Basic Information

Faculty

• 農学部

Professional Memberships

• コンビナトリアル・バイオエンジニアリング研究会
• 新資源生物変換研究会
• 酵母研究会
• 生物物理学会
• 酵素工学研究会
• 日本化学会
• 日本分子生物学会
• 日本農芸化学会
• 日本生物工学会
• 日本生化学会

Academic Degree

• 工学修士(京都大学)
• 工学博士(京都大学)

Research History

• From Oct. 2022, To Present

  Kyoto University Institute for Advanced Study, Institute for Integrated Cell-Material Sciences, Specially Appointed Professsor
• From Apr. 2021, To Present

  Kyoto University, Office of Society-Academia Collaboration for Innovation, Specially Appointed Professor
• From Oct. 2003, To Mar. 2021

  Kyoto University, Graduate School of Agriculture, Division of Applied Life Sciences, Professor

Language of Instruction

• English

ID,URL

• J-Global ID

  200901006107958319

researchmap URL

• https://researchmap.jp/read0012780

Research

Research Topics, Overview of the research

• Research Topics

  高次元生命現象の分子レベル解析と生物機能を拡大した細胞分子育種

• Overview of the research

  タンパク質の分子構造と細胞の機能発現の動的相関の基礎解析を行う。また、ゲノム情報を利用して、細胞の潜在的機能の分子発掘と開拓を行っている。分子バイオテクノロジーの高度で先端的な研究により、生命現象を分子レベルで理解するとともに、応用から一歩踏み込んだ実用へと研究を発展させている。

Research Interests

• 海洋バイオテクノロジー
• 生物工学
• ナノ・バイオテクノロジー
• コンビナトリアル・バイオエンジニアリング
• 細胞表層工学
• 分子生物学
• Nano-Biotechnology
• Combinatorial Bioengineering
• Cell Surface Engineering
• Molecular Biology

Research Areas

• Life sciences, Applied biochemistry
• Life sciences, Molecular biology
• Manufacturing technology (mechanical, electrical/electronic, chemical engineering), Applied biofunctional and bioprocess engineering

Papers

• Autonomous ribosome biogenesis in vitro.

  Yuishin Kosaka; Yumi Miyawaki; Megumi Mori; Shunsuke Aburaya; Chisato Nishizawa; Takeshi Chujo; Tatsuya Niwa; Takumi Miyazaki; Takashi Sugita; Mao Fukuyama; Hideki Taguchi; Kazuhito Tomizawa; Kenji Sugase; Mitsuyoshi Ueda; Wataru Aoki

  Nature communications, 08 Jan. 2025, Peer-reviewed

  
• Whole-cell biocatalyst for utilization of chitosan by yeast cell surface engineering of chitosanase

  Danya Isogawa; Kouichi Kuroda; Mitsuyoshi Ueda

  Handbook of Chitosan Research and Applications, Feb. 2011

  
• Adaptive evolution of yeast under heat stress and genetic reconstruction to generate thermotolerant yeast

  Kouichi Kuroda; Mitsuyoshi Ueda

  Origin and Evolution of Biodiversity, 27 Aug. 2018

  
• Application of cell surface engineered yeast for the development of drugs against influenza virus infection

  Junki Yamada; Natsuko Miura; Tomohiro Shigemori; Kouichi Kuroda; Mitsuyoshi Ueda

  Influenza and RNA Viruses: Emergence, Classification and Management, 01 Oct. 2014

  
• Application of peptide barcoding to obtain high-affinity anti-PD-1 nanobodies

  Takumi Miyazaki; Wataru Aoki; Naoki Koike; Toshiko Sato; Mitsuyoshi Ueda

  Journal of Bioscience and Bioengineering, Sep. 2023, Peer-reviewed

  
• Secretion of mitochondrial DNA via exosomes promotes inflammation in Behçet's syndrome.

  Hachiro Konaka; Yasuhiro Kato; Toru Hirano; Kohei Tsujimoto; JeongHoon Park; Taro Koba; Wataru Aoki; Yusei Matsuzaki; Masayasu Taki; Shohei Koyama; Eri Itotagawa; Tatsunori Jo; Takehiro Hirayama; Taro Kawai; Ken J Ishii; Mitsuyoshi Ueda; Shigehiro Yamaguchi; Shizuo Akira; Takayoshi Morita; Yuichi Maeda; Masayuki Nishide; Sumiyuki Nishida; Yoshihito Shima; Masashi Narazaki; Hyota Takamatsu; Atsushi Kumanogoh

  The EMBO journal, 04 Sep. 2023, Peer-reviewed

  
• Pinpoint drug delivery system using hollow bio-nanoparticles

  T Yamada; M Seno; A Kondo; M Ueda; K Tanizawa; S Kuroda

  KOBUNSHI RONBUNSHU, 2004, Peer-reviewed

  
• Evaluation of a library of loxP variants with a wide range of recombination efficiencies by Cre.

  Yamauchi Y; Matsukura H; Motone K; Ueda M; Aoki W

  PloS one, Oct. 2022

  Access this paper :

  
• Enhancement of PET degradation by PET depolymerase with the microbe addition.

  Saito H; Ueda M; Aoki W

  Bioscience, biotechnology, and biochemistry, Sep. 2022

  
• Gene therapy of liver tumors with human liver-specific nanoparticles (vol 14, pg 74, 2007)

  M. Ueda; Y. Iwasaki; T. Yamada; A. Kondo; M. Seno; K. Tanizawa; S. Kuroda; M. Sakamoto; M. Kitajima

  CANCER GENE THERAPY, Apr. 2007

  
• Construction of recombinant Escherichia coli producing nitrogenase-related proteins from Azotobacter vinelandii.

  Yuki Tatemichi; Takeharu Nakahara; Mitsuyoshi Ueda; Kouichi Kuroda

  Bioscience, biotechnology, and biochemistry, 22 Sep. 2021

  
• Foci-forming regions of pyruvate kinase and enolase at the molecular surface incorporate proteins into yeast cytoplasmic metabolic enzymes transiently assembling (META) bodies.

  Ryotaro Utsumi; Yuki Murata; Sayoko Ito-Harashima; Misaki Akai; Natsuko Miura; Kouichi Kuroda; Mitsuyoshi Ueda; Michihiko Kataoka

  PloS one, 2023

  
• Ammonia Production Using Bacteria and Yeast toward a Sustainable Society

  Yukio Watanabe; Wataru Aoki; Mitsuyoshi Ueda

  Bioengineering, 07 Jan. 2023

  
• Improving Precise Genome Editing Using Donor DNA/gRNA Hybrid Duplex Generated by Complementary Bases.

  Wataru Aiba; Takamitsu Amai; Mitsuyoshi Ueda; Kouichi Kuroda

  Biomolecules, 03 Nov. 2022

  
• Progress of Molecular Display Technology Using Saccharomyces cerevisiae to Achieve Sustainable Development Goals

  Seiji Shibasaki; Mitsuyoshi Ueda

  Microorganisms, 03 Jan. 2023

  
• Evaluation of Unconventional Protein Secretion by Saccharomyces cerevisiae and other Fungi

  Miura N; Ueda M

  Cells, Aug. 2018, Peer-reviewed, Invited

  
• Engineered bio-nanocapsules, the selective vector for drug delivery system

  DW Yu; T Fukuda; Tuoya; S Kuroda; K Tanizawa; A Kondo; M Ueda; T Yamada; H Tada; M Seno

  IUBMB LIFE, Jan. 2006, Peer-reviewed

  
• Candida albicans新規抗原タンパク質のスクリーニングと免疫誘導能の評価

  芝崎 誠司; 唐崎 美樹; 青木 航; 植田 充美

  日本生化学会大会プログラム・講演要旨集, Nov. 2021

  
• スーパープロテオーム解析による関節リウマチ発症機構の検討

  武田 裕美子; 北原 奈緒; 森坂 裕信; 芝崎 誠司; 岩崎 剛; 佐野 統; 植田 充美

  日本生物工学会大会講演要旨集, Aug. 2014

  
• Construction of HGF-Displaying Yeast by Cell Surface Engineering.

  Seiji Shibasaki; Yuki Nakatani; Kazuaki Taketani; Miki Karasaki; Kiyoshi Matsui; Mitsuyoshi Ueda; Tsuyoshi Iwasaki

  Microorganisms, 07 Jul. 2022

  
• Development of Artificial System to Induce Chromatin Loosening in Saccharomyces cerevisiae.

  Ryota Yamamoto; Genki Sato; Takamitsu Amai; Mitsuyoshi Ueda; Kouichi Kuroda

  Biomolecules, 18 Aug. 2022

  
• Simultaneous Display of Multiple Kinds of Enzymes on the Yeast Cell Surface for Multistep Reactions.

  Kouichi Kuroda; Mitsuyoshi Ueda

  Methods in molecular biology (Clifton, N.J.), 2022

  
• Generation of Arming Yeasts with Active Proteins and Peptides via Cell Surface Display System: Cell Surface Engineering, Bio-Arming Technology.

  Kouichi Kuroda; Mitsuyoshi Ueda

  Methods in molecular biology (Clifton, N.J.), 2022

  
• Parasitic strategy of the pinewood nematode, Bursaphelenchus xylophilus, revealed by proteome analysis

  Shinya Ryoji; Morisaka Hironobu; Takeuchi Yuko; Kikuchi Taisei; Ueda Mitsuyoshi; Futai Kazuyoshi

  The Japanese Forest Society Congress, 2011

  
• Structural Self-formation of Protein : Role of Propeptide as Intramolecular Chaperone

  KATO Michiko; UEDA Mitsuyoshi

  KAGAKU TO SEIBUTSU, 01 Oct. 2006

  
• Production of Single-Domain Antibodies in Pichia pastoris

  Yusei Matsuzaki; Kaho Kajiwara; Wataru Aoki; Mitsuyoshi Ueda

  Methods in Molecular Biology, 2022

  
• Development of a yeast cell surface display method using the SpyTag/SpyCatcher system

  Kaho Kajiwara; Wataru Aoki; Naoki Koike; Mitsuyoshi Ueda

  Scientific Reports, Dec. 2021

  Access this paper :

  
• Sustainable Biological Ammonia Production towards a Carbon-Free Society

  Yukio Watanabe; Wataru Aoki; Mitsuyoshi Ueda

  Sustainability, 24 Aug. 2021

  Access this paper :

  
• Improved ammonia production from soybean residues by cell surface-displayed l-amino acid oxidase on yeast

  Yukio Watanabe; Wataru Aoki; Mitsuyoshi Ueda

  Bioscience, Biotechnology, and Biochemistry, 24 Mar. 2021

  
• Selected reaction monitoring for the quantification of Escherichia coli ribosomal proteins

  Yuishin Kosaka; Wataru Aoki; Megumi Mori; Shunsuke Aburaya; Yuta Ohtani; Hiroyoshi Minakuchi; Mitsuyoshi Ueda

  PLOS ONE, 14 Dec. 2020

  
• Neuronal subclass-selective proteomic analysis in Caenorhabditis elegans

  Shunsuke Aburaya; Yuji Yamauchi; Takashi Hashimoto; Hiroyoshi Minakuchi; Wataru Aoki; Mitsuyoshi Ueda

  Scientific Reports, Dec. 2020

  Access this paper :

  
• Single cell sampling and analysis by ultra short pulse laser

  Kajiyama Shinichiro; Sakakura Masaaki; Ueda Mitsuyoshi; Itoh Kazuyoshi; Fukui Kiichi

  PROGRESS ON POST-GENOME TECHNOLOGIES, 2007, Peer-reviewed

  
• A critical role of an oxygen-responsive gene for aerobic nitrogenase activity in Azotobacter vinelandii and its application to Escherichia coli.

  Ren Takimoto; Yuki Tatemichi; Wataru Aoki; Yuishin Kosaka; Hiroyoshi Minakuchi; Mitsuyoshi Ueda; Kouichi Kuroda

  Scientific reports, 09 Mar. 2022

  Access this paper :

  
• Nanobody Libraries Using Protein Ligation

  Yuki Takaichi; Kaho Kajiwara; Wataru Aoki; Ueda Mitsuyoshi

  The FASEB Journal, May 2021

  
• Peptide barcoding for multiplex evaluation of affinities of nanobody libraries

  Takumi Miyazaki; Yusei Matsuzaki; Mitsuyoshi Ueda; Wataru Aoki

  The FASEB Journal, May 2021

  
• Development of a Novel Sparse Labeling Method by Machine Learning‐Guided Engineering of Cre‐ lox Recombination

  Yuji Yamauchi; Hidenori Matsukura; Mitsuyoshi Ueda; Wataru Aoki

  The FASEB Journal, May 2021

  
• Selected Reaction Monitoring Method for The Quantification of Escherichia coli Ribosomal Proteins

  Yuishin Kosaka; Megumi Mori; Mitsuyoshi Ueda; Wataru Aoki

  The FASEB Journal, May 2021

  
• Development and improvement of ‘functional neural cellomics’ to elucidate the structure‐function relationships of neural networks of Caenorhabditis elegans

  Yuji Yamauchi; Wataru Aoki; Mitsuyoshi Ueda

  The FASEB Journal, Apr. 2020

  
• Peptide barcoding for high‐throughput functional evaluation of antibodies without immobilization

  Wataru Aoki; Yusei Matsuzaki; Yuta Ohtani; Kaho Kajiwara; Kana Miyamoto; Natsuko Miura; Shunsuke Aburaya; Mitsuyoshi Ueda

  The FASEB Journal, Apr. 2020

  
• Peptide barcoding for one-pot evaluation of sequence-function relationships of nanobodies.

  Yusei Matsuzaki; Wataru Aoki; Takumi Miyazaki; Shunsuke Aburaya; Yuta Ohtani; Kaho Kajiwara; Naoki Koike; Hiroyoshi Minakuchi; Natsuko Miura; Tetsuya Kadonosono; Mitsuyoshi Ueda

  Scientific reports, 02 Nov. 2021

  Access this paper :

  
• Studies on mechanisms in onset of rheumatoid arthritis by proteome analysis using monolithic column

  Morisaka Hironobu; Takeda Yumiko; Shibasaki Seiji; Iwasaki Tsuyoshi; Sano Hajime; Ueda Mitsuyoshi

  Abstracts for Annual Meeting of Japanese Proteomics Society, 2014

  
• A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes

  Makoto Hibi; Dai Fukuda; Chihiro Kenchu; Masutoshi Nojiri; Ryotaro Hara; Michiki Takeuchi; Shunsuke Aburaya; Wataru Aoki; Kimihiko Mizutani; Yoshihiko Yasohara; Mitsuyoshi Ueda; Bunzo Mikami; Satomi Takahashi; Jun Ogawa

  Communications Biology, Dec. 2021

  Access this paper :

  
• Small-scale hypoxic cultures for monitoring the spatial reorganization of glycolytic enzymes in Saccharomyces cerevisiae.

