jun. 2017
      • High yield production, activity analysis, and homologous modeling of soluble fungal peroxidases expressed in E. coli
        Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        17th Annual Meeting of the Protein Science Society of Japan, Jun. 2017
      • Intersegmental transfer of APOBEC3G was monitored by real-time NMR method
        Kamba K; Nagata T; Katahira M
        17th Annual Meeting of the Protein Science Society of Japan, Jun. 2017
      • Invention of RNA aptamer and ribozyme whose activities switch on in response to K+ via G-quadruples formation
        Yamaoki, Y; Mashima, T; Nagata, T; Katahira, M
        6th International Meeting on Quadruplex Nucleic Acids, May 2017
      • リグノセルロースの糖-リグニン複合体とその酵素反応の解析
        西村 裕志; 左近 静香; Jenny Arnling Baath; Amanda Ristinmaa; Johanna Nilsson; Gunnar Westman; Lisbeth Olsson; 永田 一真; 永田 崇; 片平 正人; 渡辺 隆司
        第67回日本木材学会大会、九州大学(福岡市)、2017.3.17-19, Mar. 2017
      • 安定同位体標識法を用いたセルラーゼ糖質結合モジュールとリグニン間相互作用のNMRによる解析
        徳永有希; 大城理志; 永田崇; 近藤敬子; 西村裕志; 片平正人; 渡辺隆司
        第67回日本木材学会大会、九州大学(福岡市)、2017.3.17-19, Mar. 2017
      • Characterization of Glutathione-Dependent Enzymes from White Rot Fungi
        Wan Hasnidah; Wan Osman; Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 2017 Annual Meeting of The Japan Society for Biosci, Biotechnol and Agrochem、ウェスティン都ホテル京都(京都市)、2017.3.17-20, Mar. 2017
      • Heterologous expression of the ligninolytic enzymes from wood rotting fungi and analysis of peroxidase activity, lignin model degradation, and homologous modeling
        Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        The 2017 Annual Meeting of The Japan Society for Biosci, Biotechnol and Agrochem、ウェスティン都ホテル京都(京都市)2017.3.17-20, Mar. 2017
      • Characterization of the deamination activity of APOBEC3B by real-time NMR, which is distinct from that of APOBEC3G
        Li Wan; Takashi Nagata; Ryo Morishita; Akifumi Takaori-Kondo; Masato Katahira
        7th Asia-Pacific NMR Symposium, Indian Institute of Science (Bangalore), 2017.02.16-19, Feb. 2017
      • Sliding and intersegmental transfer along DNA enhance the enzymatic activity of APOBEC3G as revealed by real-time NMR monitoring methods
        Keisuke Kamba; Takashi Nagata; Masato Katahira
        7th Asia-Pacific NMR Symposium, Indian Institute of Science (Bangalore), 2017.02.16-19, Feb. 2017
      • 木質バイオマス中の糖-リグニン複合体の解析と酵素による分解
        左近静香; 西村裕志; Arnling Baath Jenny; Ristinmaa Amanda; Nilsson Johanna; Westman Gunnar; Olsson Lisbeth; 永田一真; 永田 崇; 片平正人; 渡辺隆司
        第330回生存圏シンポジウム 第13回持続的生存圏創成のためのエネルギー循環シンポジウム—マイクロ波高度利用と先端分析化学—, poster, 2017.1.10, Jan. 2017
      • NMR study for the recognition of non-coding RNA and DNA by TLS/FUS, a key regulator of the transcriptional repression by cyclin D1 and telomere
        K. Kondo; T. Mashima; T. Oyoshi; R. Yoneda; R. Kurokawa; T. Nagata; M. Katahira
        International Symposium for NMR of Nucleic Acids,Gyeongsang National Univ. (Korea),2017.1.17, Jan. 2017
      • Development of K+-responsive RNA aptamer and ribozyme, and in-cell NMR of nucleic acids in human cells
        Y. Yamaoki; A. Kiyoishi; T. Mashima; F. Kano; M. Murata; T. Nagata; M. Katahira
        International Symposium for NMR of Nucleic Acids,Gyeongsang National Univ. (Korea),2017.1.17, Jan. 2017
      • リアルタイムNMRモニタリング法による酵素反応の定量解析及びヒト抗ウイルス因子APOBEC3Gの脱アミノ化機構の解明
        神庭圭佑; 永田崇; 片平正人
        定量生物学の会年会、岡崎コンファレンスセンター(岡崎)、2017.1.8-1.9, Jan. 2017
      • NMR analysis of interaction of TLS/FUS and non-coding RNA/DNA, a key event for regulation of CCND1 transcription and telomere shortening
        Keiko Kondo; Tsukasa Mashima; Takanori Oyoshi; Ryoma Yoneda; Riki Kurokawa; Takashi Nagata; Masato Katahira
        第55回NMR討論会 広島国際会議場, 広島国際会議(広島市),2016.11.16-18, Nov. 2016
      • Supramolecular structure and stereoselective enzymatic reaction of wood biomass, and in-cell NMR of nucleic acids
        Yudai Yamaoki; Kazuma Nagata; Ayaka Kiyoishi; Hiroshi Nishimura; Fumi Kano; Masayuki Murata; Yukari Ohta; Takashi Watanabe; Takashi Nagata; Masato Katahira
        第55回NMR討論会 広島国際会議場, 広島国際会議(広島市),2016.11.16-18, Nov. 2016
      • 深層学習に支援されたNMRシグナルの自動解析
        小林直宏; 服部良一; 永田崇; 児嶋長次郎; 藤原敏道
        第55回NMR討論会 広島国際会議場, 広島国際会議(広島市),2016.11.16-18, Nov. 2016
      • Structural basis of RNA-recognition by TLS/FUS which repress cyclin D1 via binding to a non-coding RNA
        Tsukasa Mashima; Shunsuke Ozawa; Keiko Kondo; Nesreen Hamad; Ryoma Yoneda; Riki Kurokawa; Takashi Nagata; Masato Katahira
        第39回日本分子生物学会年会、パシフィコ横浜(横浜市)、2016.11.30-12.2, Nov. 2016
      • The effects of prion protein and a RNA molecule that binds to prion protein on Aβ fibrillation
        Mamiko IIDA; Tsukasa MASHIMA; Yudai YAMAOKI; Takashi NAGATA; Masato KATAHIRA
        第54回日本生物物理学会年会、つくば国際会議場(つくば市)、2016.11.25-27, Nov. 2016
      • Sliding as well as intersegmental transfer on DNA enhances target search of human anti-viral factor APOBEC3G: Insight by the real-time NMR study
        Kamba, K; Nagata, T; Kahitara, M
        第54回日本生物物理学会年会、つくば国際会議場(つくば市)、2016.11.25-27, Nov. 2016
      • Characterization of the deamination activity of APOBEC3B by real-time NMR, which is distinct from that of APOBEC3G
        Li Wan; Takashi Nagata; Ryo Morishita; Akifumi Takaori-Kondo; Masato Katahira
        第54回日本生物物理学会年会、つくば国際会議場(つくば市)、2016.11.25-27, Nov. 2016
      • Analysis of β-O-4 cleaving enzyme, GST4, from the marine bacterium, Novosphingobium sp. MBES04
        Yasuhiro Shimane; Allyn H Maeda; Mika Shioya; Kanako Kurosawa; Jyunko Ichikawa; Takuro Nunoura; Yudai Yamaoki; Takashi Nagata; Masato Katahira; Hikaru Takaya; Ryota Yoshida; Masaharu Nakamura; Takashi Watanabe; Yukari Ohta
        第61回リグニン討論会、京都大学(宇治市)、2016.10.27-28, Oct. 2016
      • Heterologous expression and structure-activity relationship analysis of the oxidative enzymes from wood rotting fungi that are involved in lignocellulose degradation
        Meng-I Lin; Keiko Kondo; Takashi Nagata; Masato Katahira
        第61回リグニン討論会、京都大学(宇治市)、2016.10.27-28, Oct. 2016
      • Analysis of interaction between lignin and peptides for lignocellulosic biorefinery
        Asako Yamaguchi; Takashi Suetomi; Satoshi Oshiro; Yuki Tokunaga; Hiroshi Nishimura; Takashi Nagata; Tsukasa Mashima; Masato Katahira; Katsuhiro Isozaki; Masaharu Nakamura; Takashi Watanabe
        第61回リグニン討論会、京都大学(宇治市)、2016.10.27-28, Oct. 2016
      • Investigation of the interactions between eukaryotic initiation factors implicated during ribosomal scanning and start codon recognition
        NAGATA Takashi
        The 42nd Naito Conference on “In the Vanguard of Structural Biology: Revolutionizing Life Sciences” CHÂTERAISÉ Gateaux Kingdom SAPPORO, Sapporo, 2016.10.4-7, Oct. 2016, Peer-reviewed
      • Integrating strategy for production of bioethanol and lignin derivatives from rice straw
        Khattab, S; Kondo, K; Lin, M. I; Mashima, T; Nagata, T; Katahira, M
        The 7th International Symposium of Advanced Energy Science -Frontier of Zero Emission Energy-, Sep. 2016
      • Low-cost degradation of azo dyes using the GRP-tagged azoreductase combined with NADPH regeneration enzymes immobilized on the curdlan sheet
        Masataka Horiuchi; Yasuhiko Suzuki; Masanori Ochiai; Takashi Nagata; Masato Katahira
        The 7th International Symposium of Advanced Energy Science.Uji, Sep. 2016
      • Development of artificial RNA and artificial peptide to control gene expression by using NMR
        Yumi Takeda; Takashi Nagata; Ryo Amano; Yusuke Nomura; Kazuo Harada; Colin A. Smith; Masato Katahira; Taiichi Sakamoto
        The 7th International Symposium of Advanced Energy Science.Uji, Sep. 2016
      • Non-coding RNA/DNA recognition by TLS/FUS that causes repression of cyclin D1 transcription and telomere elongation
        Kondo, K; Mashima, T; Oyoshi, T; Yoneda, R; Kurokawa, R; Nagata, T; Katahira, M
        The 43rd International Symposium on Nucleic Acids Chemistry, Kumamoto Univ., Kumamoto, 2016.9.27-29, Sep. 2016
      • Invention of K+-responsive Tat-binding RNA aptamer and hammerhead ribozyme, and in-cell NMR of nucleic acids
        Yudai Yamaoki; Ayaka Kiyoishi; Tsukasa Mashima; Fumi Kano; Masayuki Murata; Takashi Nagata; Masato Katahira
        The 43rd International Symposium on Nucleic Acids Chemistry, Kumamoto Univ., Kumamoto, 2016.9.27-29, Sep. 2016
      • カリウムイオン応答性Tat結合RNAアプタマーおよびハンマーヘッドリボザイムの創製およびin-cell NMR法による細胞内核酸の観測
        山置 佑大; 清石 彩華; 真嶋 司; 加納 ふみ; 村田 昌之; 永田 崇; 片平 正人
        第10回バイオ関連化学シンポジウム、第31回生体機能関連化学シンポジウム、第19回バイオテクノロジー部会シンポジウム、石川県立音楽堂(金沢市)、2016.9.7-9.9, Sep. 2016
      • NMR studies of non-coding RNA and DNA recognition by TLS/FUS which induces transcriptional repression of cyclin D1 and telomere shortenin
        Kondo, K; Mashima, T; Oyoshi, T; Yoneda, R; Kurokawa, R; Nagata, T; Katahira, M
        The XXVIIth International Conference on Magnetic Resonance in Biological Systems, Aug. 2016
      • Deamination mechanism coupled with sliding along single-stranded DNA of anti-HIV factor APOBEC3G as investigated by real-time NMR spectroscopy
        Kamba, K; Nagata, T; Katahira M
        The XXVIIth International Conference on Magnetic Resonance in Biological Systems, Aug. 2016
      • Accurate and molecular-size-tolerant NMR quantitation of diverse compounds, and real-time monitoring of enzymatic reaction
        Okamura, H; Kamba, K; Nishimura, H; Kigawa, T; Watanabe, T; Nagata, T; Katahira, M
        The XXVIIth International Conference on Magnetic Resonance in Biological Systems, Kyoto International Conference Center、2016.21-26, Aug. 2016
      • K+-responsive Activation of Ribozyme System via Structural Transition from Duplex to Dual-quadruplex Requiring no Heating and Cooling Treatment
        Yudai Yamaoki; Takashi Nagata; Tsukasa Mashima; Masato Katahira
        The XXVIIth International Conference on Magnetic Resonance in Biological Systems, Kyoto International Conference Center、2016.21-26, Aug. 2016
      • Analysis of molecular interaction of peptides with lignin for lignocellulosic biorefinery
        Watanabe, T; Yamaguchi, A; Oshiro, S; Suetomi, T; Nishimura, H; Nagata, T; Mashima, T; Katahira, M; Isozaki, K; Takaya, H; Nakamura, M
        4th Symposium on Biotechnology applied to Lignocelluloses. CSIC downtown Campus (Madrid), 2016.6.19-22, Jun. 2016
      • ヒト抗HIV因子APOBEC3Gの標的探索及び脱アミノ化には静電相互作用が支配的である
        神庭 圭佑; 永田 崇; 片平正人
        新学術領域「柔らかな分子系」第 16 回 ワークショップ, Jun. 2016
      • カリウムイオンを認識して活性をオフからオンへと切り替えるTat結合RNAアプタマーおよびハンマーヘッドリボザイムの開発
        山置佑大; 永田崇; 真嶋司; 片平正人
        新学術領域「柔らかな分子系」第 16 回 ワークショップ, Jun. 2016
      • NMR analysis of interaction between TLS/FUS and non-coding RNA which causes transcriptional repression of cyclin D1
        真嶋司; 小澤 駿介; 近藤 敬子; 永田崇; 黒川 理樹; 片平 正人
        The 16th Annual Meeting of the Protein Science Society of Japan, Fukuoka, Jun 2016, Jun. 2016
      • The effects of prion protein and RNA molecule that targets prion protein on Aβ fibrillation
        Mamiko IIDA; Tsukasa MASHIMA; Yudai YAMAOKI; Takashi NAGATA; Masato KATAHIRA
        The 16th Annual Meeting of the Protein Science Society of Japan, Fukuoka, Jun 2016, Jun. 2016
      • NMR analysis of the recognition of non-coding RNA and DNA by TLS/FUS which causes transcriptional repression of cyclin D1 and telomere shortening
        Tsukasa Mashima; Keiko Kondo; Takanori Oyoshi; Ryoma Yoneda; Riki Kurokawa; Takashi Nagata; Masato Katahira
        The RNA Society of Japan 18th Annual Meeting AND The 21st Annual Meeting of the RNA Society, Jun. 2016
      • Binding properties of high-affinity RNA aptamers against AML1 Runt domain
        Ryo Amano; Kenta Takada; Yoichiro Tanaka; Takashi Nagata; Masato Katahira; Yoshikazu Nakamura; Tomoko Kozu; Taiichi Sakamoto
        The RNA Society of Japan 18th Annual Meeting AND The 21st Annual Meeting of the RNA Society, Jun. 2016
      • K+-responsive activation of dual-quadruplex forming ribozyme system requiring no heating and cooling treatment
        Yudai Yamaoki; Tsukasa Mashima; Takashi Nagata; Masato Katahira
        The RNA Society of Japan 18th Annual Meeting AND The 21st Annual Meeting of the RNA Society, Jun. 2016
      • Binding properties of RNA aptamer against AML1 Runt domain
        R. Amano; K. Takada; T. Nagata; Y. Nomura; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        Aptamer 2016, St Hilda's College, Oxford, UK, 2016.4.4-5, Apr. 2016
      • Tandem GGA repeat G-quadruplex as an anti-prion protein aptamer and a K+-responsive structural/functional switching device
        T. Nagata; T. Mashima; Y. Yamaoki; F. Nishikawa; Y.O. Kamatari; S. Nishikawa; K. Kuwata; M. Katahira
        Aptamer 2016, St Hilda's College, Oxford, UK, 2016.4.4-5, Apr. 2016
      • 転写因子AML1のDNA結合部位を標的とする高親和性RNAアプタマーの開発と解析
        天野亮; 高田健多; 田中陽一郎; 永田崇; 片平正人; 中村義一; 神津知子; 坂本泰一
        第5回日本生物物理学会関東支部会、桐生, Mar. 2016
      • Binding properties of RNA aptamer that binds to the transcription factor AML1 Runt domain
        R. Amano; K. Takada; Y. Tanaka; T. Nagata; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        The 8th Takeda Science Foundation Symposium on PharmaSciences, Osaka, Jan. 2016
      • NMR study of RNA aptamer that binds to the transcription factor AML1 Runt domain
        T. Sakamoto; R. Amano; Y. Nomura; T. Nagata; M. Katahira; J. Fukunaga; Y. Tanaka; Y. Nakamura; T. Kozu
        The 8th Takeda Science Foundation Symposium on PharmaSciences, Osaka, Jan. 2016
      • 転写因子AML1 Runt domainを標的とした高親和性RNAアプタマーの特徴
        高田健多; 天野亮; 田中陽一郎; 永田崇; 片平正人; 中村義一; 神津知子; 坂本泰一
        第38回日本分子生物学会年会、神戸, Dec. 2015
      • Analysis of the biocharacteristics of APOBEC3F by real-time NMR
        Li Wan; Keisuke Kamba; Takashi Nagata; Masato Katahira
        第38回日本分子生物学会年会、神戸, Dec. 2015
      • Heterologous expression and struature-activity relationship analysis of the oxidative enzymes involved in lignosellulose degradatioin from wood rotting fungi
        Mengi Lin; Takashi Nagata; Bunzo Mikami; Masato Katahira
        第38回日本分子生物学会年会、神戸, Dec. 2015
      • NMRによる実時間酵素活性アッセイにより抗ウィルス因子APOBEC3Gの脱アミノ化機構を明らかにする
        神庭圭佑; 永田崇; 片平正人
        第38回日本分子生物学会年会, Dec. 2015
      • AML1 (RUNX1)タンパク質のRuntドメインとRNAアプタマーの相互作用のNMR解析
        天野亮; 高田健多; 田中陽一郎; 永田崇; 片平正人; 野村祐介; 福永淳一; 中村義一; 神津知子; 坂本泰一
        日本核酸医薬学会第1回年会、京都, Nov. 2015
      • 海洋性Novosphingubium属細菌に由来するリグニンモデル2量体β-O-4結合開裂酵素群の酵素学的解析
        大田ゆかり; 黒澤佳奈子; 永田崇; 片平正人; 西村裕志; 渡辺隆司; 長谷川良一; 秦田勇二
        第60回リグニン討論会、つくば, Nov. 2015
      • リアルタイムNMR法の新たな展開ー抗HIVタンパク質APOBECG3Gの認識ヌクレチド、DNA上のスライディング及びエピジェネクスとの関連に関する新知見ー
        神庭圭佑; 永田崇; 片平正人
        第54回NMR討論会、千葉, Nov. 2015
      • 転写因子AML1 Runt domainに結合する高親和性RNAアプタマーのNMR解析
        高田健太; 天野亮; 田中陽一郎; 永田崇; 片平正人; 中村義一; 神津知子; 坂本泰一
        第54回NMR討論会、千葉, Nov. 2015
      • 木質バイオマスの特性を決めるリグニンー多糖結合様式の決定
        神谷明宏; 西村裕志; 永田一真; 永田崇; 渡辺隆司; 片平正人
        第54回NMR討論会、千葉, Nov. 2015
      • 異常型プリオン蛋白質の産生を抑制する四重鎖核酸の構造解析
        真嶋司; 西川富美子; 鎌足雄司; 永田崇; 西川諭; 桑田一夫; 片平正人
        第9回バイオ関連化学シンポジウム、熊本, Oct. 2015
      • カリウムイオンを認識して活性がスイッテングするTat結合RNAアプタマーおよびハンマーヘッドリボザイムの創製
        山置佑大; 真嶋司; 永田崇; 片平正人
        第9回バイオ関連化学シンポジウム、熊本, Oct. 2015
      • NMR analysis of lignin-carbohydrate complexes of wood biomass
        Akihiro Kamiya; Hiroshi Nishimura; Kazuma Nagata; Takashi Nagata; Takashi Watanabe; Masato Katahira
        6th Int. Symp. Adv. Energy Sci., Kyoto, Sep. 2015
      • Structural analysis of lignin by ultra-high sensitivity NMR for biorefinery
        T.Watanabe; H.Nishimura; T.Kishimoto; M.Nakamura; C. Qu; K. Nagata; T.Nagata; M.Katahira
        6th Int. Symp. Adv. Energy Sci., poster, Kyoto, Sep. 2015
      • NMR study of the recognition of non-coding RNA and DNA by TLS/FUS, a key regulator of cyclin D1
        Kondo, K; Mashima, T; Oyoshi, T; Kurokawa, R; Nagata, T; Katahira, M
        The 42nd International Symposium on Nucleic Acids Chemistry, Himeji, Sep. 2015
      • Nucleic acid determinants of deamination by human anti-HIV factor, APOBEC3G, as revealed by real-time NMR method
        Kamba, K; Nagata, T; Katahira, M
        The 42nd International Symposium on Nucleic Acids Chemistry, Himeji, Sep. 2015
      • Structural and biochemical studies on eIF1 with eIF3c and eIF5; rearrangement of subunit interaction for accurate recognition of AUC start codon
        Obayashi, E; Urano, T; Asano, K; Katahira, M; Nagata, T
        The 6th International Symposium of Advanced Energy Science~Towards the Realization of Zero-Emission Energy~, Sep. 2015
      • NMR analyses of RNA-peptide complexes for the development of biomolecules which regulate gene expression
        R. Amano; Y. Nomura; T. Nagata; N. Kobayashi; Y. Mori; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        The 6th International Symposium of Advanced Energy Science~Towards the Realization of Zero-Emission Energy~, Sep. 2015
      • The deamination mechanism of APOEC3G required for effective gene mutation in viral genome
        NAGATA Takashi
        神庭 圭佑、永田 崇、片平 正人, Sep. 2015
      • Real-time NMR methods reveals deamination mechanism by human antiviral factor APOBEC3G
        Keisuke Kamba; Takashi Nagata; Masato Katahira
        6th Asia-Pacific NMR Symposium.Hong Kong, Aug. 2015
      • New strategy for high-throughput NMR analysis of biomolecules using the NMR database BMRB and tools for automated NMR analysis, MagRO, FLYA and CYANA
        Naohiro Kobayashi; Masashi Yokochi; Takeshi Iwata; Bikash Ranjan Sahoo; Takashi Nagata; John L. Markley; Eldon L. Ulrich; Elena Schmidt; Peter Güntert; Chojiro Kojima; Toshimichi Fujiwara
        International Society of Magnetic Resonance.Shanghai, Aug. 2015