  Yuki Yoshimura; Reina Hirayama; Natsuko Miura; Ryotaro Utsumi; Kouichi Kuroda; Mitsuyoshi Ueda; Michihiko Kataoka

  Cell biology international, 29 Apr. 2021

  
• Development of a mito-CRISPR system for generating mitochondrial DNA-deleted strain in Saccharomyces cerevisiae.

  Takamitsu Amai; Tomoka Tsuji; Mitsuyoshi Ueda; Kouichi Kuroda

  Bioscience, biotechnology, and biochemistry, 24 Mar. 2021

  
• Comparative Secretome and Functional Analyses Reveal Glycoside Hydrolase Family 30 and Cysteine Peptidase as Virulence Determinants in the Pinewood Nematode Bursaphelenchus xylophilus

  Ryoji Shinya; Haru Kirino; Hironobu Morisaka; Yuko Takeuchi-Kaneko; Kazuyoshi Futai; Mitsuyoshi Ueda

  Frontiers in Plant Science, 08 Mar. 2021

  Access this paper :

  
• Identification of a Putative Sensor Protein Involved in Regulation of Vesicle Production by a Hypervesiculating Bacterium, Shewanella vesiculosa HM13

  Fumiaki Yokoyama; Tomoya Imai; Wataru Aoki; Mitsuyoshi Ueda; Jun Kawamoto; Tatsuo Kurihara

  Frontiers in Microbiology, 18 Feb. 2021

  
• CRISPR Nickase-Mediated Base Editing in Yeast.

  Kouichi Kuroda; Mitsuyoshi Ueda

  Methods in molecular biology (Clifton, N.J.), 2021

  
• Efficient ammonia production from food by-products by engineered Escherichia coli.

  Yuki Tatemichi; Kouichi Kuroda; Takeharu Nakahara; Mitsuyoshi Ueda

  AMB Express, 18 Aug. 2020

  
• Molecular characterization of a prolyl endopeptidase from a feather-degrading thermophile Meiothermus ruber H328.

  Fumi Yamamoto; Hironobu Morisaka; Mitsuyoshi Ueda; Kunihiko Watanabe

  Journal of biochemistry, 29 Jun. 2020

  
• Construction of engineered yeast producing ammonia from glutamine and soybean residues (okara).

  Yukio Watanabe; Kouichi Kuroda; Yuki Tatemichi; Takeharu Nakahara; Wataru Aoki; Mitsuyoshi Ueda

  AMB Express, 15 Apr. 2020

  
• Design of novel primer sets for easy detection of Ruegeria species from seawater.

  Ruriko Kitamura; Natsuko Miura; Keiko Okada; Keisuke Motone; Toshiyuki Takagi; Mitsuyoshi Ueda; Michihiko Kataoka

  Bioscience, biotechnology, and biochemistry, Apr. 2020, Peer-reviewed

  
• Evaluation of the yeast surface display system for screening of functional nanobodies

  Kaho Kajiwara; Wataru Aoki; Mitsuyoshi Ueda

  AMB Express, Mar. 2020, Peer-reviewed

  Access this paper :

  
• A Zeaxanthin-Producing Bacterium Isolated from the Algal Phycosphere Protects Coral Endosymbionts from Environmental Stress.

  Keisuke Motone; Toshiyuki Takagi; Shunsuke Aburaya; Natsuko Miura; Wataru Aoki; Mitsuyoshi Ueda

  mBio, 21 Jan. 2020, Peer-reviewed

  Access this paper :

  
• YAP1 mediates survival of ALK-rearranged lung cancer cells treated with alectinib via pro-apoptotic protein regulation

  Takahiro Tsuji; Hiroaki Ozasa; Wataru Aoki; Shunsuke Aburaya; Tomoko Yamamoto Funazo; Koh Furugaki; Yasushi Yoshimura; Masatoshi Yamazoe; Hitomi Ajimizu; Yuto Yasuda; Takashi Nomizo; Hironori Yoshida; Yuichi Sakamori; Hiroaki Wake; Mitsuyoshi Ueda; Young Hak Kim; Toyohiro Hirai

  Nature Communications, 03 Jan. 2020, Peer-reviewed

  Access this paper :

  
• Critical Roles of the Pentose Phosphate Pathway and GLN3 in Isobutanol-Specific Tolerance in Yeast.

  Kuroda K; Hammer SK; Watanabe Y; Montaño López J; Fink GR; Stephanopoulos G; Ueda M; Avalos JL

  Cell systems, Nov. 2019, Peer-reviewed

  
• Domain swapping of complementarity-determining region in nanobodies produced by Pichia pastoris

  Natsuko Miura; Kana Miyamoto; Yuta Ohtani; Kenshi Yaginuma; Shunsuke Aburaya; Yoshinori Kitagawa; Wataru Aoki; Mitsuyoshi Ueda

  AMB Express, Jul. 2019, Peer-reviewed

  Access this paper :

  
• High-throughput identification of peptide agonists against GPCRs by co-culture of mammalian reporter cells and peptide-secreting yeast cells using droplet microfluidics.

  Yaginuma K; Aoki W; Miura N; Ohtani Y; Aburaya S; Kogawa M; Nishikawa Y; Hosokawa M; Takeyama H; Ueda M

  Scientific reports, Jul. 2019, Peer-reviewed

  Access this paper :

  
• Temporal proteome dynamics of Clostridium cellulovorans cultured with major plant cell wall polysaccharides.

  Aburaya S; Aoki W; Kuroda K; Minakuchi H; Ueda M

  BMC microbiology, Jun. 2019, Peer-reviewed

  Access this paper :

  
• Peptide barcoding for establishment of new types of genotype–phenotype linkages

  Kana Miyamoto; Wataru Aoki; Yuta Ohtani; Natsuko Miura; Shunsuke Aburaya; Yusei Matsuzaki; Kaho Kajiwara; Yoshinori Kitagawa; Mitsuyoshi Ueda; Maxim Antopolsky

  PLOS ONE, Apr. 2019, Peer-reviewed

  Access this paper :

  
• Evaluation of meter-long monolithic columns for selected reaction monitoring mass spectrometry

  Yuta Ohtani; Shunsuke Aburaya; Hiroyoshi Minakuchi; Natsuko Miura; Wataru Aoki; Mitsuyoshi Ueda

  Journal of Bioscience and Bioengineering, Apr. 2019, Peer-reviewed

  
• Ruegeria sp. Strains Isolated from the Reef-Building Coral Galaxea fascicularis Inhibit Growth of the Temperature-Dependent Pathogen Vibrio coralliilyticus

  Natsuko Miura; Keisuke Motone; Toshiyuki Takagi; Shunsuke Aburaya; Sho Watanabe; Wataru Aoki; Mitsuyoshi Ueda

  Marine Biotechnology, 08 Sep. 2018, Peer-reviewed

  
• Detection of betacyanin in red-tube spinach (Spinacia oleracea) and its biofortification by strategic hydroponics

  Sho Watanabe; Yuta Ohtani; Wataru Aoki; Yuko Uno; Yasunori Sukekiyo; Seiichi Kubokawa; Mitsuyoshi Ueda; Guangxiao Yang

  PLOS ONE, 07 Sep. 2018, Peer-reviewed

  Access this paper :

  
• Molecular and Physiological Study of Candida albicans by Quantitative Proteome Analysis

  Seiji Shibasaki; Miki Karasaki; Wataru Aoki; Mitsuyoshi Ueda

  Proteomes, Sep. 2018, Peer-reviewed

  
• Small RNAs detected in exosomes derived from the MH7A synovial fibroblast cell line with TNF-α stimulation

  Yosuke Takamura; Wataru Aoki; Atsushi Satomura; Seiji Shibasaki; Mitsuyoshi Ueda; Yun Zheng

  PLOS ONE, 10 Aug. 2018, Peer-reviewed

  Access this paper :

  
• Evaluation of Anti-glycation Activities of Phlorotannins in Human and Bovine Serum Albumin-glyceraldehyde Models

  Shingo Sugiura; Ryosuke Taniguchi; Yoshihiko Nishioka; Ryota Iwase; Reiji Tanaka; Hideo Miyake; Tetsushi Mori; Mitsuyoshi Ueda; Toshiyuki Shibata

  NATURAL PRODUCT COMMUNICATIONS, Aug. 2018

  
• Comparative proteomic analysis of Lithospermum erythrorhizon reveals regulation of a variety of metabolic enzymes leading to comprehensive understanding of the shikonin biosynthetic pathway

  Kojiro Takanashi; Yukimi Nakagawa; Shunsuke Aburaya; Kenta Kaminade; Wataru Aoki; Yuka Saida-Munakata; Akifumi Sugiayama; Mitsuyoshi Ueda; Kazufumi Yazaki

  Plant and Cell Physiology, Aug. 2018, Peer-reviewed

  
• Alectinib Resistance in ALK-rearranged Lung Cancer by Dual Salvage Signaling in a Clinically Paired Resistance Model

  Takahiro Tsuji; Hiroaki Ozasa; Wataru Aoki; Shunsuke Aburaya; Tomoko Funazo; Koh Furugaki; Yasushi Yoshimura; Hitomi Ajimizu; Ryoko Okutani; Yuto Yasuda; Takashi Nomizo; Kiyoshi Uemasu; Koichi Hasegawa; Hironori Yoshida; Yoshitaka Yagi; Hiroki Nagai; Yuichi Sakamori; Mitsuyoshi Ueda; Toyohiro Hirai; Young Hak Kim

  Molecular Cancer Research, Aug. 2018, Peer-reviewed

  
• Protection of Coral Larvae from Thermally Induced Oxidative Stress by Redox Nanoparticles

  Motone Keisuke; Takagi Toshiyuki; Aburaya Shunsuke; Aoki Wataru; Miura Natsuko; Minakuchi Hiroyoshi; Takeyama Haruko; Nagasaki Yukio; Shinzato Chuya; Ueda Mitsuyoshi

  MARINE BIOTECHNOLOGY, Aug. 2018, Peer-reviewed

  
• Cas9ニッカーゼを用いたオフターゲットのない新しいゲノム編集法（CRISPR Nickaseシステム）の開発

  黒田浩一; 植田充美

  化学と生物, Apr. 2018, Peer-reviewed

  
• Protection of Coral Larvae from Thermally Induced Oxidative Stress by Redox Nanoparticles

  Motone, Keisuke; Takagi, Toshiyuki; Aburaya, Shunsuke; Aoki, Wataru; Miura, Natsuko; Minakuchi, Hiroyoshi; Takeyama, Haruko; Nagasaki, Yukio; Shinzato, Chuya; Ueda, Mitsuyoshi

  Marine biotechnology (New York, N.Y.), Apr. 2018, Peer-reviewed

  
• Xylanase B from Clostridium cellulovorans 743B: overexpression, purification, crystallization and X-ray diffraction analysis.

  Nakajima D; Nagano A; Shibata T; Tanaka R; Kuroda K; Ueda M; Miyake H

  Acta crystallographica. Section F, Structural biology communications, Feb. 2018, Peer-reviewed

  
• Apoptosis-derived membrane vesicles drive the cGAS-STING pathway and enhance type I IFN production in systemic lupus erythematosus

  Kato Yasuhiro; Park JeongHoon; Takamatsu Hyota; Konaka Hachirou; Aoki Wataru; Aburaya Syunsuke; Ueda Mitsuyoshi; Nishide Masayuki; Koyama Shohei; Hayama Yoshitomo; Kinehara Yuhei; Hirano Toru; Shima Yoshihito; Narazaki Masashi; Kumanogoh Atsushi

  Annals of the rheumatic diseases, 2018, Peer-reviewed

  
• Metabolite profiling of the fermentation process of "yamahai-ginjo-shikomi" Japanese sake

  Tatsukami Yohei; Morisaka Hironobu; Aburaya Shunsuke; Aoki Wataru; Kohsaka Chihiro; Tani Masafumi; Hirooka Kiyoo; Yamamoto Yoshihiro; Kitaoka Atsushi; Fujiwara Hisashi; Wakai Yoshinori; Ueda Mitsuyoshi

  PloS one, 2018, Peer-reviewed

  Access this paper :

  
• High-throughput evaluation of T7 promoter variants using biased randomization and DNA barcoding

  Komura Ryo; Aoki Wataru; Motone Keisuke; Satomura Atsushi; Ueda Mitsuyoshi

  PloS one, 2018, Peer-reviewed

  
• One-step nanoimprinted hybrid micro-/nano-structure for in situ protein detection of isolated cell array via localized surface plasmon resonance

  R. Ali; W.Espulgar; W.Aoki; S.Jiang; M.Saito; M.Ueda; E.Tamiya

  Jpn. J. Appl. Phys, 2018, Peer-reviewed

  
• Platform construction of molecular breeding for utilization of brown macroalgae.