      • 転写抑制やテロメア短縮を引き起こすTLS/FUSと長鎖非コードRNAおよびDNA間結合の構造基盤
        近藤 敬子; 真嶋 司; 大吉 崇文; 黒川 理樹; 永田 崇; 片平 正人
        RNA meeting 2015.札幌, Jul. 2015
      • AML1タンパク質のDNA結合ドメインに対するRNAアプタマーの特性
        高田 健多; 天野 亮; 田中 陽一郎; 永田 崇; 片平 正人; 中村 義一; 神津 知子; 坂本泰一
        RNA meeting 2015.札幌, Jul. 2015
      • AML1 タンパク質の Runt ドメインに結合する RNA アプタマーの取得と解析
        高田健多; 天野亮; 田中陽一郎; 永田崇; 片平正人; 中村義一; 神津知子; 坂本泰一
        平成27年度日本生化学会関東支部例会, Jun. 2015
      • Development of new methods to compensate distortion of quantitation caused by difference in molecular weight (transverse relaxation time)
        Okamura, H; Nishimura, H; Nagata, T; Kigawa, T; Watanabe, T; Katahira, M
        53rd Ann. Meeting NMR Soc. Japan, 05 Nov. 2014, Peer-reviewed
      • Characterization of RNA aptamer targeting the DNA binding domain of AML1 protein
        Takada, K; Amano, R; Tanaka, Y; Nagata, T; Katahira, M; Nakamura, Y; Kozu, T; Sakamoto, T
        The 41st International Symposium on Nucleic Acids Chemistry, Nov. 2014
      • CCND1転写抑制とテロメア短縮をもたらすTLS/FUSによる非コードRNAとDNA認識機構のNMR法による解明
        近藤敬子; 真嶋司; 山置佑大; 大吉崇文; 黒川理樹; 永田崇; 片平正人
        第37回日本分子生物学会年会.横浜, Nov. 2014
      • Deamination mechanism of an anti-HIV APOBEC3G coupled with sliding on single-stranded DNA as analyzed by real-time NMR monitoring method
        K. Kanba; A. Furukawa; K. Sugase; T. Nagata; M. Katahira
        The 41st International Symposium on Nucleic Acids Chemistry.Fukuoka, Nov. 2014
      • 分子量(横緩和時間)の差に由来する物質定量のゆがみを克服する新しい測定法の開発
        岡村英保; 西村裕志; 永田崇; 木川隆則; 渡辺隆司; 片平正人
        第53回NMR討論会.吹田, Nov. 2014
      • 神経系幹細胞の未分化状態維持と発癌に関わるMusashi1タンパク質の構造基盤
        岩岡諒; 小林直宏; 津田健吾; 今井貴雄; 岡野栄之; 永田崇; 片平正人
        第53回NMR討論会.吹田, Nov. 2014
      • MagRO-NMRView、FLYAによる高度に自動化されたNMRデータ解析
        小林直宏; Bikash Ranjan Sahoo; 永田崇; 服部良一; Elena Schmidt; Peter Güntert; 児嶋長次郎; 藤原敏道
        第53回NMR討論会.吹田, Nov. 2014
      • Creation of novel Tat-binding aptamer and ribozyme whose activities switch on in response to K+ via quadruplex formation
        Y. Yamaoki; T. Mashima; T. Nagata; M. Katahira
        The 41st International Symposium on Nucleic Acids Chemistry.Fukuoka, Nov. 2014
      • 神経系幹細胞の未分化状態維持と発癌に関わるMusashi1タンパク質RBD2の構造機能解析
        岩岡諒; 小林直宏; 津田健吾; 今井貴雄; 岡野栄之; 永田崇; 片平正人
        第37回日本分子生物学会年会.横浜, Nov. 2014
      • 実時間NMR法による抗HIV因子APOBEC3Gのスライディングにカップルした脱アミノ化機構の解析
        神庭圭佑; 永田崇; 片平正人
        第37回日本分子生物学会年会.横浜, Nov. 2014
      • AML1 Runt domainとRNAアプタマーの相互作用のNMR解析
        高田健多; 天野亮; 永田崇; 片平正人; 野村祐介; 田中陽一郎; 中村義一; 神津知子; 坂本泰一
        第37回日本分子生物学会年会.横浜, Nov. 2014
      • Development of new NMR methods for correct quantitation on biomass components
        Okamura, H; Nishimura, H; Nagata, T; KIgawa, T; Watanabe, T; Katahira, M
        5th Int. Symp. Adv. Energy Sci., Kyoto, 01 Oct. 2014
      • NMR study of the Interaction between MDM2 and a Peptide Selected by mRNA Display
        T. Nagata; K. Shirakawa; N. Kobayashi; H. Shiheido; N. Tabata; Y. Sakuma-Yonemura; K. Horisawa; M. Katahira; N. Doi; H. Yanagawa
        Biophysical Society Thematic Meeting Disordered Motifs and Domains in Cell Control.Dublin, Oct. 2014
      • Real-time NMR monitoring of enzymatic reaction of anti-HIV protein, structure of anti-prion RNA aptamer and wood biomass analysis
        Kanba, K; Mashima, T; Okamura, H; Furukawa, A; Sugase, K; Nishimura, H; Watanabe, T; Nagata, T; Katahira, M
        The 5th Japan-Taiwan NMR symposium.Sapporo, Sep. 2014
      • Development of Tat-binding aptamer and ribozyme which switch their activities in response to K+
        Y. Yamaoki; T. Mashima; T. Nagata; M. Katahira
        第52回日本生物物理学会年会.札幌,2014.9.25-27, Sep. 2014
      • Screening for novel aptamer against prion protein and its structural study
        T. Mashima; F. Nishikawa; Y.O. Kamatari; T. Nagata; S. Nishikawa; K. Kuwata; M. Katahira
        第52回日本生物物理学会年会.札幌,2014.9.25-27, Sep. 2014
      • Substrate Recognition and Sliding Properities of an Anti-HIV Factor APOBEC3G analyzed by Real-time NMR Monitoring Strategy
        K. Kamba; T. Nagata; M. Katahira
        第52回日本生物物理学会年会.札幌,2014.9.25-27, Sep. 2014
      • NMR analysis of the interaction between an artificial RNA and a transcription factor
        K. Takada; R. Amano; T. Nagata; M. Katahira; Y. Nomura; Y. Tanaka; Y. Nakamura; T. Kozu; T. Sakamoto
        The 5th International Symposium of Advanced Energy Science -Contribution to Zero-Emission Energy-,Uji, Sep. 2014
      • Functional mechanism of an anti-HIV protein, APOBEC3G, as revealed by real-time NMR monitoring of its enzymatic reaction
        K. Kanba; A. Furukawa; K. Sugase; R. Morishita; T. Nagata; M. Katahira
        XXVIth International Conference on Magnetic Resonance in Biological Systems.Dallas, Aug. 2014
      • PROPERTIES OF RNA APTAMER BINDING TO AML1 RUNT DOMAIN
        R. Amano; Y. Nomura; T. Nagata; N. Kobayashi; Y. Mori; K. Takada; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        XXI ROUND TABLE ON NUCLEOSIDES, NUCLEOTIDES AND NUCLEIC ACIDS CHEMICAL BIOLOGY OF NUCLEIC ACIDS.Poland, Aug. 2014
      • Functional mechanism of anti-HIV protein, APOBEC3G, elucidated by real-time monitoring of enzymatic reaction, and anti-prion activity of an RNA aptamer with its structural basis
        K. Kanba; A. Furukawa; K. Sugase; R. Morishita; T. Nagata; M. Katahira
        The 45th Annual Meeting of Korean Magnetic Resonance Society, Jul. 2014, Invited
      • カリウムイオンを感知して自らの活性をスイッチングするTat捕捉アプタマーおよびリボザイムの創製
        山置佑大; 真嶋司; 永田崇; 片平正人
        第16回日本RNA学会年会.名古屋, Jul. 2014
      • Structural and functional analysis of Musashi, a neural and oncogenic RNA-binding protein
        R. Iwaoka; T. Nagata; T. Imai; H; Okano; M. Katahira
        第16回日本RNA学会年会.名古屋, Jul. 2014
      • AML1タンパク質のRuntドメインに結合するRNAアプタマーの取得と解析
        高田健多; 天野亮; 永田崇; 片平正人; 中村義一; 神津知子; 坂本泰一
        日本生化学会関東支部定例会.水戸, Jun. 2014
      • The structural and energetic basis for the high-potency inhibition of MDM2-p53 interaction by MDM2-binding peptide obtained with IVV method
        T. Nagata; K. Shirakawa; B.R. Sahoo; H. Shiheido; K. Horisawa; M. Katahira; N. Kobayashi; N. Doi; H. Yanagawa
        第14回日本蛋白質科学会年会.横浜, Jun. 2014
      • CCND1転写抑制とテロメア短縮に関与する天然変性蛋白質TLS/FUSによる非コードRNAとDNAの認識機構のNMR法による解明
        近藤敬子; 真嶋司; 大吉崇文; 黒川理樹; 永田崇; 片平正人
        第14回日本蛋白質科学会年会.横浜, Jun. 2014
      • NMRによるAML1 Runtドメインと RNAアプタマーの相互作用の解析
        天野亮; 野村祐介; 永田崇; 小林直宏; 高田健太; 福永淳一; 田中陽一郎; 片平正人; 中村義一; 神津知子; 坂本泰一
        平成26年度 日本分光学会年次講演会、和光、2014.5, May 2014
      • Statistical Thermodynamics for The Molecular Recognition Accompanied by a Global Structural Change of a Molecule
        T. Hayashi; H. Oshima; T. Mashima; T. Nagata; M. Katahira; M. Kinoshita
        Nagoya Symposium on Deplection Forces: Celebrating the 60th Anniversary of the Asakura-Oosawa Theory.Nagoya, Mar. 2014
      • Statistical Thermodynamics for Binding of an RNA Aptamer and a Partial Peptide of a Prion Protein
        T. Hayashi; H. Oshima; T. Mashima; T. Nagata; M. Katahira; M. Kinoshita
        58th Annual Meeting of the Biophysical Society of USA.San Francisco, Feb. 2014
      • 3P032 Substrate Recognition and Sliding Properties of an Anti-HIV Factor APOBEC3G analyzed by Real-time NMR Monitoring Strategy(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
        Kamba Keisuke; Nagata Takashi; Katahira Masato
        Seibutsu Butsuri, 2014
      • 1P121 Search for novel aptamer against prion protein and its structural study(05A. Nucleic acid : Structure & Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
        Mashima Tsukasa; Nishikawa Fumiko; Kamatari Yuji O.; Nagata Takashi; Nishikawa Satoshi; Kuwata Kazuo; Katahira Masato
        Seibutsu Butsuri, 2014
      • 神経系幹細胞の未分化状態維持に関わる Musashi1 タンパク質の機能発現の分子メカニズム
        岩岡諒; 櫻井悠子; 鍵矢悦久; 今井貴雄; 岡野栄之; 永田崇; 片平正人
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • Development of quadruplex hammerhead ribozyme which switches on its ribozyme activity: introduction of quadruplex-forming complementary DNA to repress a basal activity
        Y. Yamaoki; T. Mashima; T. Nagata; M. Katahira
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • 四重鎖構造を形成する核酸の抗プリオン活性
        真嶋司; 西川富美子; 鎌足雄司; 才村正幸; 永田崇; 西川諭; 桑田一夫; 片平正人
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • ヒト抗ウィルス因子 APOBEC3G の基質認識機構及び Vif による APOBEC3G 阻害機構の解明に向けて
        神庭圭佑; 永田崇; 片平正人
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • mRNA ディスプレイ法により選択された高親和性MDM2結合ペプチドMIPに基づくMDM2-p53相互作用阻害剤の開発
        白川貴恵; 永田崇; 小林直弘; 始平堂弘和; 新倉啓介; 片平正人; 堀澤健一; 土居信英; 柳川弘志
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • 転写因子AML1に対して複数の結合部位を持つ高親和性RNAアプタマーの解析
        天野亮; 野村祐介; 永田崇; 森瑶子; 福永淳一; 田中陽一郎; 片平正人; 中村義一; 神津知子; 坂本泰一
        第36回日本分子生物学会年会.神戸, Dec. 2013
      • Dual-quadruplex forming ribozyme distinctly switches on its activity in response to K+