  Takagi T; Kuroda K; Ueda M

  Journal of bioscience and bioengineering, Jan. 2018, Peer-reviewed

  
• Direct bioethanol production from brown macroalgae by co-culture of two engineered Saccharomyces cerevisiae strains

  Sasaki Yusuke; Takagi Toshiyuki; Motone Keisuke; Shibata Toshiyuki; Kuroda Kouichi; Ueda Mitsuyoshi

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2018, Peer-reviewed

  
• Engineering of global regulators and cell surface properties toward enhancing stress tolerance in Saccharomyces cerevisiae

  Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Dec. 2017, Peer-reviewed

  
• Evaluation of Anti-glycation Activities of Phlorotannins in Human and Bovine Serum Albumin-methylglyoxal Models

  Shingo Sugiura; Yuya Midami; Ryosuke Taniguchi; Reiji Tanaka; Hideo Miyake; Tetsushi Mori; Mitsuyoshi Ueda; Toshiyuki Shibata

  NATURAL PRODUCT COMMUNICATIONS, Nov. 2017

  
• Characterization of the cellulosomal scaffolding protein CbpC from Clostridium cellulovorans 743B

  Daichi Nakajima; Toshiyuki Shibata; Reiji Tanaka; Kouichi Kuroda; Mitsuyoshi Ueda; Hideo Miyake

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Oct. 2017, Peer-reviewed

  
• Aspartic Proteases and Major Cell Wall Components in Candida albicans Trigger the Release of Neutrophil Extracellular Traps

  Marcin Zawrotniak; Oliwia Bochenska; Justyna Karkowska-Kuleta; Karolina Seweryn-Ozog; Wataru Aoki; Mitsuyoshi Ueda; Andrzej Kozik; Maria Rapala-Kozik

  FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, Sep. 2017, Peer-reviewed

  
• Construction of bioengineered yeast platform for direct bioethanol production from alginate and mannitol

  Takagi Toshiyuki; Sasaki Yusuke; Motone Keisuke; Shibata Toshiyuki; Tanaka Reiji; Miyake Hideo; Mori Tetsushi; Kuroda Kouichi; Ueda Mitsuyoshi

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Sep. 2017, Peer-reviewed

  
• Cellomics approach for high-throughput functional annotation of Caenorhabditis elegans neural network

  Wataru Aoki; Hidenori Matsukura; Yuji Yamauchi; Haruki Yokoyama; Koichi Hasegawa; Ryoji Shinya; Mitsuyoshi Ueda

  Aug. 2017, Peer-reviewed

  
• Enhanced Direct Ethanol Production by Cofactor Optimization of Cell Surface-Displayed Xylose Isomerase in Yeast

  Sasaki Yusuke; Takagi Toshiyuki; Motone Keisuke; Kuroda Kouichi; Ueda Mitsuyoshi

  BIOTECHNOLOGY PROGRESS, Jul. 2017, Peer-reviewed

  
• Folate Biofortification in Hydroponically Cultivated Spinach by the Addition of Phenylalanine

  Sho Watanabe; Yuta Ohtani; Yohei Tatsukami; Wataru Aoki; Takashi Amemiya; Yasunori Sukekiyo; Seiichi Kubokawa; Mitsuyoshi Ueda

  JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, Jun. 2017, Peer-reviewed

  
• Development of an Analysis Method for 4-Deoxy-L-erythro-5-hexoseulose Uronic Acid by LC/ESI/MS with Selected Ion Monitoring

  Shibata Toshiyuki; Fujii Reona; Miyake Hideo; Tanaka Reiji; Mori Tetsushi; Takahashi Mami; Takagi Toshiyuki; Yoshikawa Hiroyuki; Kuroda Kouichi; Ueda Mitsuyoshi

  NATURAL PRODUCT COMMUNICATIONS, Jun. 2017, Peer-reviewed

  
• Precise genome-wide base editing by the CRISPR Nickase system in yeast

  Atsushi Satomura; Ryosuke Nishioka; Hitoshi Mori; Kosuke Sato; Kouichi Kuroda; Mitsuyoshi Ueda

  SCIENTIFIC REPORTS, May 2017, Peer-reviewed

  Access this paper :

  
• Synthesis of Recombinant Mouse Crystallin Proteins and in Vitro Measurement of Their Refractivity

  Akiho Furuyama; Chiyuki Matsushima; Takahiro Yokoi; Mitsuyoshi Ueda; Eiichi Tamiya

  ACS BIOMATERIALS SCIENCE & ENGINEERING, Apr. 2017, Peer-reviewed

  
• Ammonia production from amino acid-based biomass-like sources by engineered Escherichia coli

  Yosuke Mikami; Hisanari Yoneda; Yohei Tatsukami; Wataru Aoki; Mitsuyoshi Ueda

  AMB EXPRESS, Apr. 2017, Peer-reviewed

  Access this paper :

  
• Molecular changes in appearance of a cancer cell among normal HEK293T cells

  Jihye Chung; Shunsuke Aburaya; Wataru Aoki; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Mar. 2017, Peer-reviewed

  
• Preparation of an oral vaccine by proteome analysis and molecular display technology

  Seiji Shibasaki; Mitsuyoshi Ueda

  Methods in Molecular Biology, 2017, Peer-reviewed

  
• Definitive screening design enables optimization of LC-ESI-MS/MS parameters in proteomics

  Aburaya Shunsuke; Aoki Wataru; Minakuchi Hiroyoshi; Ueda Mitsuyoshi

  Bioscience, biotechnology, and biochemistry, 2017, Peer-reviewed

  
• Characteristic strategy of assimilation of various saccharides by Clostridium cellulovorans.

  Inamori T; Aburaya S; Morisaka H; Kuroda K; Ueda M

  AMB Express, Dec. 2016, Peer-reviewed

  Access this paper :

  
• Recovery of platinum(0) through the reduction of platinum ions by hydrogenase-displaying yeast.

  Ito R; Kuroda K; Hashimoto H; Ueda M

  AMB Express, Dec. 2016, Peer-reviewed

  Access this paper :

  
• Genome Sequence of Formosa haliotis Strain MA1, a Brown Alga-Degrading Bacterium Isolated from the Gut of Abalone Haliotis gigantea.

  Tanaka R; Mizutani Y; Shibata T; Miyake H; Iehata S; Mori T; Kuroda K; Ueda M

  Genome announcements, Nov. 2016, Peer-reviewed

  
• Temporal fluctuation in the abundance of alginate-degrading bacteria in the gut of abalone Haliotis gigantea over 1year

  Reiji Tanaka; Toshiyuki Shibata; Hideo Miyake; Tetsushi Mori; Yutaka Tamaru; Mitsuyoshi Ueda; Peter Bossier

  AQUACULTURE RESEARCH, Sep. 2016

  
• Direct ethanol fermentation of the algal storage polysaccharide laminarin with an optimized combination of engineered yeasts

  Motone Keisuke; Takagi Toshiyuki; Sasaki Yusuke; Kuroda Kouichi; Ueda Mitsuyoshi

  JOURNAL OF BIOTECHNOLOGY, 10 Aug. 2016, Peer-reviewed

  
• Potentiality of bacterial metagenomes in biorefinery enzyme isolation for brown macroalgae degradation

  Mori Tetsushi; Takahashi Mami; Yamada Yumiko; Shibata Toshiyuki; Takagi Toshiyuki; Tanaka Reiji; Miyake Hideo; Chow Seinen; Kuroda Kouichi; Takeyama Haruko; Ueda Mitsuyoshi

  NEW BIOTECHNOLOGY, 25 Jul. 2016, Peer-reviewed

  
• Platform of direct ethanol production from macroalgae by engineered Saccharomyces cerevisiae

  Motone Keisuke; Takagi Toshiyuki; Sasaki Yusuke; Kuroda Kouichi; Ueda Mitsuyoshi

  NEW BIOTECHNOLOGY, 25 Jul. 2016, Peer-reviewed

  
• Proposed alginate utilization process of the macroalgae-assimilating Saccharophagus degradans 2-40 based on quantitative proteomic analysis

  Takagi Toshiyuki; Morisaka Hironobu; Aburaya Shunsuke; Tatsukami Yohei; Kuroda Kouichi; Ueda Mitsuyoshi

  NEW BIOTECHNOLOGY, 25 Jul. 2016, Peer-reviewed

  
• Ethanol production from hemicellulose using xylose isomerase-displaying yeast

  Sasaki Yusuke; Takagi Toshiyuki; Motone Keisuke; Kuroda Kouichi; Ueda Mitsuyoshi

  NEW BIOTECHNOLOGY, 25 Jul. 2016, Peer-reviewed

  
• Rhizobial gibberellin negatively regulates host nodule number

  Yohei Tatsukami; Mitsuyoshi Ueda; M. Ueda

  Scientific Reports, 16 Jun. 2016, Peer-reviewed

  Access this paper :

  
• Rapid preparation of mutated influenza hemagglutinins for influenza virus pandemic prevention.

  Nishioka R; Satomura A; Yamada J; Kuroda K; Ueda M

  AMB Express, Mar. 2016, Peer-reviewed

  Access this paper :

  
• Reconstruction of thermotolerant yeast by one-point mutation identified through whole-genome analyses of adaptively-evolved strains.

  Satomura A; Miura N; Kuroda K; Ueda M

  Scientific reports, Mar. 2016, Peer-reviewed

  Access this paper :

  
• Cellular and molecular engineering of yeast Saccharomyces cerevisiae for advanced biobutanol production.

  Kuroda K; Ueda M

  FEMS microbiology letters, Feb. 2016, Peer-reviewed

  
• Putative Alginate Assimilation Process of the Marine Bacterium Saccharophagus degradans 2-40 Based on Quantitative Proteomic Analysis.

  Takagi T; Morisaka H; Aburaya S; Tatsukami Y; Kuroda K; Ueda M

  Marine biotechnology (New York, N.Y.), Feb. 2016, Peer-reviewed

  
• Engineered yeast whole-cell biocatalyst for direct degradation of alginate from macroalgae and production of non-commercialized useful monosaccharide from alginate

  Takagi Toshiyuki; Yokoi Takahiro; Shibata Toshiyuki; Morisaka Hironobu; Kuroda Kouichi; Ueda Mitsuyoshi

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Feb. 2016, Peer-reviewed

  
• The action of ten secreted aspartic proteases of pathogenic yeast Candida albicans on major human salivary antimicrobial peptide, histatin 5

  Bochenska Oliwia; Rapala-Kozik Maria; Wolak Natalia; Aoki Wataru; Ueda Mitsuyoshi; Kozik Andrzej

  Acta biochimica Polonica, 2016, Peer-reviewed

  
• Inactivation of α1-proteinase inhibitor by Candida albicans aspartic proteases favors the epithelial and endothelial cell colonization in the presence of neutrophil extracellular traps

  Gogol Mariusz; Ostrowska Dominika; Klaga Kinga; Bochenska Oliwia; Wolak Natalia; Aoki Wataru; Ueda Mitsuyoshi; Kozik Andrzej; Rapala-Kozik Maria

  Acta biochimica Polonica, 2016, Peer-reviewed

  
• A comparative proteomics study of a synovial cell line stimulated with TNF-α

  Shibasaki Seiji; Karasaki Miki; Aburaya Shunsuke; Morisaka Hironobu; Takeda Yumiko; Aoki Wataru; Kitano Sachie; Kitano Masayasu; Ueda Mitsuyoshi; Sano Hajime; Iwasaki Tsuyoshi

  FEBS Open Bio, 2016, Peer-reviewed

  Access this paper :

  
• 酵母の熱適応進化戦略

  里村淳; 黒田浩一; 植田充美

  バイオサイエンスとインダストリー, 2016, Peer-reviewed

  
• Falsirhodobacter sp. alg1 Harbors Single Homologs of Endo and Exo-Type Alginate Lyases Efficient for Alginate Depolymerization.

  Mori T; Takahashi M; Tanaka R; Miyake H; Shibata T; Chow S; Kuroda K; Ueda M; Takeyama H

  PloS one, 2016, Peer-reviewed

  Access this paper :

  
• Formosa haliotis sp. nov., a brown-alga-degrading bacterium isolated from the gut of the abalone Haliotis gigantea.

  Reiji Tanaka; Ilse Cleenwerck; Yukino Mizutani; Shunpei Iehata; Toshiyuki Shibata; Hideo Miyake; Tetsushi Mori; Yutaka Tamaru; Mitsuyoshi Ueda; Peter Bossier; Peter Vandamme

  International journal of systematic and evolutionary microbiology, Dec. 2015

  
• Formosa haliotis sp nov., a brown-alga-degrading bacterium isolated from the gut of the abalone Haliotis gigantea

  Reiji Tanaka; Ilse Cleenwerck; Yukino Mizutani; Shunpei Iehata; Toshiyuki Shibata; Hideo Miyake; Tetsushi Mori; Yutaka Tamaru; Mitsuyoshi Ueda; Peter Bossier; Peter Vandamme

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Dec. 2015

  
• Exoproteome analysis of Clostridium cellulovorans in natural soft-biomass degradation.

  Esaka K; Aburaya S; Morisaka H; Kuroda K; Ueda M

  AMB Express, Dec. 2015, Peer-reviewed

  Access this paper :

  
• Description of the interaction between Candida albicans and macrophages by mixed and quantitative proteome analysis without isolation.

  Kitahara N; Morisaka H; Aoki W; Takeda Y; Shibasaki S; Kuroda K; Ueda M

  AMB Express, Dec. 2015, Peer-reviewed

  Access this paper :

  
• Screening of randomly mutagenized glucagon-like peptide-1 library by using an integrated yeast-mammalian assay system.

  Shigemori T; Kuroda K; Ueda M

  Journal of biotechnology, Sep. 2015, Peer-reviewed

  
• Quantitative time-course proteome analysis of Mesorhizobium loti during nodule maturation.

  Nambu M; Tatsukami Y; Morisaka H; Kuroda K; Ueda M

  Journal of proteomics, Jul. 2015, Peer-reviewed

  
• Activation of the mitochondrial signaling pathway in response to organic solvent stress in yeast.

  Nishida-Aoki N; Mori H; Kuroda K; Ueda M

  Current genetics, May 2015, Peer-reviewed

  
• Evaluation of unconventional protein secretion in Saccharomyces cerevisiae

  Natsuko Miura; Mitsuyoshi Ueda

  Membrane Trafficking: Second Edition, 21 Feb. 2015, Peer-reviewed

  
• Kinin release from human kininogen by 10 aspartic proteases produced by pathogenic yeast Candida albicans

  Kozik Andrzej; Gogol Mariusz; Bochenska Oliwia; Karkowska-Kuleta Justyna; Wolak Natalia; Kamysz Wojciech; Aoki Wataru; Ueda Mitsuyoshi; Faussner Alexander; Rapala-Kozik Maria

  BMC microbiology, 2015, Peer-reviewed

  Access this paper :

  
• Inactivation of the antifungal and immunomodulatory properties of human cathelicidin LL-37 by aspartic proteases produced by the pathogenic yeast Candida albicans

  Rapala-Kozik Maria; Bochenska Oliwia; Zawrotniak Marcin; Wolak Natalia; Trebacz Grzegorz; Gogol Mariusz; Ostrowska Dominika; Aoki Wataru; Ueda Mitsuyoshi; Kozik Andrzej

  Infection and immunity, 2015, Peer-reviewed

  
• Inactivation of human kininogen-derived antimicrobial peptides by secreted aspartic proteases produced by the pathogenic yeast Candida albicans

  Bochenska Oliwia; Rapala-Kozik Maria; Wolak Natalia; Kamysz Wojciech; Grzywacz Daria; Aoki Wataru; Ueda Mitsuyoshi; Kozik Andrzej

  Biological chemistry, 2015, Peer-reviewed

  
• 高効率物質生産に向けた転写因子デザインによるストレス耐性工学

  里村淳; 黒田浩一; 植田充美

  日本生物工学会誌, 2015, Peer-reviewed

  
• Proximity effect among cellulose-degrading enzymes displayed on the Saccharomyces cerevisiae cell surface.

  Bae J; Kuroda K; Ueda M

  Applied and environmental microbiology, Jan. 2015, Peer-reviewed

  
• Enhanced butanol production by eukaryotic Saccharomyces cerevisiae engineered to contain an improved pathway.

  Sakuragi H; Morisaka H; Kuroda K; Ueda M

  Bioscience, biotechnology, and biochemistry, 2015, Peer-reviewed

  
• Generation of a Functionally Distinct Rhizopus oryzae Lipase through Protein Folding Memory.

  Satomura A; Kuroda K; Ueda M

  PloS one, 2015, Peer-reviewed

  Access this paper :

  
• Functional screening system for yeast-secreted peptides acting on G-protein coupled receptors.

  Shigemori T; Kuroda K; Ueda M

  AMB Express, 2015, Peer-reviewed

  Access this paper :

  
• Elucidation of the recognition mechanisms for hemicellulose and pectin in Clostridium cellulovorans using intracellular quantitative proteome analysis.

  Aburaya S; Esaka K; Morisaka H; Kuroda K; Ueda M

  AMB Express, 2015, Peer-reviewed

  Access this paper :

  
• Enzyme Evolution by Yeast Cell Surface Engineering.

  Miura N; Kuroda K; Ueda M

  Methods in molecular biology (Clifton, N.J.), 2015, Peer-reviewed

  
• 合成生物工学の未来展望

  KONDO AKIHIKO; 植田 充美

  生物工学会誌, 2015

  
• Single-cell heterogeneity in suppression of PC12 differentiation by direct microinjection of a differentiation inhibitor, U0126

  Jihye Chung; Natsuko Miura; Akio Ito; Munetaka Sawada; Shigemichi Nishikawa; Kouichi Kuroda; Mitsuyoshi Ueda

  CELL BIOLOGY INTERNATIONAL, Oct. 2014, Peer-reviewed

  
• Activation of signaling pathways related to cell wall integrity and multidrug resistance by organic solvent in Saccharomyces cerevisiae

  Nao Nishida; Dongyu Jing; Kouichi Kuroda; Mitsuyoshi Ueda

  CURRENT GENETICS, Aug. 2014, Peer-reviewed

  
• Draft Genome Sequence of Falsirhodobacter sp. Strain alg1, an Alginate-Degrading Bacterium Isolated from Fermented Brown Algae.

  Mori T; Takahashi M; Tanaka R; Shibata T; Kuroda K; Ueda M; Takeyama H

  Genome announcements, Aug. 2014, Peer-reviewed

  
• Evaluation of chitosan-binding amino acid residues of chitosanase from Paenibacillus fukuinensis

  Danya Isogawa; Hironobu Morisaka; Kouichi Kuroda; Hideo Kusaoke; Hisashi Kimoto; Shin-ichiro Suye; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Jul. 2014, Peer-reviewed

  
• Enhanced adsorption and recovery of uranyl ions by NikR mutant-displaying yeast.

  Kuroda K; Ebisutani K; Iida K; Nishitani T; Ueda M

  Biomolecules, Apr. 2014, Peer-reviewed

  
• Evaluation of Mdh1 Protein as an Antigenic Candidate for a Vaccine against Candidiasis

  Seiji Shibasaki; Wataru Aoki; Takashi Nomura; Miki Karasaki; Tomomitsu Sewaki; Mitsuyoshi Ueda

  BIOCONTROL SCIENCE, Mar. 2014, Peer-reviewed

  
• Cell wall structure suitable for surface display of proteins in Saccharomyces cerevisiae

  Hiroyuki Matsuoka; Kazuya Hashimoto; Aki Saijo; Yuki Takada; Akihiko Kondo; Mitsuyoshi Ueda; Hiroshi Ooshima; Taro Tachibana; Masayuki Azuma

  YEAST, Feb. 2014, Peer-reviewed

  
• A design for the control of apoptosis in genetically modified Saccharomyces cerevisiae

  Nao Nishida; Misa Noguchi; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Feb. 2014, Peer-reviewed

  
• Direct Energy Extraction from Brown Macroalgae-Derived Alginate by Gold Nanoparticles on Functionalized Carbon Nanotubes

  Le Quynh Hoa; Hiroyuki Yoshikawa; Masato Saito; Mitsuyoshi Ueda; Toshiyuki Shibata; Eiichi Tamiya

  CHEMCATCHEM, Jan. 2014, Peer-reviewed

  
• Oral Immunization Against Candidiasis Using Lactobacillus casei Displaying Enolase 1 from Candida albicans

  Shibasaki Seiji; Karasaki Miki; Tafuku Senji; Aoki Wataru; Sewaki Tomomitsu; Ueda Mitsuyoshi

  Scientia pharmaceutica, 2014, Peer-reviewed

  
• Development of Cell Surface Engineering (Bio-arming Technology) for Selective Adsorption and Recycling of Various Metals

  植田 充美; 黒田 浩一

  用水と廃水, Jan. 2014, Peer-reviewed

  
• アーミング酵母による多様なレアメタルの選択的回収

  植田充美; 黒田浩一

  BIO INDUSTRY, 2014, Peer-reviewed

  
• Generation of arming yeasts with active proteins and peptides via cell surface display system: cell surface engineering, bio-arming technology.

  Kuroda K; Ueda M

  Methods in molecular biology (Clifton, N.J.), 2014, Peer-reviewed

  
• Detection of Candida albicans by using a designed fluorescence-quenched peptide

  Wataru Aoki; Nao Kitahara; Aika Fujita; Seiji Shibasaki; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Nov. 2013, Peer-reviewed

  
• Exoproteome Profiles of Clostridium cellulovorans Grown on Various Carbon Sources

  Kazuma Matsui; Jungu Bae; Kohei Esaka; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Nov. 2013, Peer-reviewed

  
• Biodefense-New Stage in the Molecular Controlling of Immune System Foreword

  Seiji Shibasaki; Wataru Aoki; Mitsuyoshi Ueda

  YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, Nov. 2013, Peer-reviewed

  
• Elucidation of potentially virulent factors of Candida albicans during serum adaptation by using quantitative time-course proteomics

  Wataru Aoki; Yohei Tatsukami; Nao Kitahara; Kazuma Matsui; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF PROTEOMICS, Oct. 2013, Peer-reviewed

  
• Secreted aspartic peptidases of Candida albicans liberate bactericidal hemocidins from human hemoglobin

  Oliwia Bochenska; Maria Rapala-Kozik; Natalia Wolak; Grazyna Bras; Andrzej Kozik; Adam Dubin; Wataru Aoki; Mitsuyoshi Ueda; Pawel Mak

  PEPTIDES, Oct. 2013, Peer-reviewed

  
• Development of Surface-Engineered Yeast Cells Displaying Phytochelatin Synthase and Their Application to Cadmium Biosensors by the Combined Use of Pyrene-Excimer Fluorescence

  Hideyuki Matsuura; Yosuke Yamamoto; Misa Muraoka; Kenji Akaishi; Yasuhisa Hori; Kanoko Uemura; Naoki Tsuji; Kazuo Harada; Kazumasa Hirata; Takeshi Bamba; Hitoshi Miyasaka; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Sep. 2013, Peer-reviewed

  
• Acquisition of Thermotolerant Yeast Saccharomyces cerevisiae by Breeding via Stepwise Adaptation

  Atsushi Satomura; Yoshiaki Katsuyama; Natsuko Miura; Kouichi Kuroda; Ayako Tomio; Takeshi Bamba; Eiichiro Fukusaki; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Sep. 2013, Peer-reviewed

  
• Cellulosome complexes: Natural biocatalysts as arming microcompartments of enzymes

  Jungu Bae; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  Journal of Molecular Microbiology and Biotechnology, Aug. 2013, Peer-reviewed

  
• Making headway in understanding pine wilt disease: What do we perceive in the postgenomic era?

  Ryoji Shinya; Hironobu Morisaka; Yuko Takeuchi; Kazuyoshi Futai; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Jul. 2013, Peer-reviewed

  
• Disclosure of the differences of Mesorhizobium loti under the free-living and symbiotic conditions by comparative proteome analysis without bacteroid isolation

  Yohei Tatsukami; Mami Nambu; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  BMC MICROBIOLOGY, Jul. 2013, Peer-reviewed

  
• 包括的転写制御による効率的物質生産に向けたストレス耐性育種

  黒田 浩一; 植田 充美

  生物工学会誌 : seibutsu-kogaku kaishi, 25 Jun. 2013

  
• Secretome Analysis of the Pine Wood Nematode Bursaphelenchus xylophilus Reveals the Tangled Roots of Parasitism and Its Potential for Molecular Mimicry

  Ryoji Shinya; Hironobu Morisaka; Taisei Kikuchi; Yuko Takeuchi; Mitsuyoshi Ueda; Kazuyoshi Futai

  PLOS ONE, Jun. 2013, Peer-reviewed

  
• Effect of sterol composition on the activity of the yeast G-protein-coupled receptor Ste2

  Sanae Morioka; Tomohiro Shigemori; Keisuke Hara; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2013, Peer-reviewed

  
• Mutant firefly luciferases with improved specific activity and dATP discrimination constructed by yeast cell surface engineering

  Tatsuya Fushimi; Natsuko Miura; Hideya Shintani; Hiroyuki Tsunoda; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2013, Peer-reviewed

  
• ABC transporters and cell wall proteins involved in organic solvent tolerance in Saccharomyces cerevisiae

  Nao Nishida; Naoki Ozato; Ken Matsui; Kouichi Kuroda; Mitsuyoshi Ueda

  Journal of Biotechnology, May 2013, Peer-reviewed

  
• Display of Clostridium cellulovorans xylose isomerase on the cell surface of Saccharomyces cerevisiae and its direct application to xylose fermentation

  Miki Ota; Hiroshi Sakuragi; Hironobu Morisaka; Kouichi Kuroda; Hideo Miyake; Yutaka Tamaru; Mitsuyoshi Ueda

  Biotechnology Progress, Apr. 2013, Peer-reviewed

  
• Time-course proteomic profile of Candida albicans during adaptation to a fetal serum

  Wataru Aoki; Tomomi Ueda; Yohei Tatsukami; Nao Kitahara; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  PATHOGENS AND DISEASE, Feb. 2013, Peer-reviewed

  
• Revolutionary protein engineering using molecular display

  M. Ueda

  Protein Engineering: Design, Selection and Applications, 2013, Peer-reviewed

  
• Construction of a convenient system for easily screening inhibitors of mutated influenza virus neuraminidases

  Tomohiro Shigemori; Mitsuru Nagayama; Junki Yamada; Natsuko Miura; Suganya Yongkiettrakul; Kouichi Kuroda; Tohoru Katsuragi; Mitsuyoshi Ueda

  FEBS Open Bio, 2013, Peer-reviewed

  
• Fixation of CO2 in Clostridium cellulovorans analyzed by C-13-isotopomer-based target metabolomics

  Masahiro Shinohara; Hiroshi Sakuragi; Hironobu Morisaka; Hideo Miyake; Yutaka Tamaru; Eiichiro Fukusaki; Kouichi Kuroda; Mitsuyoshi Ueda

  AMB EXPRESS, 2013, Peer-reviewed

  
• Biochemical analysis and application of molecular display technology on Candida albicans for diagnosing and preventing candidiasis

  Seiji Shibasaki; Wataru Aoki; Mitsuyoshi Ueda

  Yakugaku Zasshi, 2013, Peer-reviewed

  
• Characterization of antimicrobial peptides toward the development of novel antibiotics

  Wataru Aoki; Mitsuyoshi Ueda

  Pharmaceuticals, 2013, Peer-reviewed

  
• An oral vaccine against candidiasis generated by a yeast molecular display system

  Shibasaki Seiji; Aoki Wataru; Nomura Takashi; Miyoshi Ayuko; Tafuku Senji; Sewaki Tomomitsu; Ueda Mitsuyoshi

  Pathogens and disease, 2013, Peer-reviewed

  
• Arming technology in yeast －Novel strategy for whole-cell biocatalyst and protein engineering

  Kouichi Kuroda; Mitsuyoshi Ueda

  Biomolecules, 3: 632-650, 2013, Peer-reviewed

  
• Spatial recognition of yeast enolase to alter carbon metabolism under hypoxia

  Natsuko Miura; Masahiro Shinohara; Yohei Tatsukami; Yasuhiro Sato; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  Eukaryot. Cell, 12: 1106-1119, 2013, Peer-reviewed

  Access this paper :

  
• Development of Bio-arming Technology for Selective Adsorption of Various Metals Including Rare Metals : Construction of Arming Microorganisms

  植田 充美; 黒田 浩一

  環境資源工学 : 資源処理技術, 2013

  
• Design of a Novel Antimicrobial Peptide Activated by Virulent Proteases

  Wataru Aoki; Nao Kitahara; Natsuko Miura; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  CHEMICAL BIOLOGY & DRUG DESIGN, Nov. 2012, Peer-reviewed

  
• Next generation of antimicrobial peptides as molecular targeted medicines

  Wataru Aoki; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Oct. 2012, Peer-reviewed

  
• Specific adsorption of tungstate by cell surface display of the newly designed ModE mutant

  Kouichi Kuroda; Takashi Nishitani; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 2012, Peer-reviewed

  
• Tracing Putative Trafficking of the Glycolytic Enzyme Enolase via SNARE-Driven Unconventional Secretion

  Natsuko Miura; Aya Kirino; Satoshi Endo; Hironobu Morisaka; Kouichi Kuroda; Masahiro Takagi; Mitsuyoshi Ueda

  EUKARYOTIC CELL, Aug. 2012, Peer-reviewed

  
• Direct fermentation of newspaper after laccase-treatment using yeast codisplaying endoglucanase, cellobiohydrolase, and beta-glucosidase

  Akihito Nakanishi; Kouichi Kuroda; Mitsuyoshi Ueda

  RENEWABLE ENERGY, Aug. 2012, Peer-reviewed

  
• Profiling of adhesive properties of the agglutinin-like sequence (ALS) protein family, a virulent attribute of Candida albicans

  Wataru Aoki; Nao Kitahara; Natsuko Miura; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY, Jun. 2012, Peer-reviewed

  
• Mutated Intramolecular Chaperones Generate High-Activity Isomers of Mature Enzymes

  Mitsuru Nagayama; Haruko Maeda; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOCHEMISTRY, May 2012, Peer-reviewed

  
• Effect of pretreatment of hydrothermally processed rice straw with laccase-displaying yeast on ethanol fermentation