        Y. Yamaoki; T. Mashima; T. Nagata; M. Katahira
        The 40th International Symposium on Nucleic Acids Chemistry 2013.Yokohama, Nov. 2013
      • Origin of the anti-prion activity of quadruplex
        T. Mashima; F. Nishikawa; Y.O. Kamatari; M. Saimura; T. Nagata; S. Nishikawa; K. Kuwata; M. Katahira
        The 40th International Symposium on Nucleic Acids Chemistry 2013.Yokohama, Nov. 2013
      • Structural basis for the inhibition of MDM2:p53 interaction by highly selective MDM2-binding peptide obtained with IVV method
        NAGATA Takashi
        第52回日本核磁気共鳴学会.金沢, Nov. 2013
      • Multi-site binding of high affinity aptamers against AML1 Runt domain
        R. Amano; Y. Nomura; T. Nagata; N. Kobayashi; Y. Mori; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        The 40th International Symposium on Nucleic Acids Chemistry 2013.Yokohama, Nov. 2013
      • Aptamer that exerts anti-prion activity and intelligent ribozyme whose activity awitches in reponse to K+
        M. Katahira; T. Mashima; Y. Yamaoki; T. Nagata; F. Nishikawa; S. Nishikawa; Y. Kamatari; K. Kuwata
        日本生物物理学会第51回年会.京都, Oct. 2013
      • Structual description for the strong binding of the peptide selected by mRNA display to MDM2
        T. Nagata; K. Shirakawa; N. Kobayashi; H. Shiheido; M. Katahira; K. Horisawa; N. Doi; H. Yanagawa
        5th Asia-Pacific NMR Symposium.Brisbane, Oct. 2013
      • Statistical Thermodynamics for Binding of an RNA Aptamer and a Partial Peptide of a Prion Protein
        T. Hayashi; H. Oshima; T. Mashima; T. Nagata; M. Katahira; M. Kinoshita
        日本生物物理学会第51回年会.京都, Oct. 2013
      • NMR analysis of the interaction between an artificial RNA and atranscription factor
        R. Amano; Y. Nomura; T. Nagata; N. Kobayashi; Y. Mori; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        The 4th International Symposium of Advanced Energy Science.Uji, Sep. 2013, Invited
      • Mechanism of high affinity and anti-prion activity of anti-prion aptamer
        T. Mashima; F. Nishikawa; Y.O. Kamatari; H. Fujiwara; M. Saimura; T. Nagata; T. Kodaki; S. Nishikawa; K. Kuwata; M. Katahira
        The 10th Korea-Japan Bilateral Symposium on Biological NMR.Seoul, Jul. 2013
      • カリウムイオンによって活性がスイッチングする四重鎖リボザイムの創製:四重鎖形成相補鎖によるスイッチング性能の向上
        山置佑大; 真嶋司; 永田崇; 片平正人
        第15回日本RNA学会年会.松山, Jul. 2013
      • プリオン蛋白質を標的とするRNAアプタマーの認識メカニズムとその抗プリオン活性
        真嶋司; 西川富美子; 鎌足雄司; 藤原弘道; 遠藤美紗; 永田崇; 小瀧努; 西川諭; 桑田一夫; 片平正人
        第13回 日本蛋白質科学会年会.鳥取, Jun. 2013
      • NMR実時間計測法により抗ウィルス因子APOBEC3Gのシチジン脱アミノ化反応の配列依存性を評価する
        神庭圭佑; 小瀧努; 永田崇; 片平正人
        第13回日本蛋白質科学学会年会.鳥取, Jun. 2013
      • 転写因子AML1を標的としたRNAアプタマーによるDNAの擬態
        天野亮; 野村祐介; 永田崇; 森瑶子; 福永淳一; 田中陽一郎; 片平正人; 中村義一; 神津知子; 坂本泰一
        第8回日本ケミカルバイオロジー学会.東京, Jun. 2013
      • 2P125 Enhancement of a Quadruplex-ribozyme activity in response to K^+: a quadruplex-forming complementary DNA enables accurate switching(05A. Nucleic acid: Structure & Property,Poster)
        Yamaoki Yudai; Mashima Tsukasa; Nagata Takashi; Katahira Masato
        Seibutsu Butsuri, 2013
      • 2P126 Structural basis of anti-prion aptamer and its activity(05A. Nucleic acid: Structure & Property,Poster)
        Mashima Tsukasa; Nishikawa Fumiko; Kamatari Yuji O.; Saimura Masayuki; Nagata Takashi; Nishikawa Satoshi; Kuwata Kazuo; Katahira Masato
        Seibutsu Butsuri, 2013
      • 3SCA-02 Aptamer that exerts anti-prion activity and intelligent ribozyme whose activity switches in response to K^+(3SCA Frontier of functional nucleic acids toward elucidation of biological events and nucleic acid medicine,Symposium)
        Katahira Masato; Mashima Tsukasa; Yamaoki Yuudai; Nagata Takashi; Nishikawa Fumiko; Nishikawa Satoshi; Kamatari Yuji; Kuwata Kazuo
        Seibutsu Butsuri, 2013
      • Anti-prion activity of an RNA aptamer and its structural basis.
        Tsukasa Mashima; Fumiko Nishikawa; Yuji O Kamatari; Hiromichi Fujiwara; Masayuki Saimura; Takashi Nagata; Tsutomu Kodaki; Satoshi Nishikawa; Kazuo Kuwata; Masato Katahira
        Nucleic acids research, Jan. 2013
      • Molecular recognition between an aptamer and IDP that dirupts brain function
        Takashi Nagata
        The 2nd International Symposium of Intrinsically Disordered Proteins,2013.Yokohama, Jan. 2013
      • Creation of Novl Ribozyme whose Activity Switches on in Response to K+ via Quadruples Formation
        Yamaoki, Y; Mashima, T; Sakurai, Y; Hara, Y; Kodaki, T; Nagata, T; Katahira, M
        第35回日本分子生物学会年会.福岡, Dec. 2012
      • NMR Real-time Monitoring of the Deamination Reaction of Human Antiviral Factor APOBEC3G
        K. Kamba; A. Furukawa; T. Kodaki; T. Nagata; M. Katahira
        第35回日本分子生物学会年会.福岡, Dec. 2012
      • Interaction of RNA Aptamer with Prion Protein and Monitoring of Biodegradation of Wood Biomass
        Tsukasa Mashima; Hiroshi Nishimura; Hideyasu Okamura; Fumiko Nishikawa; Yuji O. Kamatari; Takashi Nagata; Satoshi Nishikawa; Kazuo Kuwata; Takashi Watanabe; Masato Katahira
        The 51st Annual Meeting of NMR Society of Japan, Nagoya, 09 Nov. 2012, Peer-reviewed
      • Strctural analysisi of RNA aptamer in complex with prion protein, and its anti-prion activity
        Mashima, T; Nishikawa, F; Kamatari, O. Y; Fujiwara, H; Saimura, M; Nagata, T; Kodaki, T; Nishikawa, S; Kuwata, K; Katahira, M
        The 39th International Symposium on Nucleic Acids Chemistry.Nagoya,2012.11.15-17, Nov. 2012
      • プリオンタンパク質とRNAアプタマーの相互作用及び木質バイオマスの生分解のモニタリング
        真嶋司; 西村裕志; 岡村英保; 西川富美子; 鎌足雄司; 永田崇; 西村諭; 桑田一夫; 渡辺隆司; 片平正人
        第51回NMR討論会.名古屋, Nov. 2012
      • 抗HIV宿主因子 APOBEC3Gの位置依存的デアミネーション反応機構の解明
        Furukawa, A; Sugase, K; Morishita, R; Nagata, T; Ryo, A; Takaori, A; Katahira, M
        日本生物物理学会第50回年会.名古屋, Sep. 2012
      • カリウムイオン依存的な四重鎖構造形成によって活性がオンになるインテリジェントリボザイムの創製
        Yamaoki, Y; Mashima, T; Sakurai, Y; Hara, Y; Nagata, T; Katahira, M
        日本生物物理学会第50回年会.名古屋, Sep. 2012
      • Anti-prion activity and it strucural basis of RNAaptamer, and sliding-direction-dependent deaminase activity of anti-HIV enzyme
        T. Mashima; A. Furukawa; K. Sugase; H. Fujiwara; F. Nishikawa; R. Morishita; A. Ryo; Y. Kamatari; T. Nagata; S. Nishikawa; K. Kuwata; M. Katahira
        XXV international Conference on Magnetic Resonance in Biological Systems,2012.Lyon,2012.8.19-24., Aug. 2012
      • NMR analysis of the interaction between AML1 Runt domain and RNA aptamer
        R. Amano; Y. Nomura; T. Nagata; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        XXV international Conference on Magnetic Resonance in Biological Systems,2012.Lyon,2012.8.19-24., Aug. 2012
      • Elucidation of the location-dependent deamination reaction mechanism of an anti-HIV factor,APOBEC3G
        A. Furukawa; K. Sugase; R. Morishita; A. Ryo; A. akaori; T. Nagata; M. Katahira
        XXV international Conference on Magnetic Resonance in Biological Systems,2012, Aug. 2012
      • Anti-prion activity and its structural basis of RNA aptamer,and sliding-direction-dependent deaminase activity of anti-HIV enzyme
        Mashima.T,Furukawa.A; Sugase.K; Fugiwara.H; Nishikawa.F; Morishita.R,Ryo.A; Kamatari.Y; Nagata.T; Nishikawa.S; Kuwata.K; Katahira.M
        XXV international Conference on Magnetic Resonance in Biolgical Systems. Lyon, 18 Jul. 2012
      • Sequence-specific RNA-recognition mechanism of Musashi1, neural and oncogenic RNA-binding Protein
        Ohyama, T; Nagata, T; Tsuda, K; Kobayashi, N; Imai, T; Okano, H; Yamazaki, T; Katahira, M
        XXV international Conference on Magnetic Resonance in Biolgical Systems. Lyon, 18 Jul. 2012
      • カリウムイオン濃度を感知して活性がオンになるインテリジェントリボザイムの創製
        山置雄大; 真嶋司; 櫻井佑; 原ゆかり; 永田崇; 片平正人
        第14回日本RNA学会年会, 仙台, 2012.7.18-20, Jul. 2012
      • RNAアプタマーの抗プリオン活性とその構造的基礎
        真嶋司; 西川富美子; 鎌足雄司; 藤原弘道; 永田崇; 小瀧努; 西川諭; 桑田一夫; 片平正人
        第14回日本RNA学会年会.仙台, Jul. 2012
      • Sliding-direction-dependent activity of anti-HIV enzyme,and structural basis of anti-prion activity of RNA aptamer
        Furukawa, A; Mashima, T; Sugase, K; Fujiwara, H; Nagata, T; Morishita, R; Ryo, A; Nishikawa, F; Nishikawa, S; Kamatari, KO; Kuwata, K; Katahira, M
        Korea-Japan Bilateral NMR Symposium, 16 Mar. 2012
      • 大型装置の連携利用による有用バイオマス生分解の実時間モニタリングとメカニズムの解明
        西村裕志; 西村裕志; 小澤佑; 永田崇; 小瀧努; 小瀧努; 渡辺隆司; 片平正人; 片平正人
        京都大学生存基盤科学研究ユニット研究成果報告書, Feb. 2012
      • 3PT003 A study on deaminase activity of APOBEC3C by NMR(The 50th Annual Meeting of the Biophysical Society of Japan)
        Iwaoka Ryo; Kitamura Shingo; Kanba Keisuke; Furukawa Ayako; Okamura Hideyasu; Sugiura Wataru; Nagata Takashi; Iwatani Yasumasa; Katahira Masato
        Seibutsu Butsuri, 2012
      • NMR法によるAPOBEC3Gデアミネース活性に関する研究
        Iwaoka; S. Kitamura; K. Kanba; A. Furukawa; H. Okamura; W. Sugiura; T. Nagata; Y. Iwatani; M. Katahira