  Akihito Nakanishi; Jun Gu Bae; Kotaro Fukai; Naoki Tokumoto; Kouichi Kuroda; Jun Ogawa; Masato Nakatani; Sakayu Shimizu; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2012, Peer-reviewed

  
• Membrane-displayed peptide ligand activates the pheromone response pathway in Saccharomyces cerevisiae

  Keisuke Hara; Takuya Ono; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOCHEMISTRY, May 2012, Peer-reviewed

  
• Self-assemblies of triskelion A ₂B-type amphiphilic polypeptide showing pH-responsive morphology transformation

  A. Uesaka; M. Ueda; A. Makino; T. Imai; J. Sugiyama; S. Kimura

  Langmuir, 10 Apr. 2012, Peer-reviewed

  
• Chimeric Yeast G-Protein alpha Subunit Harboring a 37-Residue C-Terminal Gustducin-Specific Sequence Is Functional in Saccharomyces cerevisiae

  Keisuke Hara; Yuko Inada; Takuya Ono; Kouichi Kuroda; Yoshimi Yasuda-Kamatani; Masaji Ishiguro; Takaharu Tanaka; Takumi Misaka; Keiko Abe; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Mar. 2012, Peer-reviewed

  
• Two-Dimensional Protein Separation by the HPLC System with a Monolithic Column

  Hironobu Morisaka; Aya Kirino; Kengo Kobayashi; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Mar. 2012, Peer-reviewed

  
• Candida albicans Possesses Sap7 as a Pepstatin A-Insensitive Secreted Aspartic Protease

  Wataru Aoki; Nao Kitahara; Natsuko Miura; Hironobu Morisaka; Yoshihiro Yamamoto; Kouichi Kuroda; Mitsuyoshi Ueda

  PLOS ONE, Feb. 2012, Peer-reviewed

  
• Bio-pretreatment technology for the efficient biorefinery and resistant breeding strategy

  B. Jungu; A. Nakanishi; M. Ueda; K. Kuroda

  Seibutsu-kogaku Kaishi, 2012, Peer-reviewed

  
• Preface to the special edition

  M. Ueda; A. Kondo

  Seibutsu-kogaku Kaishi, 2012, Peer-reviewed

  
• Membrane-displayed somatostatin activates somatostatin receptor subtype-2 heterologously produced in Saccharomyces cerevisiae

  Keisuke Hara; Tomohiro Shigemori; Kouichi Kuroda; Mitsuyoshi Ueda

  AMB EXPRESS, 2012, Peer-reviewed

  
• Construction of a novel selection system for endoglucanases exhibiting carbohydrate-binding modules optimized for biomass using yeast cell-surface engineering

  Akihito Nakanishi; Jungu Bae; Kouichi Kuroda; Mitsuyoshi Ueda

  AMB EXPRESS, 2012, Peer-reviewed

  
• Profile of native cellulosomal proteins of Clostridium cellulovorans adapted to various carbon sources

  Hironobu Morisaka; Kazuma Matsui; Yohei Tatsukami; Kouichi Kuroda; Hideo Miyake; Yutaka Tamaru; Mitsuyoshi Ueda

  AMB EXPRESS, 2012, Peer-reviewed

  
• Identification of Interaction Site of Propeptide toward Mature Carboxypeptidase Y (mCPY) Based on the Similarity between Propeptide and CPY Inhibitor (I-C)

  Mitsuru Nagayama; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Jan. 2012, Peer-reviewed

  
• Comprehensive characterization of secreted aspartic proteases encoded by a virulence gene family in Candida albicans

  Wataru Aoki; Nao Kitahara; Natsuko Miura; Hironobu Morisaka; Yoshihiro Yamamoto; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOCHEMISTRY, Oct. 2011, Peer-reviewed

  
• Putative Role of Cellulosomal Protease Inhibitors in Clostridium cellulovorans Based on Gene Expression and Measurement of Activities

  Hirokazu Meguro; Hironobu Morisaka; Kouichi Kuroda; Hideo Miyake; Yutaka Tamaru; Mitsuyoshi Ueda

  JOURNAL OF BACTERIOLOGY, Oct. 2011, Peer-reviewed

  
• Construction of yeast bioadsorbent by cell surface engineering

  Kouichi Kuroda; Mitsuyoshi Ueda

  Handbook of Metal Biotechnology: Applications for Environmental Conservation and Sustainability, 30 Sep. 2011, Peer-reviewed

  
• ROS Production and Apoptosis Induction by Formation of Gts1p-Mediated Protein Aggregates

  Mitsuaki Sanada; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Aug. 2011, Peer-reviewed

  
• Estimation of Enzyme Kinetic Parameters of Cell Surface-displayed Organophosphorus Hydrolase and Construction of a Biosensing System for Organophosphorus Compounds

  Katsumi Takayama; Shin-ichiro Suye; Yoshikazu Tanaka; Ashok Mulchandani; Kouichi Kuroda; Mitsuyoshi Ueda

  ANALYTICAL SCIENCES, Aug. 2011, Peer-reviewed

  
• Molecular design of the microbial cell surface toward the recovery of metal ions

  Kouichi Kuroda; Mitsuyoshi Ueda

  CURRENT OPINION IN BIOTECHNOLOGY, Jun. 2011, Peer-reviewed

  
• Temperature-triggered fusion of vesicles composed of right-handed and left-handed amphiphilic helical peptides

  M. Ueda; A. Makino; T. Imai; J. Sugiyama; S. Kimura

  Langmuir, 19 Apr. 2011, Peer-reviewed

  
• GTS1 Induction Causes Derepression of Tup1-Cyc8-Repressing Genes and Chromatin Remodeling through the Interaction of Gts1p with Cyc8p

  Mitsuaki Sanada; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Apr. 2011, Peer-reviewed

  Access this paper :

  
• Inhibition of Heat Tolerance and Nuclear Import of Gts1p by Ssa1p and Ssa2p

  Mitsuaki Sanada; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Feb. 2011, Peer-reviewed

  
• Rational design of peptide nanotubes for varying diameters and lengths

  M. Ueda; A. Makino; T. Imai; J. Sugiyama; S. Kimura

  Journal of Peptide Science, Feb. 2011, Peer-reviewed

  
• High-throughput screening of improved protease inhibitors using a yeast cell surface display system and a yeast cell chip

  Wataru Aoki; Yuichi Yoshino; Hironobu Morisaka; Keiji Tsunetomo; Hirotaka Koyo; Shinji Kamiya; Noriyuki Kawata; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Jan. 2011, Peer-reviewed

  
• Cell surface engineering of yeast for applications in white biotechnology

  Kouichi Kuroda; Mitsuyoshi Ueda

  BIOTECHNOLOGY LETTERS, Jan. 2011, Peer-reviewed

  
• Cell surface design for selective recovery of rare metal ions

  K. Kuroda; M. Ueda

  Handbook of Metal Biotechnology: Applications for Environmental Conservation and Sustainability, 2011, Peer-reviewed

  
• Molecular Breeding of Advanced Microorganisms for Biofuel Production

  Hiroshi Sakuragi; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY, 2011, Peer-reviewed

  
• Comparison of the mesophilic cellulosome-producing Clostridium cellulovorans genome with other cellulosome-related clostridial genomes

  Yutaka Tamaru; Hideo Miyake; Kouichi Kuroda; Akihito Nakanishi; Chiyuki Matsushima; Roy H. Doi; Mitsuyoshi Ueda

  MICROBIAL BIOTECHNOLOGY, Jan. 2011, Peer-reviewed

  
• Yeast biosorption and recycling of metal ions by cell surface engineering cell surface engineering

  Kouichi Kuroda; Mitsuyoshi Ueda

  Microbial Biosorption of Metals, 2011, Peer-reviewed

  
• CONSTRUCTION OF PROTEOME ANALYSIS SYSTEM WITH ULTRA PERFORMANCE SEPARATION USING LONG MONOLITHIC COLUMN

  Hironobu Morisaka; Mitsuyoshi Ueda

  PROGRESS ON POST-GENOME TECHNOLOGIES AND MODERN NATURAL PRODUCTS, 2011, 2011, Peer-reviewed

  
• QUANTITATIVE INTRODUCTION OF A CELL DIFFERENTIATION INHIBITING AGENT BY THE USE OF AN AUTOMATED MICROINJECTION SYSTEM

  Jihye Chung; Natsuko Miura; Kouichi Kuroda; Mitsuyoshi Ueda

  PROGRESS ON POST-GENOME TECHNOLOGIES AND MODERN NATURAL PRODUCTS, 2011, 2011, Peer-reviewed

  
• MOLECULAR BREEDING OF LUCIFERASE SUITABLE FOR PYROSEQUENCING BY CELL SURFACE ENGINEERING

  Tatsuya Fushimi; Hideya Shintani; Natsuko Miura; Hiroyuki Tsunoda; Kouichi Kuroda; Mitsuyoshi Ueda

  PROGRESS ON POST-GENOME TECHNOLOGIES AND MODERN NATURAL PRODUCTS, 2011, 2011, Peer-reviewed

  
• INVESTIGATION OF THE MOLECULAR BASIS OF MOONLIGHTING PROTEIN, ENOLASE, IN THE POST-GENOME STUDY

  Natsuko Miura; Kazuma Matsui; Satoshi Endo; Hironobu Morisaka; Kouichi Kuroda; Masahiro Takagi; Mitsuyoshi Ueda

  PROGRESS ON POST-GENOME TECHNOLOGIES AND MODERN NATURAL PRODUCTS, 2011, 2011, Peer-reviewed

  
• Enzymatic Properties of Cell Surface-displayed Organophosphorus Hydrolase and the Construction of Biosensing System for Organophosphorus Compounds

  K. Takayama; S. Suye; K. Sawada; Y. Tanaka; A. Mulchandani; K. Kuroda; M. Ueda

  Anal. Sci., 2011, Peer-reviewed

  
• Comparison of the Surface Coat Proteins of the Pine Wood Nematode Appeared During Host Pine Infection and In Vitro Culture by a Proteomic Approach

  Ryoji Shinya; Hironobu Morisaka; Yuko Takeuchi; Mitsuyoshi Ueda; Kazuyoshi Futai

  PHYTOPATHOLOGY, Dec. 2010, Peer-reviewed

  
• The Frontiers of White Biotechnology and the Development of Pharmaceutical Sciences

  Seiji Shibasaki; Mitsuyoshi Ueda

  YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, Nov. 2010, Peer-reviewed

  
• Development of Revolutionary Enzymatic Reactions in Organic Solvents with Molecular Display

  Mitsuyoshi Ueda

  YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, Nov. 2010, Peer-reviewed

  
• バイオリファイナリーに向けたリグニンのバイオ処理技術(<特集>地球環境問題へのバイオテクノロジーの貢献の新時代)

  黒田 浩一; 植田 充美

  生物工学会誌 : seibutsu-kogaku kaishi, 25 Jul. 2010

  
• Yeast co-displaying enhanced green fluorescent protein and organophosphorus hydrolase in combination with a cell chip for detection of organophosphorus compounds

  T. Fukuda; K. Tsuchiyama; H. Makishima; A. Mulchandani; K. Kuroda; M. Ueda; S. Suye

  Biotechnol. J.,, Jul. 2010, Peer-reviewed

  
• 新しい産業革命の渦中にあって(随縁随意)

  植田 充美

  生物工学会誌 : seibutsu-kogaku kaishi, 25 Jun. 2010

  
• ソフトバイオマス完全糖化の新バイオ技術〈ソフトバイオマスを完全分解・糖化する新しい微生物前処理技術〉

  植田充美; 黒田浩一; 三宅英雄; 田丸浩

  配管技術, 01 Jun. 2010

  
• Engineering of microorganisms towards recovery of rare metal ions

  Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2010, Peer-reviewed

  
• バイオマスを完全分解・糖化する革新的微生物前処理技術に向けて

  植田充美; 黒田浩一; 三宅英雄; 田丸浩

  ブレインテクノニュース, 15 May 2010

  
• Enhancement of beta-glucosidase activity on the cell-surface of sake yeast by disruption of SED1

  Atsushi Kotaka; Hiroshi Sahara; Kouichi Kuroda; Akihiko Kondo; Mitsuyoshi Ueda; Yoji Hata

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, May 2010, Peer-reviewed

  
• Organophosphorus compound detection on a cell chip with yeast coexpressing hydrolase and eGFP

  Takeshi Fukuda; Keiji Tsuchiya; Hirokazu Makishima; Kouta Tsuchiyama; Ashok Mulchandani; Kouichi Kuroda; Mitsuyoshi Ueda; Shin-ichiro Suye

  BIOTECHNOLOGY JOURNAL, May 2010, Peer-reviewed

  
• Synthesis of functional dipeptide carnosine from nonprotected amino acids using carnosinase-displaying yeast cells

  Chiaki Inaba; Shinsuke Higuchi; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2010, Peer-reviewed

  
• Improvement in organophosphorus hydrolase activity of cell surface-engineered yeast strain using Flo1p anchor system

  Takeshi Fukuda; Kouta Tsuchiyama; Hirokazu Makishima; Katsumi Takayama; Ashok Mulchandani; Kouichi Kuroda; Mitsuyoshi Ueda; Shin-ichiro Suye

  BIOTECHNOLOGY LETTERS, May 2010, Peer-reviewed

  
• Fatty acid production from butter using novel cutinase-displaying yeast

  Ken Horii; Takashi Adachi; Takanori Tanino; Tsutomu Tanaka; Atsushi Kotaka; Hiroshi Sahara; Tsuneharu Hashimoto; Nobuyuki Kuratani; Seiji Shibasaki; Chiaki Ogino; Hideo Noda; Yoji Hata; Mitsuyoshi Ueda; Akihiko Kondo

  ENZYME AND MICROBIAL TECHNOLOGY, Mar. 2010, Peer-reviewed

  
• Molecular design of yeast cell surface for adsorption and recovery of molybdenum, one of rare metals

  Takashi Nishitani; Mariko Shimada; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Mar. 2010, Peer-reviewed

  
• Genome Sequence of the Cellulosome-Producing Mesophilic Organism Clostridium cellulovorans 743B

  Yutaka Tamaru; Hideo Miyake; Kouichi Kuroda; Akihito Nakanishi; Yujiro Kawade; Kousuke Yamamoto; Masaaki Uemura; Yasuhiro Fujita; Roy H. Doi; Mitsuyoshi Ueda

  JOURNAL OF BACTERIOLOGY, Feb. 2010, Peer-reviewed

  
• Effects of catalytic site mutations on active expression of phage fused penicillin acylase