        日本生物物理学会第50回年会,2012, 2012, Peer-reviewed
      • Development of intelligent ribozyme whose activity switches on in response to K+via quadruplex formation
        Y. Yamaoki; T. Mashima; Y. Sakurai; Y. Hara; T. Nagata; M. Katahira
        The 39th International Symposium on Nucleic Acids Chemistry,2012, 2012, Peer-reviewed
      • MR analysis of the interaction between AML1 Runt domain and RNA aptamer
        R. Amano; Y. Nomura; T. Nagata; J. Fukunaga; Y. Tanaka; M. Katahira; Y. Nakamura; T. Kozu; T. Sakamoto
        XXV international Conference on Magnetic Resonance in Biological Systems,2012, 2012, Peer-reviewed
      • RNAアプタマーとAML1 Runt domainの相互作用解析
        天野亮; 野村祐介; 永田崇; 福永淳一; 田中陽一郎; 片平正人; 中村義一; 神津知子; 坂本泰一
        第14回日本RNA学会年会,仙台,2012.7.18-20, 2012
      • Structural basis for the sequence-specific RNA-recognition mechanism of Musashi 1
        Ohyama, T; Nagata, T; Tsuda, K; Kobayashi, N; Imai, T; Okano, H; Yamazaki, T; Katahira, M
        第34回日本分子生物学会年会.横浜, Dec. 2011
      • Real-time monitoring of the cytidine deamination along single-stranded DNA by an anti-HIV factor, APOBEC3G
        Furukawa, A; Sugase, K; Morishita, R; Nagata, T; Ryo, A; Takaori, A; Katahira, M
        The International Symposium on Nuclear Magnetic Resonance 2011, 15 Nov. 2011
      • r(GGA)4 chimeric ribozyme switches its activity in responseto K+ via quadruplex formation
        Nagata, T; Sakurai, Y; Hara, Y; Mashima, T; Kodaki, T; Katahira, M
        The 38th International Symposium on Nucleic Acid Chemistry, 09 Nov. 2011
      • Quantitative analysis of location- and sequence-dependent deamination by APOBEC3G using real-time NMR spectroscopy
        A. Furukawa; K. Sugase; R. Morishita; T. Nagata; T. Kodaki; A. Takaori-Kondo; A. Ryo; M. Katahira
        日本生物物理学会第49回年会,姫路,2011.9.16-18, Nov. 2011
      • リアルタイムモニタリングによって示されたAPBEC3GによるDNA上の極性を有したスライディングとカップルしたシトシン脱アミノ基反応
        Katahira, M; Furukawa, A; Nagata, T; Takaku, H; Morishita, R; Takaori, A; Ryo, A
        第49回日本生物物理学会年会.姫路, Sep. 2011
      • NMR study of XMRV protease in complex with an inhibitor
        Okamura, H; Matsunaga, T; Furukawa, A; Sato, Y; Iwaoka, R; Nagata, T; Kobayashi, N; Takaori, A; Morishita, R; Ryo, A; Katahira, M
        第49回日本生物物理学会年会.姫路, Sep. 2011
      • MagRO-Assign: a tool for automated sequence specific assignment of chemical shifts for NMR signals of protein backbone
        Kobayashi, N; Furukawa, A; Kitazawa, R; Nagata, T; Kitahara, R; Katahira, M; Fujiwara, T
        EUROMAR2011. Frankfurt, 21 Aug. 2011
      • XMRVプロテアーゼのNMRによる構造解析
        古川亜矢子; 松永智子; 岩岡諒; 永田崇; 小林直弘; 高折晃史; 森下了; 梁明秀; 片平正人
        第11回日本蛋白質科学会年会.大阪, Jun. 2011
      • 1SD-06 Coupling between cytidine-deamination by APOBEC3G and its sliding along DNA with polarity as revealed with real-time monitoring by NMR(1SD Dynamical aspects of proteins by NMR,The 49th Annual Meeting of the Biophysical Society of Japan)
        Katahira Masato; Furukawa Ayako; Nagata Takashi; Takaku Hiroshi; Morishita Ryo; Takaori Akifumi; Ryo Akihide
        Seibutsu Butsuri, 2011
      • NMRによるXMRVプロテアーゼとその阻害剤との複合体の構造生物学的研究
        H. Okamura; T. Matsunaga; A. Furukawa; Y. Sato; R. Iwaoka; T. Nagata; N. Kobayashi; A. Takaori; R. Morishita; A. Ryo; M. Katahira
        日本生物物理学会第49回年会,姫路,2011.9.16-18, 2011, Peer-reviewed
      • Musashi1蛋白質-標的RNA複合体に含まれる新たな核酸塩基認識機構
        大山 貴子; 永田 崇; 今井 貴雄; 岡野 栄之; 山崎俊夫; 片平 正人
        第49回NMR討論会、東京, Dec. 2010
      • RNAアプタマー:プリオンタンパク質部分ペプチド複合体の構造及びA3Gタンパク質のDNA上スライディングの解析
        古川亜矢子; 真嶋司; 岩岡諒; 越田高史; 永田崇; 森下了; 梁明秀; 高折晃史; 西川富美子; 西川諭; 片平正人
        第49回NMR討論会、東京, Dec. 2010
      • Structural and functional analysis of the translational repression complex that plays a key role in differentiation regulation
        Ohyama, T; Nagata, T; Tanaka, S; Iikura, H; Imai, T; Okano, H; Yamazaki, T; Katahira, M
        第33回日本分子生物学会年会、第83回日本生化学会大会合同大会.神戸, Dec. 2010
      • 植物転写因子GT-1がリン酸化によりDNA結合能を上昇させる分子機構の解明
        藤本 なつき; 長崎 祐也; 能登 和明; 村田 純; 平塚 和之; 永田 崇; 片平 正人
        第33回日本分子生物学会年会、第83回日本生化学会大会合同大会.神戸, Dec. 2010
      • RNAi関連因子TRBPの構造生物学的解析
        山下征輔; 永田崇; 川添将仁; 竹本千重; 赤坂領吾; 木川隆則; 滝元宏治; 武藤裕; 脇山素明; 横山茂之
        第33回日本分子生物学会年会、第83回日本生化学会大会合同大会.神戸, Dec. 2010
      • A mechanism for an increase in DNA-binding affinity of the trihelix DNA-binding domain via its phosphorylation
        Nagata, T; Niyada, E; Fujimoto, N; Nagasaki, Y; Noto, K; Miyanoiri, Y; Murata, J; Hiratsuka, K; Katahira, M
        The 37th International Symposium on Nucleic Acids Chemistry, 10 Nov. 2010
      • 抗HIV因子APOBE3Gによる酵素反応のリアルタイムモニタリング
        古川亜矢子; 永田崇; 森下了; 梁明秀; 高折晃史; 片平正人
        平成22年度 日本分光学会年次講演会, Nov. 2010, Peer-reviewed
      • マウスMusashi1による標的RNAの認識
        大山貴子; 永田崇; 今井貴雄; 岡野栄之; 山崎俊夫; 片平正人
        第49回NMR討論会, Nov. 2010, Peer-reviewed
      • 「NMRシグナルを用いた抗ウィルス因子活性のリアルタイムモニタリング
        古川亜矢子; 永田崇; 森下了; 高折晃史; 梁明秀; 片平正人
        第58回日本ウィルス学会学術集会.徳島, Nov. 2010
      • APOBEC3Gが抗HIV活性を発揮する酵素反応のリアルタイムモニタリング
        古川 亜矢子; 永田 崇; 森下 了; 梁 昭秀; 高折 晃史; 片平 正人
        平成22年度日本分光学会.京都, Nov. 2010
      • The real-time monitoring of the enzymatic reaction of an anti-HIV factor APOBEC3G
        Nagata, T; Mashima, T; Iwaoka, R; Sugiyama, R; Takaku, H; Takaori, A; Ryo, A; Katahira, M
        第48回生物物理学会年会.仙台,2010.9.20, Sep. 2010
      • The real-time monitoringof the enzymatic reaction of an anti-HIV factor APOBEC3G
        Furukawa, A; Nagata,T; Morishita, R; Iwaoka, R; Katahira, M
        XXIV International Conference on Magnetic Resonance in Biological Systems, Cairns, 22 Aug. 2010
      • Heat shock protein 70 inhibits HIV-1 Vif-mediated ubiquitination and degradation of Apobec3G
        Ryuichi Sugiyama; Hironori Nishitsuji; Yuichiro Habu; Haruki Naganuma; Hiroshi Koseki; Ayako Furukawa; Takashi Nagata; Masato Katahira; Hiroshi Takaku
        EUROPEAN JOURNAL OF MEDICAL RESEARCH, Aug. 2010
      • Structures of telomere DNA in K+ solution, Musashi in complex with RNA, and wild and mutant (phosphorylation-mimicking) DNA-binding proteins, GT-1
        Ohyama, T; Tsuchibayashi, H; Matsugami, A; Miyanoiri, Y; Niyada, E; Nagata, T; Katahira, M
        XXII International Conference on Magnetic Resonance in Biological System.Cairns,2010.8.22-27, Aug. 2010
      • Real-time monitoring of the enzymatic reaction of APOBEC3G possessing anti-HIV activity, and the structure of the RNA aptamer against prion protein
        Furukawa, A; Mashima, T; Matsugami, A; Nagata. T; Sugiyama, R; Takaku, H; Nishikawa, F; Nishikawa, S; Katahira, M
        International Symposium of Korean Society of Biochemistry and Molecular Biology -Structural Biology and Drug Discovery, Aug. 2010
      • 分化制御の鍵をにぎる翻訳抑制複合体のNMR構造機能解析
        大山 貴子; 永田 崇; 田中 志穂; 飯倉 裕之; 河原 裕憲; 今井 貴雄; 岡野 栄之; 山崎俊夫; 片平 正人
        第12回日本RNA学会年会、東京, Jul. 2010
      • 植物転写因子GT-1のDNA結合活性がリン酸化により増強する分子機構
        永田 崇; 長崎 祐也; 藤本 なつき; 能登 和明; 二矢田 絵美; 宮ノ入 洋平; 村田 純; 平塚 和之; 片平 正人
        第10回日本蛋白質科学会年会.北海道, Jun. 2010
      • HIV遺伝子上でのAPOBEC3Gによるシチジンデアミネーション反応の動作機序
        古川亜矢子; 永田崇; 森下了; 杉山隆一; 高久洋; 高折晃史; 梁明秀; 片平正人
        第10回日本蛋白質科学会年会.北海道, Jun. 2010
      • 1P122 1D1255 The real-time monitoring of the enzymatic reaction of an anti-HIV factor APOBEC3G(Nucleic acid binding proteins,Oral Presentations,The 48th Annual Meeting of the Biophysical Society of Japan)
        Furukawa Ayako; Nagata Takashi; Morishita Ryo; Iwaoka Ryo; Sugiyama Ryuichi; Takaku Hiroshi; Takaori Akifumi; Ryo Akihide; Katahira Masato
        Seibutsu Butsuri, 2010
      • 抗HIV活性を有する天然型APOBEC3Gタンパク質の構造、1本鎖DNAとの相互作用及び酵素反応のリアルタイムモニタリング
        古川 亜矢子; 永田 崇; 杉山 隆一; 高久 洋; 片平 正人
        第32回分子生物学会年会.横浜, Dec. 2009
      • 抗HIV活性を保持するタンパク質APOBEC3Gの酵素反応のリアルタイムモニタリング
        古川 亜矢子; 中居 佑介; 永田 崇; 杉山 隆一; 高久 洋; 片平 正人
        第32回分子生物学会年会.横浜, Dec. 2009
      • 翻訳制御に関わるMusashi1とPABP1の相互作用と立体構造の解析
        飯倉 裕之; 田中 志穂; 樋口 敬介; 河原 裕憲; 今井 貴雄; 岡野 栄之; 永田 崇; 片平 正人
        第32回分子生物学会年会.横浜, Dec. 2009
      • 植物遺伝子の光制御に関連したGT-1タンパク質の構造と相互作用の研究
        藤本 なつき; 長崎 裕也; 能登 和明; 二矢田 絵美; 村田 純; 平塚 和之; 永田 崇; 片平 正人
        第32回分子生物学会年会.横浜, Dec. 2009
      • 酵素反応のリアルタイムモニタリングとアプタマーによるプリオンタンパク質の捕捉機構
        古川亜矢子; 真嶋司; 永田崇; 杉山隆一; 高久洋; 西川富美子; 西川諭; 片平正人
        第48回NMR討論会.九州大学, Nov. 2009
      • Structure, interaction and real-time monitoring of the enzymatic reaction of APOBEC3G which possesses anti-HIV activity
        Furukawa, A; Nagata, T; Sugiyama, R; Takaku, H; Katahira, M
        The 3rd Asia-Pacific NMR Symposium.Korea,2009.10.25-28, Oct. 2009
      • Musashi1,PABP,mRNAが構成する翻訳抑制複合体のNMR構造機能解析
        永田崇; 大山貴子; 杉山孝司; 飯倉裕之; 樋口敬介; 河原裕憲; 今井貴雄; 岡野栄之; 山崎俊夫; 片平正人
        日本RNA学会年会、2009.新潟, Jul. 2009
      • Anti-HIV-1 Activity of A3G is Enhanced by HSP70
        Ryuichi Sugiyama; Yuichiro Habu; Haruki Naganuma; Hiroshi Koseki; Ayako Furukawa; Takashi Nagata; Masato Katahira; Hiroshi Takaku
        ANTIVIRAL RESEARCH, May 2009
      • Molecular Mechanism for the reinforcement of DNA-binding activity of GT-1 via phosphorylation
        永田 崇; 長崎 祐也; 藤本 なつき; 能登 和明; 二矢田 絵美; 宮ノ入 洋平; 村田 純; 平塚 和之; 片平 正人
        第9回日本蛋白質科学会年会.熊本, May 2009
      • HIVの複製を阻害するタンパク質APOBEC3Gの構造、相互作用及び酵素反応のリアルタイムモニタリング
        古川 亜矢子; 永田 崇; 羽生 勇一郎; 杉山 隆一; 林 文晶; 横山 茂之; 高久 洋; 片平 正人
        第9回日本蛋白質科学会年会.熊本, May 2009
      • 熱により不可逆的に解離するPH0470由のSPFHドメイン多量体
        桑原陽太; 雲財悟; 永田崇; 池上貴久; 廣明洋子; 藤吉好則; 廣明秀一
        第9回日本蛋白質科学会年会.熊本, May 2009
      • A simultaneous RNA-binding mode of two RNA-binding domains of Musashi-1 analyzed by paramagnetic effects, PRE, PCS, and RDC
        Takashi Nagata; Takako Ohyama; Ayako Furukawa; Takashi Sugiyama; Tsukasa Mashima; Takao Imai; Hideyuki Okano; Toshio Yamazaki; Masato Katahira
        第46回日本生物物理学会.福岡, Dec. 2008
      • PARNのRRMドメインによるmRNA 5'キャップの認識機構
        永田 崇; 鈴木 咲良; 遠藤 竜太; 白水 美香子; 寺田 貴帆; 井上 真; 木川 隆則; eterGuntert; 小林 直宏; 田仲 昭子; 林崎 良英; 武藤 裕
        第31回日本分子生物学会年会・第82回日本生化学会大会.神戸, Dec. 2008
      • HIVの複製を阻害するタンパク質APOBEC3Gの構造と相互作用の解析
        古川 亜矢子; 永田 崇; 羽生 勇一郎; 杉山 隆一; 林 文晶; 横山 茂之; 高久 洋; 片平 正人
        第31回日本分子生物学会年会・第82回日本生化学会大会.神戸, Dec. 2008
      • Musashiタンパク質とPABPの相互作用の解析
        樋口 敬介; 永田 崇; 河原 裕憲; 今井 貴雄; 岡野 栄之; 片平 正人
        第31回日本分子生物学会年会・第81回日本生化学会大会.神戸, Dec. 2008
      • テロメレースのリクルート及び活性の増強をもたらすUP1-テロメアDNA-テロメアRNAの三者複合体の相互作用の解明
        藤本 なつき; 永田 崇; 高田 祐輔; 前田 忠計; 福田 博政; 中釜 斉; 片平 正人
        第31回日本分子生物学会年会・第81回日本生化学会大会.神戸, Dec. 2008
      • RDC、PRE及びPCSに基づいたMusashi-RNA複合体とプリオンタンパク質に対するRNAアプタマーの構造とダイナミクス
        大山貴子; 松上明正; 古川亜矢子; 真嶋司; 杉山孝司; 今井貴雄; 岡野栄之; 西川富美子; 西川諭; 山崎俊夫; 永田崇; 片平正人
        第47回NMR討論会.筑波大学, Nov. 2008
      • Hsp70のHIV-1感染抑制
        杉山 隆一; 羽生 勇一郎; 長沼 晴樹; 小関 寛; 永田 崇; 古川 亜矢子; 片平 正人; 高久 洋
        第56回ウィルス学会.岡山, Oct. 2008
      • Structural Studies of the RRM:mRNA 5' cap comple
        Nagata, T; Suzuki, S; Endo, R; Shirouzu, M; Terada, T; Inoue, M; Kigawa, T; Guntert, P; Hayashizaki, Y; Muto, Y; Yokoyama, S
        23rd International Conference of Magnetic Resonance in Biological Systems. San Diego, 24 Aug. 2008
      • Structures and interactions of 4’-thioDNA and RNA/DNA-binding proteins
        Ohyama, T; Matsugami, A; Furukawa, A; Mashima, T; Sugiyama, T; Yamazaki, T; Nagata, T; Katahira, M
        23rd International Conference of Magnetic Resonance in Biological Systems. San Diego, 24 Aug. 2008
      • Structural analysis of Musashi-RNA complex with paramagnetic effects
        Ohyama, T; Nagata, T; Furukawa, A; Sugiyama, T; Mashima, T; Yamazaki, T; Katahira, M
        XXIII International Conference on Magnetic Resonance in Biological Systems.San Diego,2008.8.24-29, Aug. 2008
      • Molecular Basis for the reinforcement of the affinity of GT-1 to DNA through phosphorylation
        Takashi Nagata; Kazuaki Noto; Emi Niyada; Youhei Miyanoiri; Jun Murata; Kazuyuki Hiratsuka; Masato Katahira
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • 構造を基盤とした転写修飾にかかわる因子の分子間相互作用解析
        武藤裕; 桑迫香奈子; 何発虎; 鈴木咲良; 津田健吾; 高橋真梨; 永田崇; 党偉栄; 遠藤竜太; 染谷龍彦; 安部千景; 菅野純夫; 林崎良英; 横山茂之
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • hnRNP A1タンパク質のアンフォールド効果及びリクルート効果とテロメア長維持との関連
        永田崇; 高田祐輔; 大柄晶太; 小野朝美; 小野愛美; 福田博政; 中釜斉; 石川冬木; 片平正人
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • HIV感染の防御に関与するAPOBEC3Gの構造機能解析
        古川亜矢子; 水内祐基; 河合文隆; 羽生勇一郎; 杉山隆一; 高久洋; 永田崇; 片平正人
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • ロングレンジの構造情報を利用したMusashiタンパク質と標的RNAとの複合体の構造解析
        大山貴子; 大柄晶太; 宮ノ入洋平; 古川亜矢子; 今井貴雄; 岡野栄之; 永田崇; 片平正人
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • NMRによる超高熱菌Pyrococcus horikoshii由来膜タンパク質PH0470 SPFHドメインの構造機能解析
        桑原陽太; 雲財悟; 永田崇; 横山英志; 松井郁夫; 廣明秀一
        第30回日本分子生物学会年会・第80回日本生化学会大会.横浜, Jul. 2008
      • ロングレンジの距離情報の抽出に基づいたマルチドメインタンパク質Musashiと標的RNAの複合体の構造解析
        大山貴子; 永田崇; 古川亜矢子; 杉山孝司; 真嶋司; 今井貴雄; 岡野栄之; 山崎俊夫; 片平正人
        RNA meeting 2008.札幌, Jul. 2008
      • Mechanisms underlying biological activities of RNA/DNA-binding proteins, examined on the basis of the combination of structure and relaxation analyses
        Takako Ohyama; Ayako Furukawa; Tatsuya Miyoshi; Yusuke Takada; Shota Ogara; Kazuyuki Hiratsuka; Takao Imai; Hideyuki Okano; Hitoshi Nakagama; Takashi Nagata; Masato Katahira
        第46回NMR討論会.北海道, Sep. 2007
      • RNP型RNA/DNA結合ドメインを有するタンパク質、hnRNP A1/DおよびMusashi-1に関するNMRを用いた構造研究
        大山 貴子; 永田 崇; 高田 祐輔; 大柄 晶太; 宮ノ入 洋平; 今井 貴雄; 岡野 栄之; 石川 冬木; 中釜 斉; 片平 正人
        第9回日本RNA学会年会.名古屋, Jul. 2007
      • “The structure of human telomeric DNA and the interactions of hnRNP A1/hnRNP D proteins with telomeric DNA
        Matsugami, A; Ohyama, T; Ono, A; Ono, M; Nagata, T; Katahira, M
        International Workshop on Perspectives on Stable Isotope Aided NMR Methods for Protein Structural Analysis, Osaka, 30 Mar. 2007
      • Structural studies on transcriptional and post-transcriptional gene regulation by NMR
        Takashi Nagata; Takako Ohyama; Kazuaki Noto; Emi Niyada; Youhei Miyanoiri; Takao Imai; Hideyuki Okano; Jun Murata; Kazuyuki Hiratsuka; Masato Katahira
        International Workshop on Perspectives on Stable Isotope Aided NMR Methods for Protein Structural Analysis, Osaka, 30 Mar. 2007
      • Molecular basis of microtubule disassembly mechanism regulated by katanin p60
        Naoko Iwaya; Kouhei Akiyama; Satoru Unzai; Kentaro Tomii; Natsuko Goda; Takashi Nagata; Hidehito Tochio; Masahiro Shirakawa; Hidekazu Hiroaki
        International Workshop on Perspectives on Stable Isotope Aided NMR Methods for Protein Structural Analysis, Osaka, 30 Mar. 2007
      • Structural studies on the neural RNA-binding protein Musashi1 in complex with its cognate RNA by NMR.
        Ohyama, T; Nagata, T; Miyanoiri, Y; Imai, T; Okano, H; Katahira, M
        RNA2006Izu, 03 Dec. 2006
      • 植物遺伝子の光応答に関連したGT-1タンパク質のリン酸化による機能制御の構造基盤
        能登和明; 二矢田絵美; 永田崇; 宮ノ入洋平; 上杉晴一; 村田純; 平塚和之; 片平正人
        分子生物学会2006フォーラム, Dec. 2006
      • hnRNP A1タンパク質のテロメラーゼリクルート効果の構造学的研究
        小野朝美; 大西秀典; 大柄晶太; 永田崇; 上杉晴一; 中釜斉; 福田博政; 片平正人
        分子生物学会2006フォーラム, Dec. 2006
      • ラフト中のコレステロール結合タンパク質Perfringolysin Oの構造解析
        中谷圭一郎; 河合文隆; 永田崇; 上杉晴一; 嶋田由紀子; 岩下淑子; 石井毅; 若松馨; 片平正人
        分子生物学会2006フォーラム, Dec. 2006
      • Structural Biology of Functional RNA and DNA
        MATSUGAMI Akimasa; KOIZUMI Daisuke; OHYAMA Takako; INADA Masashi; TSUCHIBAYASHI Hiroaki; NAGATA Takashi; XU Yan; NOGUCHI Yuuki; SUGIYAMA Hiroshi; UMEHARA Takuya; NISHIKAWA Fumiko; NISHIKAWA Satoshi; KATAHIRA Masato; KATAHIRA Masato; KATAHIRA Masato
        Abstr Annu Meet NMR Soc Jpn, Nov. 2006
      • Structural analysis of Musashi protein complexed with the target RNA
        Ohyama,T; Miyanoiri,Y; Nagata,T; Okano,H; Katahira,M
        第45回NMR討論会.京都, Nov. 2006
      • Musashiタンパク質と標的RNAの複合体の構造解析
        大山貴子; 宮ノ入洋平; 永田崇; 栃尾豪人; 岡野栄之; 片平正人
        第8回日本RNA学会年会.淡路島, Jul. 2006
      • 翻訳を抑制するタンパク質及びRNAに関する構造解析
        松上明正; 小泉大輔; 菊池邦夫; 楳原琢也; 西川冨美子; 西川諭; 大山貴子; 宮ノ入洋平; 永田崇; 栃尾豪人; 岡野栄之; 片平正人
        第8回日本RNA学会年会.淡路島, Jul. 2006
      • 転写因子GT-1タンパク質のリン酸化によるDNA結合能上昇の構造学的基盤-リン酸化をミミックする変異型と天然型の構造比較-
        二矢田絵美; 能登和明; 宮ノ入洋平; 栃尾豪人; 永田崇; 平塚和之; 片平正人
        第6回日本蛋白質科学会年会.京都, Apr. 2006
      • Structures of telomere DNA in K+ solution, Musashi in complex with RNA, and wild and mutant (phosphorylation-mimicking) DNA-binding proteins, GT-1
        Ohyama, T; Tsuchibayashi, H; Matsugami, A; Miyanoiri, Y; Niyada, E; Nagata, T; Katahira, M
        XXII International Conference on Magnetic Resonance in Biological Systems, 2006, Peer-reviewed
      • New approaches to structure determination of Protein/DNA complexes by stable isotope-assisted NMR techniques
        Nagata, T; Werner, M. H
        Cold Spring Harbor Laboratory Meeting on Mechanisms of Eukaryotic Transcription, New York, 2001, 2001
      • Defining the functional motifs for DNA-binding and heterodimerization in AML1/RUNX1: Interactions with DNA, PEBP2b/CBFb and ETS1
        Nagata, T; Werner, M. H
        Cold Spring Harbor Laboratory Meeting on Mechanisms of Eukaryotic Transcription, 2001
      • Defining functional motifs for DNA-binding and heterodimerization for the AML1/RUNX1 transcription factor
        Nagata, T; Werner, M. H
        Keystone Symposia on Frontiers of NMR in Molecular Biology VII, 2001
      • Structure, backbone dynamics and interactions with RNA of RNA-binding domains of hnRNP D0 and Musashi1
        Nagata, T; Matsuda, G; Kanno, R; Kobayashi, H; Saeki, J; Kurihara, Y; Kohno, T; Yanagida, Y; Ishikawa, F; Imai, T; Sakakibara, S; Okano, H; Uesugi, S; Katahira, M
        XVIIIth International Conference on Magnetic Resonance in Biological Systems, 1998
      • Structure of UUAGGG-specific RNA binding protein hnRNP-D and it’s interaction with RNA
        Nagata, T; Kurihara, Y; Kohno, T; Kajira, Y; Ishikawa, F; Katahira, M; Uesugi, S
        The 11th Rinshoken International conference, 1996