  Yi-Feng Shi; Patrice Soumillion; Mitsuyoshi Ueda

  JOURNAL OF BIOTECHNOLOGY, Jan. 2010, Peer-reviewed

  
• Development of cell surface engineering (arming technology) in the design of revolutionary whole-cell biocatalyst for lignocellulose utilization

  M. Ueda

  ACS National Meeting Book of Abstracts, 2010, Peer-reviewed

  
• バイオ燃料研究を変革する細胞表層工学

  植田充美

  化学、65(12), 52-54, 2010

  
• 微生物によるコハク酸生産

  杉山祐太郎; 植田充美

  エコバイオリファイナリー（シーエムシー出版）179-192, 2010

  
• シュガー・フェノールプラットフォームの形成

  植田充美

  エコバイオリファイナリー（シーエムシー出版）1-6, 2010

  
• 薬学研究を拓くホワイトバイオテクノロジーの最前線

  芝崎誠司; 植田充美

  薬学雑誌、130(11), 1435-1436, 2010

  
• 地球環境問題へのバイオテクノロジー貢献の新時代

  植田充美

  日本生物工学会学会誌、88(7), 332, 2010

  
• デザインペプチド・タンパク質医薬へのハイスループットな新戦略

  植田充美

  化学工業, 61(4), 249-255, 2010

  
• シングルセル解析の今後の展開

  神原秀記; 松永是; 新垣篤史; 植田充美

  シングルセル解析の最前線（シーエムシー出版）283-286, 2010

  
• 変異タンパク質およびタンパク質ドメインを用いたshort RNAの回収、分離技術

  三浦夏子; 林 絵理; 植田充美

  シングルセル解析の最前線（シーエムシー出版）142-148, 2010

  
• 機能発現タンパク質の網羅的実測定量に向けて

  森坂裕信; 原圭祐; 植田充美

  シングルセル解析の最前線（シーエムシー出版）134-141, 2010

  
• エネルギー：バイオマス

  植田充美; 黒田浩一

  酵素利用技術大系（エヌ・テイー・エス 2010.4.16刊行）867-872, 2010

  
• 酵素の細胞表層デイスプレイーアーミング技術

  植田充美; 黒田浩一

  酵素利用技術大系（エヌ・テイー・エス 2010.4.16刊行）552-559., 2010

  
• 第２世代バイオエタノール（セルロース・バイオエタノール）の効率的生産―CBP法の 展開―

  黒田浩一; 植田充美

  セルロース系バイオエタノール製造技術集成―食糧クライシス回避のためにー （エヌ・テイー・エス）229-241, 2010

  
• Molecular display technologies-development and improvement of powerful solutions in medical, pharmaceutical, and sustainable biotechnology

  Mitsuyoshi Ueda; Seiji Shibasaki

  Recent Patents on Biotechnology, 2010, Peer-reviewed

  
• 分子ディスプレイ法による革新的有機溶媒内酵素反応の開拓

  植田充美

  YAKUGAKU ZASSHI, 2010

  
• Development of yeast molecular display systems focused on therapeutic proteins, enzymes, and foods: Functional analysis of proteins and its application to bioconversion

  Seiji Shibasaki; Mitsuyoshi Ueda

  Recent Patents on Biotechnology, 2010, Peer-reviewed

  
• Comparative genomics of the mesophilic cellulosome-producing Clostridium cellulovorans and its application to biofuel production via consolidated bioprocessing

  Yutaka Tamaru; Hideo Miyake; Kouichi Kuroda; Mitsuyoshi Ueda; Roy H. Doi

  ENVIRONMENTAL TECHNOLOGY, 2010, Peer-reviewed

  
• Evaluation of the Biodegradability of Polyurethane and Its Derivatives by Using Lipase-Displaying Arming Yeast

  Seiji Shibasaki; Al Kawabata; Takanori Tanino; Akihiko Kondo; Mitsuyoshi Ueda; Mamoru Tanaka

  BIOCONTROL SCIENCE, Dec. 2009, Peer-reviewed

  
• Identification of transcription factor endowing yeasts with organic-solvent tolerance and reconstruction of its tolerance

  KURODA Kouichi; UEDA Mitsuyoshi

  Bioscience & industry, 01 Nov. 2009

  
• Characterization of secreted aspartic proteases of Candida albicans

  Wataru Aoki; Nao Kitahara; Hironobu Morisaka; Natsuko Miura; Kouichi Kuroda; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Nov. 2009, Peer-reviewed

  
• Using promoter replacement and selection for loss of heterozygosity to generate an industrially applicable sake yeast strain that homozygously overproduces isoamyl acetate

  Hiroshi Sahara; Atsushi Kotaka; Akihiko Kondo; Mitsuyoshi Ueda; Yoji Hata

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Nov. 2009, Peer-reviewed

  
• Demonstration of catalytic proton acceptor of chitosanase from Paenibacillus fukuinensis by comprehensive analysis of mutant library

  Danya Isogawa; Takeshi Fukuda; Kouichi Kuroda; Hideo Kusaoke; Hisashi Kimoto; Shin-ichiro Suye; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Nov. 2009, Peer-reviewed

  
• Facing Challenges for Drug Discovery Using Molecular Display Technology and Combinatorial Bioengineering Foreword

  Seiji Shibasaki; Mitsuyoshi Ueda

  YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, Nov. 2009, Peer-reviewed

  
• Novel High-Throughput System for Production of New Medicines-Integration and Combination with Molecular Display and Combinatorial Bioengineering

  Mitsuyoshi Ueda

  YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, Nov. 2009, Peer-reviewed

  
• ワイドポアモノリスシリカカラムによるネイティブタンパク質の分離性能評価

  森坂裕信; 桐野彩; 水口博義; 中西和樹; 植田充美

  Chromatography, 31 Oct. 2009, Peer-reviewed

  
• Performance of wide-pore monolithic silica column in protein separation

  Hironobu Morisaka; Kengo Kobayashi; Aya Kirino; Masahiro Furuno; Hiroyoshi Minakuchi; Kazuki Nakanishi; Mitsuyoshi Ueda

  JOURNAL OF SEPARATION SCIENCE, Aug. 2009, Peer-reviewed

  
• Evaluation of cell surface-displayed protein stability against simulated gastric fluid

  Ken Horii; Takashi Adachi; Takanori Tanino; Tsutomu Tanaka; Hiroshi Sahara; Seiji Shibasaki; Chiaki Ogino; Yoji Hata; Mitsuyoshi Ueda; Akihiko Kondo

  BIOTECHNOLOGY LETTERS, Aug. 2009, Peer-reviewed

  
• Improvement of isoflavone aglycones production using beta-glucosidase secretory produced in recombinant Aspergillus oryzae

  Ken Horii; Takashi Adachi; Tetsuya Matsuda; Tsutomu Tanaka; Hiroshi Sahara; Seiji Shibasaki; Chiaki Ogino; Yoji Hata; Mitsuyoshi Ueda; Akihiko Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Aug. 2009, Peer-reviewed

  
• アーミング技術によるメタルバイオテクノロジー--レアメタル資源の選別回収への展開 (特集総説 資源リサイクル社会構築のための環境バイオテクノロジー)

  植田 充美; 黒田 浩一

  環境バイオテクノロジー学会誌, Jul. 2009

  
• Application of Cell-Surface Engineering for Visualization of Yeast in Bread Dough: Development of a Fluorescent Bio-Imaging Technique in the Mixing Process of Dough

  Tatsuro Maeda; Seizaburo Shiraga; Tetsuya Araki; Mitsuyoshi Ueda; Masaharu Yamada; Koji Takeya; Yasuyuki Sagara

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Jul. 2009, Peer-reviewed

  
• Visualization and Quantification of Three-Dimensional Distribution of Yeast in Bread Dough

  Tatsuro Maeda; Gab-Soo Do; Junichi Sugiyama; Tetsuya Araki; Mizuki Tsuta; Seizaburo Shiraga; Mitsuyoshi Ueda; Masaharu Yamada; Koji Takeya; Yasuyuki Sagara

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Jul. 2009, Peer-reviewed

  
• Efficient synthesis of enantiomeric ethyl lactate by Candida antarctica lipase B (CALB)-displaying yeasts

  Chiaki Inaba; Kenjiro Maekawa; Hironobu Morisaka; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2009, Peer-reviewed

  
• Highly efficient synthesis of ethyl hexanoate catalyzed by CALB-displaying Saccharomyces cerevisiae whole-cells in non-aqueous phase

  Shuang-Yan Han; Zhi-You Pan; Deng-Feng Huang; Mitsupshi Ueda; Xiao-Ning Wang; Ying Lin

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jul. 2009, Peer-reviewed

  
• Regulation of the Display Ratio of Enzymes on the Saccharomyces cerevisiae Cell Surface by the Immunoglobulin G and Cellulosomal Enzyme Binding Domains

  Junji Ito; Akihiko Kosugi; Tsutomu Tanaka; Kouichi Kuroda; Seiji Shibasaki; Chiaki Ogino; Mitsuyoshi Ueda; Hideki Fukuda; Roy H. Doi; Akihiko Kondo

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Jun. 2009, Peer-reviewed

  
• Production of ethanol from cassava pulp via fermentation with a surface-engineered yeast strain displaying glucoamylase

  Akihiko Kosugi; Akihiko Kondo; Mitsuyoshi Ueda; Yoshinori Murata; Pilanee Vaithanomsat; Warunee Thanapase; Takamitsu Arai; Yutaka Mori

  RENEWABLE ENERGY, May 2009, Peer-reviewed

  
• Purification of Inactive Precursor of Carboxypeptidase Y Using Selective Cleavage Method Coupled with Molecular Display

  Haruko Maeda; Mitsuru Nagayama; Kouichi Kuroda; Mitsupshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Mar. 2009, Peer-reviewed

  
• Enhancement of display efficiency in yeast display system by vector engineering and gene disruption

  Kouichi Kuroda; Ken Matsui; Shinsuke Higuchi; Atsushi Kotaka; Hiroshi Sahara; Yoji Hata; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Mar. 2009, Peer-reviewed

  
• Cell-surface modification of non-GMO without chemical treatment by novel GMO-coupled and -separated cocultivation method

  Natsuko Miura; Wataru Aoki; Naoki Tokumoto; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Feb. 2009, Peer-reviewed

  
• Efficient generation of recessive traits in diploid sake yeast by targeted gene disruption and loss of heterozygosity

  Atsushi Kotaka; Hiroshi Sahara; Akihiko Kondo; Mitsuyoshi Ueda; Yoji Hata

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Feb. 2009, Peer-reviewed

  
• Creation of a novel peptide endowing yeasts with acid tolerance using yeast cell-surface engineering

  Ken Matsui; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Feb. 2009, Peer-reviewed

  
• Molecular Display Technology Using Yeast-Arming Technology-

  Seiji Shibasaki; Hatsuo Maema; Mitsuyoshi Ueda

  ANALYTICAL SCIENCES, Jan. 2009

  
• Photinus pyralisルシフェラーゼの酵母表層ディスプレイConstruction of luciferase-displaying yeast

  植田充美

  2009年度生物工学会, 2009, Peer-reviewed

  
• リグニンのバイオリファイナリーをめざしたラッカーゼアイソザイムの酵母細胞表層提示Yeast cell surface display of laccase isozymes for lignin biorefinery

  植田充美

  2009年度生物工学会, 2009, Peer-reviewed

  
• 各種有機溶媒耐性に関与するトランスポーターの同定と機能解析Functional analyses of transporters related to organic-solvent tolerance in yeast

  植田充美

  2009年度生物工学会, 2009, Peer-reviewed

  
• モリブデンの選別集積回収をめざした酵母の分子育種Molecular breeding of yeast for selective adsorption and recycling of molybdenum

  植田充美

  2009年度生物工学会, 2009, Peer-reviewed

  
• ラッカーゼの酵母細胞表層提示による新規リグニン分解・前処理系の構築Construction of a novel system for degradation and pretreatment of lignin by yeast cell surface display of laccase

  植田充美

  2009年度生物工学会, 2009, Peer-reviewed

  
• 創薬プロジェクトへの新しいハイスループットシステムー分子デイスプレイとコンビバイオの集積・共役

  植田充美

  薬学雑誌、129(11), 1277-1284, 2009

  
• 分子デイスプレイとコンビバイオによる創薬への挑戦

  芝崎誠司; 植田充美

  薬学雑誌、129(11), 1275-1276, 2009

  
• 植物生育促進への新しい育種法の開発

  植田充美; 石川峻士; 黒田浩一

  第二世代バイオ燃料の開発と応用展開（シーエムシー）, 39-46, 2009

  
• 多様なレアメタル・レアアースを個別に選別して特異的に回収することを可能にするアーミング技術の戦略

  植田充美; 黒田浩一

  メタルバイオテクノロジーによる環境保全と資源回収―新元素戦略の新しいキーテクノロジー (シーエムシー), 201-207, 2009

  
• 細胞表層工学による新しいバイオアドソーベントー細胞表層工学を利用した金属イオンの吸着・回収リサイクルー

  黒田浩一; 植田充美

  メタルバイオテクノロジーによる環境保全と資源回収―新元素戦略の新しいキーテクノロジー (シーエムシー), 97-103, 2009

  
• 元素資源をめぐる世界情勢：資源回収と環境保全 植田充美

  植田充美

  メタルバイオテクノロジーによる環境保全と資源回収―新元素戦略の新しいキーテクノロジー (シーエムシー), 1-6, 2009

  
• バイオエタノール生産の技術開発の未来戦略

  植田充美

  酵素応用の技術と市場2009(シーエムシー), 112-119, 2009

  
• メタゲノムから有用遺伝子のハイスループットスクリーニングータンパク質への高速 変換・機能解析システムの開発―

  植田充美; 福田剛士; 芳野雄一; 深見治一; 中尾正宏

  マリンメタゲノムの有効利用(シーエムシー), 67-77, 2009

  
• 地球が問いかける人類の叡智―地球温暖化問題の解決―

  植田充美

  学士会会報, 874(2009-I), 40-47, 2009

  
• Biofuel production from cellulosic biomass by cell-surface engineering – Development of arming technology to design biocatalyst for consolidated bioprocessing (CBP) system

  K. Kuroda; M. Ueda

  Cellulose: Structure and Properties, Derivatives and Industrial Uses (Nova Science Publisher), 369-383, 2009

  
• Evaluation of the biodegradability of polyurethane and its derivatives by using lipase-displaying arming yeast

  Seiji Shibasaki; Al Kawabata; Takanori Tanino; Akihiko Kondo; Mitsuyoshi Ueda; Mamoru Tanaka