      Presentations

      • Analysis of Structure and Dynamics of Oligonucleotides in Living Human Cells
        Takashi Nagata
        Joint conference of ISMAR-APNMR-NMRSJ-SEST 2021, 2021.8.23-27., 26 Aug. 2021
      • NMR analysis of the protein containing intrinsically disordered region
        Takashi Nagata
        蛋白研セミナー 生体系NMR法の最前線 基礎から学ぶ最新 NMR解析法(第一回)ー構造解析の自動化, 06 Nov. 2020, Invited
      • Structural and functional study of the G-quadruplex anti-prion RNA aptamer and in-cell NMR of nucleic acids
        Takashi NAGATA
        International IPR Seminar, Open up a new era of structural biology with advanced NMR study, Osaka Univ., 2019.11.19-20, 19 Nov. 2019, Invited
      • Development of anti-prion RNA aptamers and destruction of the Alzheimer's disease-related complex
        Takashi NAGATA
        The 46th International Symposium on Nucleic Acids Chemistry, The 3rd Annual Meeting of Japan Society of Nucleic Acids Chemistry, Koganei Civic Center (Tokyo), 2019.10.29-31, 31 Oct. 2019
      • 草木バイオマス有効利用と創薬開発に向けた構造生物学的アプローチ
        永田 崇
        第32回京都大学宇治キャンパス産学交流会. 京都大学(宇治) 2019.6.27, 27 Jun. 2019, Invited
      • Evaluation of the structural stability and dynamics of nucleic acids inside the living cells by using in-cell NMR spectroscopy
        Nagata T; Yamaoki Y; Katahira M
        The 18th Annual Meeting of the Protein Society of Japan, 2018.6.26-28, Toki messe (Niigata), 28 Jun. 2018, Invited
      • 機能性核酸の細胞内動的構造解析とDNA変換酵素のスライディングの活写
        永田 崇
        新学術領域「動的構造生命」 平成30年度 第4回 領域会議.ザ・ルイガンズ(福岡) 2018.6.12-14, 12 Jun. 2018, Invited
      • DNA変換酵素のスライディングと核酸の細胞内動的構造のNMRによる研究
        永田 崇
        生物機能化学シンポジウム エネルギー理工学研究所主催エネルギー複合機構研究センター、国際・産学連携支援推進事業支援. 京都大学(宇治)2018.03.26, 26 Mar. 2018, Invited
      • 木材分解酵素の構造機能相関研究~木質バイオマスの有効活用に向けた取り組み~
        永田 崇
        京都大学エネルギー理工学研究所第8回センター談話会、2018.01.05, 05 Jan. 2018
      • 機能性核酸の細胞内動的構造解析とDNA変換酵素のスライディングの活写
        永田 崇
        新学術領域「動的構造生命」 平成29年度 第3回 領域会議.ザ・ルイガンズ(福岡) 2017.6.5-7, 05 Jun. 2017, Invited
      • Structural study of RNA aptamer and peptide that potently perturb the function of intrinsically disordered proteins related to disease
        Takashi NAGATA
        The 5th International Symposium on Drug Discovery and Design by NMR, Riken Yokohama Campus, 2016.8.29-30, 29 Aug. 2016, Invited
      • DNA変換酵素のスライディングと共役した酵素活性機構の動的構造基盤の解明
        永田 崇
        新学術領域 「動的構造生命」 平成28年度 第2回 領域会議.クロスウェーブ幕張(千葉) 2016.4.18-20, 18 Apr. 2016, Invited
      • NMR study of RNA aptamer and peptide selected with mRNA display that inhibit the function of disease-related intrinsically disordered proteins
        Takashi NAGATA
        Takashi Nagata, 29 Jan. 2016, Invited
      • DNA変換酵素のスライディングと共役した酵素活性機構の動的構造基盤の解明
        永田 崇
        新学術領域 「動的構造生命」 平成27年度 第1回 領域会議.ザ・ルイガンズ(福岡) 2015.6.1-3, 01 Jun. 2015, Invited
      • Approaches to the protein structure, interaction, enzymatic activity by NMR
        Takashi NAGATA
        第56回日本生化学会 中国-四国支部例会.島根大学大学会館 (松江), 29 May 2015, Invited
      • 脳の機能を妨害する天然変性蛋白質とそれを標的とするアプタマーの分子認識機構の解明
        永田 崇
        新学術領域「天然変性蛋白質」平成25年度 第4回 領域会議.ひだホテルプラザ(岐阜) 2013.9.3-5, 03 Sep. 2013, Invited
      • 脳の機能を妨害する天然変性蛋白質とそれを標的とするアプタマーの分子認識機構の解明
        永田崇
        新学術領域「天然変性蛋白質」平成24年度 第3回 領域会議.北広島クラッセホテル(北海道)2012.5.30-6.1, 30 May 2012, Invited
      • 酵素活性の実時間追跡と構造解析による抗HIV治療薬の開発型研究
        永田 崇
        第7回先端医科学研究センタープロジェクト報告会.横浜, Jan. 2012, Invited
      • New approaches to structure determination of Protein/DNA complexes by stable isotope-assisted NMR techniques
        Nagata, T; Werner, M. H
        The Rockefeller University, "Tri-Lab" Scientific Exchange, 1999, Invited

      Books and Other Publications

      • Integrated Bio-metal Science
        山置佑大; 永田崇; 片平正人, Contributor, 金属原子によるRNAの立体構造形成とその生理活性スイッチングへの応用, pp198-204
        NTS, 15 Jan. 2021
      • Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
        Yamaoki Y; Nagata T; Sakamoto T; Katahira M, Joint work
        Biophysics and Physicobiology, 13, 164, 2020, 26 May 2020
      • Recent progress of in-cell NMR of nucleic acids in living human cells
        Yamaoki Y; Nagata T; Sakamoto T; Katahira M, Joint work
        Biophysical Reviews, 12, 411, 2020, 06 Mar. 2020
      • ヒト生細胞中における核酸NMRシグナルの初計測
        山置佑大; 永田崇; 片平正人, Joint work
        生物物理誌, Jan. 2019, Not refereed
      • 単独ドメインから成るタンパク質APOBEC3GC端ドメインはストランド間移動する能力を有する~実時間NMR計測法を用いた酵素活性測定の応用
        神庭圭佑; 永田崇; 片平正人, Joint work
        新学術領域「柔らかな分子系」ニュースレター第54号(平成30年2月号), 54, Feb. 2018, Not refereed
      • ヒト生細胞中のDNAおよびRNAのNMRシグナル観測に初めて成功
        山置佑大; 永田崇; 片平正人, Joint work
        新学術領域「柔らかな分子系」ニュースレター第54号(平成30年2月号), 54, Feb. 2018, Not refereed
      • APOBEC3Fの触媒中心近傍アミノ酸残基の役割と、DNA配列・長さ及びpHが脱アミノ化活性に及ぼす影響
        永田 崇; 片平正人, Joint work
        新学術領域「柔らかな分子系」ニュースレター第54号(平成30年2月号), 54, Feb. 2018, Not refereed
      • 随想:杉とオークのバイオマス ~週末版~
        永田 崇, Single work
        京都大学エネルギー理工学研究所ニュースレター第61号(平成28年7月号), 61, 9, Jul. 2016, Not refereed
      • Uniform 13C/15N-labeling of DNA by tandem repeat amplification
        Werner, M. H; Gupta, V; Lambert, L. J; Nagata, T, Joint work
        Methods Enzymol., 338: 283-304, 2001, Not refereed

      Industrial Property Rights

      • 特願2009-072932, Hsp70を有効成分として含有するHIV-1感染症治療剤

      Awards

      • 2000
        The Rockefeller University, The Rockefeller University Presidential Fellowship
      • 2001
        U.S. Department, U.S. Department of Energy Scholarship
      • 2001
        Leukemia Research Foundation, Leukemia Research Foundation Postdoctoral Fellowship Award
      • 2002
        Leukemia Research Foundation, Leukemia Research Foundation Postdoctoral Fellowship Award

      External funds: Kakenhi

      • Elucidation of the principles of formation of the Alzheimer's disease-related complex using nucleotide and peptide tools
        Grant-in-Aid for Scientific Research (C)
        Basic Section 43020:Structural biochemistry-related
        Kyoto University
        永田 崇
        From 01 Apr. 2020, To 31 Mar. 2023, Granted
        アミロイドβ;プリオン;アプタマー;NMR;AFM
      • Development of AFM-based quadruplex DNA detection method using data science technology
        Grant-in-Aid for Scientific Research (C)
        Basic Section 43020:Structural biochemistry-related
        Yokohama National University
        田中 陽一郎
        From 01 Apr. 2020, To 31 Mar. 2023, Granted
        AFM;G-quadruplex;データサイエンス;機械学習;NMR;四重鎖DNA;SPM
      • Mechanism of the formation of a translational repression complex that plays a role in the proliferation of cancer and stem cells and molecular basis of drug discovery
        Grant-in-Aid for Scientific Research (C)
        Kyoto University
        Takashi Nagata
        From 01 Apr. 2017, To 31 Mar. 2020, Project Closed
        Musashi;RNA;NMR;AFM;RNA結合;核酸結合;DNAオリガミ
      • Low-cost degradation of azo dyes using the artifitial multi-domain enzymes immobilized on the sheet.
        Grant-in-Aid for Scientific Research (C)
        Health Sciences University of Hokkaido
        Masataka HORIUCHI
        From 01 Apr. 2017, To 31 Mar. 2020, Project Closed
        アゾレダクターゼ;アゾ色素;タンパク質工学;アフィニティークロマトグラフィー;固定化酵素;カードラン;GRP-tag;ハイブリッド酵素;水質改善;融合タンパク質;プロテインライゲーション;蛋白質;酵素反応;バイオテクノロジー;分子機械;環境技術
      • 機能性核酸の細胞内動的構造解析とDNA変換酵素のスライディングの活写
        Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
        Complex systems
        Kyoto University
        永田 崇
        From 01 Apr. 2017, To 31 Mar. 2019, Granted
        in-cell NMR;AFM;スライディング;APOBEC;核酸;NMR;DNAオリガミ
      • Development of functional RNA whose activity of trapping a protein switches on/off for intra- and extracellular conditions
        Grant-in-Aid for Challenging Exploratory Research
        Kyoto University
        Masato Katahira
        From 01 Apr. 2016, To 31 Mar. 2018, Project Closed
        RNAアプタマー;Tat蛋白質;スイッチング;NMR;4重鎖;カリウムイオン;Tat蛋白質;NMR;4重鎖;機能性核酸;構造変化;FRET;構造遷移;機能性RNA
      • DNA変換酵素のスライディングと共役した酵素活性機構の動的構造基盤の解明
        Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
        Complex systems
        Kyoto University
        永田 崇
        From 01 Apr. 2015, To 31 Mar. 2017, Project Closed
        NMR;APOBEC;実時間計測;脱アミノ化;AFM
      • Universal vaccine against influenza virus
        Grant-in-Aid for Challenging Exploratory Research
        Institute of Physical and Chemical Research
        Hidehiro Fukuyama
        From 01 Apr. 2014, To 31 Mar. 2016, Project Closed
        ワクチン
      • Development of intelligent ribozyme and aptamer whose activities switch on in response to environment
        Grant-in-Aid for Challenging Exploratory Research
        Kyoto University
        Masato Katahira
        From 01 Apr. 2014, To 31 Mar. 2016, Project Closed
        RNA酵素;カリウムイオン;In cell NMR;立体構造;4重鎖;RNAアプタマー;Tatタンパク質;In cell NMR;リボザイム;4重鎖;アプタマー
      • Elucidation of the mechanism by which virus inhibits the function of human anti-virus enzymes and molecular basis of drug discovery
        Grant-in-Aid for Scientific Research (C)
        Kyoto University
        Takashi Nagata
        From 01 Apr. 2014, To 31 Mar. 2017, Project Closed
        Vif;APOBEC;アプタマー;NMR
      • Structural basis of prevention by RNA aptamer of transformation of prion protein and its interaction with Ab
        Grant-in-Aid for Scientific Research (B)
        Kyoto University
        Masato Katahira
        From 01 Apr. 2013, To 31 Mar. 2016, Project Closed
        Ab蛋白質;プリオン蛋白質;RNAアプタマー;機能性核酸;NMR;アミロイドβ;プリオン;機能性RNA;アルツハイマー病;線維化;分子間相互作用;アミロイドβタンパク質;抗プリオン活性;分子認識;プリオンタンパク質;RNAアプタマー;NMR;相互作用;プリオン病
      • 脳の機能を妨害する天然変性蛋白質とそれを標的とするアプタマーの分子認識機構の解明
        Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
        Biological Sciences
        Kyoto University
        永田 崇
        From 01 Apr. 2012, To 31 Mar. 2014, Project Closed
        天然変性蛋白質;アプタマー;プリオン;アミロイド;NMR
      • Towards the molecular basis of the ligand-binding mechanism and drug-discovery of TAM receptor tyrosine kinases
        Grant-in-Aid for Scientific Research (C)
        Kyoto University
        Takashi NAGATA
        From 28 Apr. 2011, To 31 Mar. 2014, Project Closed
        TAM受容体;NMR;糖鎖修飾
      • Structural analysis of A1 protein-telomere-telomerase complex, and development of inhibition of telomerase
        Grant-in-Aid for Scientific Research (B)
        Kyoto University;Yokohama City University
        Masato KATAHIRA
        Project Closed
        テロメア;テロメラーゼ;A1タンパク質;癌;デコイ;生物物理;タンパク質;NMR;分子認識;立体構造;RNA;複合体;テロメレース;DNA
      • Molecular basis for the formation of translational repression complex that regulates stem cell differentiation
        Grant-in-Aid for Scientific Research (C)
        Yokohama City University
        Takashi NAGATA
        Project Closed
        Musashi;翻訳抑制;幹細胞;分化制御;RNA結合タンパク質;NMR;RBD;溶液構造;神経幹細胞
      • 低温地域に特化した持続的グルコース生産システムの創成
        Grant-in-Aid for Scientific Research (C)
        Basic Section 41050:Environmental agriculture-related
        Health Sciences University of Hokkaido
        堀内 正隆
        From 01 Apr. 2022, To 31 Mar. 2026, Granted
        ハイブリッド酵素;グルコース生産;結晶性セルロース;好冷菌;セルラーゼ

      External funds: others

      • 植物ウィルスのRNAiサプレッサー2bに対する阻害剤開発を目指した構造生物学アプローチ
        財団法人横浜学術教育振興財団・研究助成
        From 01 Jun. 2007, To 31 May 2008
        永田 崇
      • ヒト内在性HIV制御因子とHIVアクセサリー蛋白質を標的とした抗HIV薬の創製基盤
        財団法人横浜学術教育振興財団・研究助成
        From 01 Jun. 2010, To 31 May 2011
        永田 崇
      • Innovative designing for therapeutic agonists using single domain antibody(VHH)
        AMED
        From 01 Apr. 2018, To 31 Mar. 2023
        高折晃史
      list
        Last Updated :2022/08/05

        Education

        Teaching subject(s)

        • From 01 Apr. 2022, To 31 Mar. 2023
          Fundamental Energy Science
          3211, Spring, Graduate School of Energy Science, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Essentials of Basic Physical Chemistry
          N359, Spring, Institute for Liberal Arts and Sciences, 2
        • From 01 Apr. 2022, To 31 Mar. 2023
          Structural Energy Bioscience
          3289, Spring, Graduate School of Energy Science, 2
        • From Apr. 2015, To Mar. 2016
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2015, To Mar. 2016
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2016, To Mar. 2017
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目
        • From Apr. 2016, To Mar. 2017
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2016, To Mar. 2017
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2017, To Mar. 2018
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目
        • From Apr. 2017, To Mar. 2018
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2017, To Mar. 2018
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2018, To Mar. 2019
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目
        • From Apr. 2018, To Mar. 2019
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2018, To Mar. 2019
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2019, To Mar. 2020
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目
        • From Apr. 2019, To Mar. 2020
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2019, To Mar. 2020
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2020, To Mar. 2021
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目
        • From Apr. 2020, To Mar. 2021
          Fundamental Energy Science
          Spring, エネルギー科学研究科
        • From Apr. 2020, To Mar. 2021
          Structural Energy Bioscience
          Spring, エネルギー科学研究科
        • From Apr. 2021, To Mar. 2022
          Essentials of Basic Physical Chemistry
          Spring, 全学共通科目

        Student achievements: Awards

        • 平成29年度京都大学エネルギー理工学研究所表彰 学生賞
          万里(博士課程3年生), 京都大学エネルギー理工学研究所, 17 Feb. 2017
        • The Best Student Oral/Poster Award
          万里(博士課程3年), 7th Asia Pacific NMR Symposium, Bangalore, India, 2017.2.16-19, 16 Feb. 2017
        • 第54回日本生物物理学会年会 ポスター賞
          万里(博士課程3年), 第54回日本生物物理学会年会, 25 Nov. 2016
        • ISNAC Outstanding Poster Award in 2016
          山置佑大, The 43rd International Symposium on Nucleic Acids Chemistry, Kumamoto. 2016.9.27-29, 28 Sep. 2016
        • 平成27年度京都大学エネルギー理工学研究所表彰 学生賞
          神庭圭佑, 京都大学エネルギー理工学研究所, 04 Mar. 2016
        • Best Presentation Award
          Meng-I Lin, Ajou-Kyoto Joint Symposium on Energy Science, Swon, Korea, 28 Jan. 2016
        • 第4回全体合宿会議 若手招待講演
          神庭圭佑, 新学術領域研究「理論と実験による柔らかな分子系の機能の科学」, 26 Nov. 2015
        • 第54回NMR討論会 若手ポスター賞・太陽日酸賞
          神庭圭佑, 日本核磁気共鳴学会, 07 Nov. 2015
        • 平成27年度第1回若手研究者渡航費助成金平成27年度第1回若手研究者渡航費助成金
          神庭圭佑, 日本核磁気共鳴学会, 13 Aug. 2015
        • 平成26年度京都大学エネルギー理工学研究所表彰 学生賞
          山置佑大, 京都大学エネルギー理工学研究所, 06 Mar. 2015
        • 若手研究者海外派遣プログラム
          神庭圭佑, 新学術領域研究「理論と実験による柔らかな分子系の機能の科学」, 24 Aug. 2014
        • 第16回日本RNA学会優秀発表賞
          山置佑大, 日本RNA学会, 06 Aug. 2014
        • 優秀ポスター賞
          山置佑大, 第15回若手NMR研究会, 11 Jul. 2014
        • ISNAC Outstanding Poster Award in 2013
          真嶋 司, The 40th International Symposium on Nucleic Acids Chemistry, 15 Nov. 2013
        • 平成24年度京都大学エネルギー理工学研究所表彰 学生賞
          真嶋 司, 京都大学エネルギー理工学研究所, 01 Mar. 2013
        • 第14回日本RNA学会年会優秀発表賞
          真嶋 司, 日本RNA学会, 20 Jul. 2012
        list
          Last Updated :2022/08/05

          Administration

          School management (title, position)

          • From 01 Apr. 2021, To 31 Mar. 2023
            組換えDNA実験安全委員会 委員

          Faculty management (title, position)

          • From 01 Apr. 2022, To 31 Mar. 2024
            環境安全保健機構低温物質管理部門寒剤供給専門小委員会委員
          • From 01 Jan. 2013, To 31 Dec. 2013
            エネルギー理工学研究所講演企画委員会委員
          • From 01 Apr. 2013, To 31 Mar. 2015
            低温物質科学研究センター寒剤供給管理運営委員会
          • From 01 Apr. 2013, To 31 Mar. 2018
            エネルギー理工学研究所産業利用課題選定委員会委員
          • From 01 Apr. 2013, To 31 Mar. 2015
            エネルギー理工学研究所情報セキュリティ委員会委員
          • From 16 May 2013
            エネルギー理工学研究所安全衛生委員会委員
          • From 16 May 2013
            エネルギー理工学研究所将来構想検討委員会委員
          • From 01 Apr. 2014, To 31 Mar. 2015
            エネルギー理工学研究所附属エネルギー複合機構研究センター研究計画委員会委員
          • From 01 Jan. 2015, To 31 Dec. 2015
            エネルギー理工学研究所講演企画委員会委員
          • From 01 Apr. 2015, To 30 Jun. 2016
            低温物質科学研究センター寒剤供給専門委員会
          • From 01 Apr. 2015, To 31 Mar. 2017
            エネルギー理工学研究所中期目標・中期計画WG委員
          • From 01 Jul. 2016, To 31 Mar. 2018
            環境安全保健機構低温物質管理部門寒剤供給専門小委員会
          • From 01 Apr. 2017, To 31 Mar. 2021
            エネルギー理工学研究所エネルギー産業利用推進室
          • From 01 Apr. 2018, To 31 Mar. 2020
            環境安全保健機構低温物質管理部門寒剤供給専門小委員会
          • From 01 Apr. 2018, To 31 Mar. 2020
            エネルギー理工学研究所共同利用・共同研究計画委員会委員
          • From 01 Apr. 2019, To 31 Mar. 2021
            エネルギー理工学研究所研究支援部環境安全管理室
          • From 01 Apr. 2020, To 31 Mar. 2022
            環境安全保健機構低温物質管理部門寒剤供給専門小委員会
          • From 01 Apr. 2020, To 31 Mar. 2021
            エネルギー理工学研究所共同利用・共同研究計画委員会委員
          • From 01 Apr. 2020, To 31 Mar. 2021
            エネルギー理工学研究所附属エネルギー複合機構研究センター研究計画委員会・予算委員会委員
          • From 01 Jan. 2015, To 31 Dec. 2015
            京都大学宇治キャンパス公開2015実行委員会
          • From 01 Apr. 2015, To 31 Mar. 2017
            京都大学宇治地区化学物質管理委員会
          • From 01 Apr. 2017, To 31 Mar. 2018
            京都大学宇治事業場衛生委員会
          • From 01 Apr. 2017, To 31 Mar. 2019
            京都大学宇治地区化学物質管理委員会
          • From 01 Apr. 2017, To 31 Mar. 2018
            宇治地区総合環境安全管理センター運営委員会
          • From 01 Apr. 2019, To 31 Mar. 2021
            京都大学宇治地区化学物質管理委員会
          • From 01 Apr. 2021, To 31 Mar. 2023
            京都大学組換えDNA実験安全委員会 委員
          • From 01 Apr. 2021, To 31 Mar. 2023
            エネルギー理工学研究所研究支援部環境安全管理室
          • From 01 Oct. 2019
            エネルギー理工学研究所情報セキュリティ委員会委員
          • From 01 Apr. 2021
            エネルギー理工学研究所附属エネルギー複合機構研究センター研究計画委員会・予算委員会委員
          list
            Last Updated :2022/08/05

            Academic, Social Contribution

            Committee Memberships

            • From Apr. 2016, To Present
              編集委員, 日本分光学会

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