  Biocontrol Science, 2009, Peer-reviewed

  
• Therapeutic antibodies and other proteins obtained by molecular display technologies

  Seiji Shibasaki; Mitsuyoshi Ueda

  Recent Patents on Biotechnology, 2009

  
• Surface coat proteins of the pine wood nematode, Bursaphelenchus xylophilus: profiles of stage- and isolate-specific characters

  Ryoji Shinya; Yuko Takeuchi; Natsuko Miura; Kouichi Kuroda; Mitsuyoshi Ueda; Kazuyoshi Futai

  NEMATOLOGY, 2009, Peer-reviewed

  Access this paper :

  
• 環境・資源保全のためのメタルバイオテクノロジー アーミング技術による細胞表層デザインの展開―環境浄化からレアメタル・レアアース資源の選択回収へ―

  植田充美; 黒田浩一

  生物工学会誌, 25 Dec. 2008

  
• Isolation of bacteria which produce yeast cell wall-lytic enzymes and their characterization

  Seiji Shibasaki; Jun Okada; Yoshio Nakayama; Teruhisa Yoshida; Mitsuyoshi Ueda

  BIOCONTROL SCIENCE, Sep. 2008, Peer-reviewed

  
• Development of a yeast protein fragment complementation assay (PCA) system using dihydrofolate reductase (DHFR) with specific additives

  Seiji Shibasaki; Kozue Sakata; Jun Ishii; Akihiko Kondo; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Sep. 2008, Peer-reviewed

  
• Acceleration of plant and fungal growth by a sugar alcohol, erythritol

  黒田浩一; 進士和典; 鈴木雅之; 植田充美

  Foods & food ingredients journal of Japan, 01 Aug. 2008

  
• Alteration of substrate specificity of rat neurolysin from matrix metalloproteinase-2/9-type to-3-type specificity by comprehensive mutation

  Tetsuya Kadonosono; Michiko Kato-Murai; Mitsuyoshi Ueda

  PROTEIN ENGINEERING DESIGN & SELECTION, Aug. 2008, Peer-reviewed

  
• Discovery of a modified transcription factor endowing yeasts with organic-solvent tolerance and reconstruction of an organic-solvent-tolerant Saccharomyces cerevisiae strain

  Ken Matsui; Shinya Teranishi; Shohei Kamon; Kouichi Kuroda; Mitsuyoshi Ueda

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Jul. 2008, Peer-reviewed

  
• Construction of cell surface-engineered yeasts displaying antigen to detect antibodies by immunofluorescence and yeast-ELISA

  Yu Qian Tang; Shuang Yan Han; Hong Zheng; Lin Wu; Mitsuyoshi Ueda; Xiao Ning Wang; Ying Lin

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2008, Peer-reviewed

  
• 次世代医療へ向けたタンパク質デザインの展開(<特集>コンビバイオとナノバイオのコラボによる新しい世界の開拓-バイオテクノロジーの未来のかたち-)

  門之園 哲哉; 植田 充美

  生物工学会誌 : seibutsu-kogaku kaishi, 25 Jun. 2008

  
• Direct ethanol production from barley beta-glucan by sake yeast displaying Aspergillus oryzae beta-glucosidase and endoglucanase

  Atsushi Kotaka; Hiroki Bando; Masahiko Kaya; Michiko Kato-Murai; Kouichi Kuroda; Hiroshi Sahara; Yoji Hata; Akihiko Kondo; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Jun. 2008, Peer-reviewed

  
• Efficient and direct fermentation of starch to ethanol by sake yeast strains displaying fungal glucoamylases

  Atsushi Kotaka; Hiroshi Sahara; Yoji Hata; Yasuhisa Abe; Akihiko Kondo; Michiko Kato-Murai; Kouichi Kuroda; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, May 2008, Peer-reviewed

  
• Isoflavone aglycones production from isoflavone glycosides by display of beta-glucosidase from Aspergillus oryzae on yeast cell surface

  Masahiko Kaya; Junji Ito; Atsushi Kotaka; Kengo Matsumura; Hiroki Bando; Hiroshi Sahara; Chiaki Ogino; Seiji Shibasaki; Kouichi Kuroda; Mitsuyoshi Ueda; Akihiko Kondo; Yoji Hata

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2008, Peer-reviewed

  
• Novel idea of cell breeding for biomass design

  黒田浩一; 三浦夏子; 植田充美

  Bio industry, 12 Apr. 2008

  
• Novel application of yeast molecular display system to analysis of protein functions

  KATO‐MURAI Michiko; UEDA Mitsuyoshi

  生物高分子, 01 Mar. 2008

  
• Improvement in enzymatic desizing of starched cotton cloth using yeast codisplaying glucoamylase and cellulose-binding domain

  Takeshi Fukuda; Michiko Kato-Murai; Kouichi Kuroda; Mitsuyoshi Ueda; Shin-ichiro Suye

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jan. 2008, Peer-reviewed

  
• 酵母ディスプレイ法によるタンパク質の分泌生産／同時回収システム

  植田充美

  日本薬学会第128年会, 2008, Peer-reviewed

  
• バイオマスからの乳酸エステルの合成

  稲葉千晶; 植田充美

  微生物によるものづくり(シーエムシー), 281-287, 2008

  
• アーミング技術による生体触媒創製の新しい展開―ホワイトバイオテクノロジーのイノベーション

  植田充美

  微生物によるものづくり(シーエムシー), 32-42, 2008

  
• コンビバイオとナノバイオのコラボによる新しい世界の開拓―バイオテクノロジーの未来のかたちー

  植田充美; 民谷栄一

  日本生物工学会誌, 86(6), 267, 2008

  
• 微生物育種の未来開拓−細胞分子育種に変革をもたらす細胞表層工学の開拓

  植田充美; 加藤倫子; 黒田浩一

  ２１世紀の農学（京都大学学術出版会）、275-314, 2008

  
• バイオマスデザインに向けた植物育種の新発想

  黒田浩一; 三浦夏子; 植田充美

  BIOINDUSTRY, 25(4), 20-24, 2008

  
• 細胞内情報伝達のデジタル定量解析システムの構築に向けてーホスホプロテオミクスー

  植田充美

  科研費特定領域ライフサーベイヤ ニュースレター、4, 3-4, 2008

  
• Growth acceleration of plants and mushroom by erythritol

  Kouichi Kuroda; Shuji Hirakawa; Masayuki Suzuki; Kazunori Shinji; Kazuo Ogasa; Tatsuya Uraji; Teruo Amachi; Mitsuyoshi Ueda

  PLANT BIOTECHNOLOGY, 2008, Peer-reviewed

  
• Design of a serine protease-like catalytic triad on an antibody light chain displayed on the yeast cell surface

  Norihiko Okochi; Michiko Kato-Murai; Tetsuya Kadonosono; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2007, Peer-reviewed

  
• Yeast cell-surface expression of chitosanase from Paenibacillus fukuinensis

  Takeshi Fukuda; Danya Isogawa; Madoka Takagi; Michiko Kato-Murai; Hisashi Kimoto; Hideo Kusaoke; Mitsuyoshi Ueda; Shin-ichiro Suye

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Nov. 2007, Peer-reviewed

  
• Enhancement of substrate recognition ability by combinatorial mutation of beta-glucosidase displayed on the yeast cell surface

  Takeshi Fukuda; Michiko Kato-Murai; Tetsuya Kadonosono; Hiroshi Sahara; Yoji Hata; Shin-Ichiro Suye; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 2007, Peer-reviewed

  
• Femtosecond pulsed laser as a microscalpel for microdissection and isolation of specific sections from biological samples

  Masaaki Sakakura; Shinichiro Kajiyama; Masafumi Tsutsumi; Jinhai Si; Eiichiro Fukusaki; Yutaka Tamaru; Shin-Ichi Akiyama; Kiyotaka Miura; Kazuyuki Hirao; Mitsuyoshi Ueda

  JAPANESE JOURNAL OF APPLIED PHYSICS PART 1-REGULAR PAPERS BRIEF COMMUNICATIONS & REVIEW PAPERS, Sep. 2007, Peer-reviewed

  
• Development of high-throughput screening system by single-cell reaction using microchamber array chip

  Takeshi Fukuda; Michiko Kato-Murai; Shin-ichiro Suye; Mitsuyoshi Ueda

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Sep. 2007, Peer-reviewed

  
• High-efficiency recovery of target cells using improved yeast display system for detection of protein-protein interactions

  Nobuo Fukuda; Jun Ishii; Seiji Shibasaki; Mitsuyoshi Ueda; Hideki Fukuda; Akihiko Kondo

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Aug. 2007, Peer-reviewed

  
• Metallopeptidase, neurolysin, as a novel molecular tool for analysis of properties of cancer-producing matrix metalloproteinases-2 and-9

  Tetsuya Kadonosono; Michiko Kato; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2007, Peer-reviewed

  
• Substrate specificity of rat brain neurolysin disclosed by molecular display system and putative substrates in rat tissues

  Tetsuya Kadonosono; Michiko Kato; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2007, Peer-reviewed

  
• Construction of a novel synergistic system for production and recovery of secreted recombinant proteins by the cell surface engineering

  Seiji Shibasaki; Ai Kawabata; Jun Ishii; Shunsuke Yagi; Tetsuya Kadonosono; Michiko Kato; Nobuo Fukuda; Akihiko Kondo; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2007, Peer-reviewed

  
• Preparation of a whole-cell biocatalyst of mutated Candida antaretica lipase B (mCALB) by a yeast molecular display system and its practical properties

  Michiko Kato; Jun Fuchimoto; Takanori Tanino; Akihiko Kondo; Hideki Fukuda; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2007, Peer-reviewed

  
• Biochemical analysis of the yeast proteinase inhibitor (I-C) homolog I(C)h and its comparison with I-C

  Hiroaki Fukada; Joji Mima; Mitsuru Nagayama; Michiko Kato; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Feb. 2007, Peer-reviewed

  
• Enhancement of ethanol production by promoting surface contact between starch granules and arming yeast in direct ethanol fermentation

  Teik Seong Khaw; Yoshio Katakura; Kazuaki Ninomiya; Churairat Moukamnerd; Akihiko Kondo; Mitsuyoshi Ueda; Suteaki Shioya

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Jan. 2007, Peer-reviewed

  
• Specific membrane binding of the carboxypeptidase Y inhibitor I-C, a phosphatidylethanolamine-binding protein family member

  Joji Mima; Hiroaki Fukada; Mitsuru Nagayama; Mitsuyoshi Ueda

  FEBS JOURNAL, Dec. 2006, Peer-reviewed

  
• JST Innovation Plaza KYOTO UEDA Project

  UEDA Mitsuyoshi; KAJIYAMA Shin'ichiro; YABUKI Akihiko

  精密工学会誌 = Journal of the Japan Society of Precision Engineering, 05 Nov. 2006

  
• Effect of flocculation on performance of arming yeast in direct ethanol fermentation

  Khaw Teik Seong; Yoshio Katakura; Kazuaki Ninomiya; Yohei Bito; Satoshi Katahira; Akihiko Kondo; Mitsuyoshi Ueda; Suteaki Shioya

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Nov. 2006, Peer-reviewed

  
• Analysis of a processing system for proteases using yeast cell surface engineering: conversion of precursor of proteinase A to active proteinase A

  Michiko Kato; Yuko Kuzuhara; Haruko Maeda; Seizaburo Shiraga; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 2006, Peer-reviewed

  
• Enhanced sequence coverage in tryptic fragment analysis by two-dimensional HPLC/MS using a monolithic silica capillary column

  Hironobu Morisaka; Koji Hata; Joji Mima; Tetsuya Tanigawa; Masahiro Furuno; Norlo Ishizuka; Nobuo Tanaka; Mitsuyoshi Ueda

  BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, Sep. 2006, Peer-reviewed

  
• Application of the arming system for the expression of the 380R antigen from red sea bream iridovirus (RSIV) on the surface of yeast cells: A first step for the development of an oral vaccine

  Yutaka Tamaru; Masanori Ohtsuka; Keitaro Kato; Sadao Manabe; Kouichi Kuroda; Mitsuaki Sanada; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Enhancement of cellulase activity by clones selected from the combinatorial library of the cellulose-binding domain by cell surface engineering

  Takeshi Fukuda; Tomoko Ishikawa; Mariko Ogawa; Seizaburo Shiraga; Michiko Kato; Shin-Ichiro Suye; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Combinatorial bioengineering-protein display and its development

  Kaiming Ye; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Enhancement of activity of lipase-displaying yeast cells and their application to optical resolution of (R,S)-1-benzyloxy-3-chloro-2-propyl monosuccinate

  Yurie Nakamura; Takeshi Matsumoto; Fumiki Nomoto; Mitsuyoshi Ueda; Hideki Fukuda; Akihiko Kondo

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Surface display of organophosphorus hydrolase on Saccharomyces cerevisiae

  Katsumi Takayama; Shin-ichiro Suye; Kouichi Kuroda; Mitsuyoshi Ueda; Tetsuya Kitaguchi; Kouta Tsuchiyama; Takeshi Fukuda; Wilfred Chen; Ashok Mulchandani

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Construction of a cultivation system of a yeast single cell in a cell chip microchamber

  Takeshi Fukuda; Seizaburo Shiraga; Michiko Kato; Shin-ichiro Suye; Mitsuyoshi Ueda

  BIOTECHNOLOGY PROGRESS, Aug. 2006, Peer-reviewed

  
• Systems for the detection and analysis of protein-protein interactions

  Kouichi Kuroda; Michiko Kato; Joji Mima; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2006, Peer-reviewed

  
• Screening for candidate genes involved in tolerance to organic solvents in yeast

  Ken Matsui; Takashi Hirayama; Kouichi Kuroda; Katsuhiko Shirahige; Toshihiko Ashikari; Mitsuyoshi Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2006, Peer-reviewed

  
• Evaluation of performance of different surface-engineered yeast strains for direct ethanol production from raw starch

  TS Khaw; Y Katakura; J Koh; A Kondo; M Ueda; S Shioya

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2006, Peer-reviewed

  
• Detection of protein-protein interactions by a combination of a novel cytoplasmic membrane targeting system of recombinant proteins and fluorescence resonance energy transfer

  S Shibasaki; K Kuroda; HD Nguyen; T Mori; W Zou; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Apr. 2006, Peer-reviewed

  
• Effective display of metallothionein tandem repeats on the bioadsorption of cadmium ion

  K Kuroda; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Apr. 2006, Peer-reviewed

  
• Two-dimensional HPLC on-line analysis of phosphopeptides using titania and monolithic columns

  K Hata; H Morisaka; K Hara; J Mima; N Yumoto; Y Tatsu; M Furuno; N Ishizuka; M Ueda

  ANALYTICAL BIOCHEMISTRY, Mar. 2006, Peer-reviewed

  
• 高機能Candida antarctica由来リパーゼB表層提示酵母の開発とエステル合成への応用

  谷野 孝徳; 大野 卓見; 鄭 源英; 渡辺 有香; 加藤 倫子; 植田 充美; 福田 秀樹; 近藤 昭彦

  化学工学会 研究発表講演要旨集, 2006

  
• Construction of a selective cleavage system for a protein displayed on the cell surface of yeast

  M Kato; H Maeda; M Kawakami; S Shiraga; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2005, Peer-reviewed

  
• Creation of Rhizopus oryzae lipase having a unique oxyanion hole by combinatorial mutagenesis in the lid domain

  S Shiraga; M Ishiguro; H Fukami; M Nakao; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 2005, Peer-reviewed

  
• Enhanced reactivity of Rhizopus oryzae lipase displayed on yeast cell surfaces in organic solvents: Potential as a whole-cell biocatalyst in organic solvents

  S Shiraga; M Kawakami; M Ishiguro; M Ueda

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2005, Peer-reviewed

  
• Enzymatic polymerization behavior using cellulose-binding domain deficient endoglucanase II

  Nakamura, I; H Yoneda; T Maeda; A Makino; M Ohmae; J Sugiyama; M Ueda; S Kobayashi; S Kimura

  MACROMOLECULAR BIOSCIENCE, Jul. 2005, Peer-reviewed

  Access this paper :

  
• Development of miniaturized multi-channel high-performance liquid chromatography for high-throughput analysis

  Y Shintani; K Hirako; M Motokawa; T Iwano; XJ Zhou; Y Takano; M Furuno; H Minakuchi; M Ueda

  JOURNAL OF CHROMATOGRAPHY A, May 2005, Peer-reviewed

  
• Structure of the carboxypeptidase Y inhibitor I-C in complex with the cognate proteinase reveals a novel mode of the proteinase-protein inhibitor interaction

  J Mima; M Hayashida; T Fujii; Y Narita; R Hayashi; M Ueda; Y Hata

  JOURNAL OF MOLECULAR BIOLOGY, Mar. 2005, Peer-reviewed

  
• Construction of novel single-cell screening system using a yeast cell chip for nano-sized modified-protein-displaying libraries

  Takeshi Fukuda; Seizaburo Shiraga; Michiko Kato; Shohei Yamamura; Yasutaka Morita; Eiichi Tamiya; Teruo Hori; Shin-Ichiro Suye; Mitsuyoshi Ueda

  Nanobiotechnology, 2005, Peer-reviewed

  
• Polydimethylsiloxane connection for quartz microchips in a high-pressure system

  Y Shintani; K Hirako; M Motokawa; Y Takano; M Furuno; H Minakuchi; M Ueda

  ANALYTICAL SCIENCES, Dec. 2004, Peer-reviewed

  
• Crystallization and preliminary X-ray analysis of carboxypeptidase Y inhibitor I-C complexed with the cognate proteinase

  J Mima; M Hayashida; T Fujii; Y Hata; R Hayashi; M Ueda

  ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, Sep. 2004, Peer-reviewed

  
• Production of autoproteolytically subunit-assembled 7-beta-(4-carboxybutanamido)cephalosporanic acid (GL-7ACA) acylase from Pseudomonas sp C427 using a chitin-binding domain

  K Nagao; M Yamashita; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Sep. 2004, Peer-reviewed

  
• Direct production of ethanol from raw corn starch via fermentation by use of a novel surface-engineered yeast strain codisplaying glucoamylase and alpha-amylase

  H Shigechi; J Koh; Y Fujita; T Matsumoto; Y Bito; M Ueda; E Satoh; H Fukuda; A Kondo

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2004, Peer-reviewed

  
• Simple 2D-HPLC using a monolithic silica column for peptide separation

  H Kimura; T Tanigawa; H Morisaka; T Ikegami; K Hosoya; N Ishizuka; H Minakuchi; K Nakanishi; M Ueda; K Cabrera; N Tanaka

  JOURNAL OF SEPARATION SCIENCE, Jul. 2004, Peer-reviewed

  
• Construction of combinatorial library of starch-binding domain of Rhizopus oryzae glucoamylase and screening of clones with enhanced activity by yeast display method

  S Shiraga; M Kawakami; M Ueda

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2004, Peer-reviewed

  
• Combinatorial bioengineering - Development of molecular evolution

  M Ueda; A Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2004, Peer-reviewed

  
• Comparison of two forms of catalytic antibody displayed on yeast-cell surface

  Y Lin; S Shiraga; T Tsumuraya; T Matsumoto; A Kondo; Fujii, I; M Ueda

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2004, Peer-reviewed

  
• Future direction of molecular display by yeast-cell surface engineering

  M Ueda

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2004, Peer-reviewed

  
• Isolation of novel catalytic antibody clones from combinatorial library displayed on yeast-cell surface

  Y Lin; S Shiraga; T Tsumuraya; Fujii, I; T Matsumoto; A Kondo; M Ueda

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2004, Peer-reviewed

  
• Improvement of cellulose-degrading ability of a yeast strain displaying Trichoderma reesei endoglucanase II by recombination of cellulose-binding domains

  J Ito; Y Fujita; M Ueda; H Fukuda; A Kondo

  BIOTECHNOLOGY PROGRESS, May 2004, Peer-reviewed

  
• Heterologous expression of metabotropic glutamate receptor subtype 1 in Saccharomyces cerevisiae

  K Sugiyama; TP Niki; K Inokuchi; Y Teranishi; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2004, Peer-reviewed

  
• Energy-saving direct ethanol production from low-temperature-cooked corn starch using a cell-surface engineered yeast strain co-displaying glucoamylase and alpha-amylase

  H Shigechi; Y Fujita; J Koh; M Ueda; H Fukuda; A Kondo

  BIOCHEMICAL ENGINEERING JOURNAL, May 2004, Peer-reviewed

  
• Microanalysis for MDR1 ATPase by high-performance liquid chromatography with a titanium dioxide column

  Y Kimura; S Shibasaki; K Morisato; N Ishizuka; H Minakuchi; K Nakanishi; M Matsuo; T Amachi; M Ueda; K Ueda

  ANALYTICAL BIOCHEMISTRY, Mar. 2004, Peer-reviewed

  
• Yeast cell-surface display - applications of molecular display

  A Kondo; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Mar. 2004, Peer-reviewed

  
• Synergistic saccharification, and direct fermentation to ethanol, of amorphous cellulose by use of an engineered yeast strain codisplaying three types of cellulolytic enzyme

  Y Fujita; J Ito; M Ueda; H Fukuda; A Kondo

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Feb. 2004, Peer-reviewed

  
• Bioadsorption of cadmium ion by cell surface-engineered yeasts displaying metallothionein and hexa-His

  K Kuroda; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2003, Peer-reviewed

  
• Development of combinatorial bioengineering using yeast cell surface display - order-made design of cell and protein for bio-monitoring

  S Shibasaki; A Tanaka; M Ueda

  BIOSENSORS & BIOELECTRONICS, Nov. 2003, Peer-reviewed

  
• Development of a novel and functional microHPLC : Contribution to combinatorial sciences and proteomics

  UEDA Mitsuyoshi; FURUNO Masahiro; SHINTANI Yukihiro; MINAKUCHI Hiroyoshi; ISHIZUKA Norio

  Journal of the agricultural chemical society of Japan, Sep. 2003

  
• Display of a functional hetero-oligomeric catalytic antibody on the yeast cell surface

  Y Lin; T Tsumuraya; T Wakabayashi; S Shiraga; Fujii, I; A Kondo; M Ueda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Aug. 2003, Peer-reviewed

  
• Structure-function study of the amino-terminal stretch of the catalase subunit molecule in oligomerization, heme binding, and activity expression

  M Ueda; H Kinoshita; SI Maeda; W Zou; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jun. 2003, Peer-reviewed

  
• Up-regulation of the peroxisomal beta-oxidation system occurs in butyrate-grown Candida tropicalis following disruption of the gene encoding peroxisomal 3-ketoacyl-CoA thiolase

  M Ueda; N Kanayama; N Kamasawa; M Osumi; A Tanaka

  BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, Mar. 2003, Peer-reviewed

  
• Effect of catalase-specific inhibitor 3-amino-1,2,4-triazoleon yeast peroxisomal catalase in vivo

  M Ueda; H Kinoshita; T Yoshida; N Kamasawa; M Osumi; A Tanaka

  FEMS MICROBIOLOGY LETTERS, Feb. 2003, Peer-reviewed

  
• Intelligent cell-sensor

  SHIBASAKI Seiji; UEDA Mitsuyoshi

  Bioscience & industry, 01 Jan. 2003, Peer-reviewed

  
• Xylan加水分解酵素を細胞表層に提示したxylose資化酵母によるxylanからのethanol生産

  片平 悟史; 藤田 靖也; 植田 充美; 田中 渥夫; 福田 秀樹; 近藤 昭彦

  化学工学会 研究発表講演要旨集, 2003

  
• Long anchor using Flo1 protein enhances reactivity of cell surface-displayed glucoamylase to polymer substrates

  N Sato; T Matsumoto; M Ueda; A Tanaka; H Fukuda; A Kondo

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2002, Peer-reviewed

  
• Direct and efficient production of ethanol from cellulosic material with a yeast strain displaying cellulolytic enzymes

  Y Fujita; S Takahashi; M Ueda; A Tanaka; H Okada; Y Morikawa; T Kawaguchi; M Arai; H Fukuda; A Kondo

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Oct. 2002, Peer-reviewed

  
• Construction of yeast strains with high cell surface lipase activity by using novel display systems based on the Flo1p flocculation functional domain

  T Matsumoto; H Fukuda; M Ueda; A Tanaka; A Kondo

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Sep. 2002, Peer-reviewed

  
• An arming yeast with the ability to entrap fluorescent 17 beta-estradiol on the cell surface

  M Yasui; S Shibasaki; K Kuroda; M Ueda; N Kawada; J Nishikawa; T Nishihara; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2002, Peer-reviewed

  
• Cell surface-engineered yeast with ability to bind, and self-aggregate in response to, copper ion

  K Kuroda; M Ueda; S Shibasaki; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2002, Peer-reviewed

  
• Construction of engineered yeast with the ability of binding to cellulose

  Jin-Min Nam; Yasuya Fujita; Terukazu Arai; Akihiko Kondo; Yasushi Morikawa; Hirofumi Okada; Mitsuyoshi Ueda; Atsuo Tanaka

  Journal of Molecular Catalysis - B Enzymatic, 07 Jun. 2002, Peer-reviewed

  
• Efficient ethanol production from starch through development of novel flocculent yeast strains displaying glucoamylase and co-displaying or secreting alpha-amylase

  H Shigechi; K Uyama; Y Fujita; T Matsumoto; M Ueda; A Tanaka; H Fukuda; A Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Construction of whole-cell biocatalyst for xylan degradation through cell-surface xylanase display in Saccharomyces cerevisiae

  Y Fujita; S Katahira; M Ueda; A Tanaka; H Okada; Y Morikawa; H Fukuda; A Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Construction of the combinatorial library of Rhizopus oryzae lipase mutated in the lid domain by displaying on yeast cell surface

  S Shiraga; M Ueda; S Takahashi; A Tanaka

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Preparation of high activity yeast whole cell bioctalysts by optimization of intracellular production of recombinant Rhizopus oryzae lipase

  T Matsumoto; S Takahashi; M Ueda; A Tanaka; H Fukuda; A Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Expression of Rhizopus oryzae lipase gene in Saccharomyces cerevisiae

  M Ueda; S Takahashi; M Washida; S Shiraga; A Tanaka

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Structurally and functionally conserved domains in the diverse hydrophilic carboxy-terminal halves of various yeast and fungal Na+/H+ Antiporters (Nha1p)

  S Kamauchi; K Mitsui; S Ujike; M Haga; N Nakamura; H Inoue; S Sakajo; M Ueda; A Tanaka; H Kanazawa

  JOURNAL OF BIOCHEMISTRY, Jun. 2002, Peer-reviewed

  
• Efficient ethanol production from starch through development of novel flocculent yeast strains displaying glucoamylase and co-displaying or secreting alpha-amylase

  H Shigechi; K Uyama; Y Fujita; T Matsumoto; M Ueda; A Tanaka; H Fukuda; A Kondo

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Biofuel production process by novel biocatalysts

  Y Asano; H Fukuda; Y Shimada; A Tnaka; M Ueda

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Jun. 2002, Peer-reviewed

  
• Screening of a molecule endowing Saccharomyces cerevisiae with n-nonane-tolerance from a combinatorial random protein library

  W Zou; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2002, Peer-reviewed

  
• High-level ethanol production from starch by a flocculent Saccharomyces cerevisiae strain displaying cell-surface glucoamylase

  A Kondo; H Shigechi; M Abe; K Uyama; T Matsumoto; S Takahashi; M Ueda; A Tanaka; M Kishimoto; H Fukuda

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Mar. 2002, Peer-reviewed

  
• コンビナリトアル・バイオエンジニアリングによる新機能の創出－バイオテクノロジーのニューウエーブ

  植田 充美

  化学と工業,55, 263-265, 2002, Peer-reviewed

  
• Direct and efficient Production of fuel ethanol from long-chained cellulosic matenal using cellulosore-like yeast strain

  植田 充美

  Appl. Environ. Microbiol.,68, 5136-5141, 2002, Peer-reviewed

  
• Construction of surface-engineered arming yeasts with fluorescent protein sensors in response to environmental changes

  S Shibasaki; M Ueda; A Tanaka

  BIOLOGICAL SYSTEMS ENGINEERING, 2002, Peer-reviewed

  
• Construction of a combinatorial protein library displayed on yeast cell surface and its application to molecular breeding

  W Zou; M Ueda; A Tanaka

  BIOLOGICAL SYSTEMS ENGINEERING, 2002, Peer-reviewed

  
• Intelligent yeast strains with the ability to self-monitor the concentrations of intra- and extracellular phosphate or ammonium ion by emission of fluorescence from the cell surface

  S Shibasaki; Y Ninomiya; M Ueda; M Iwahashi; T Katsuragi; Y Tani; S Harashima; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2001, Peer-reviewed

  
• Intelligent yeast strains with the ability to self-monitor the concentrations of intra- and extracellular phosphate or ammonium ion by emission of fluorescence from the cell surface

  S Shibasaki; Y Ninomiya; M Ueda; M Iwahashi; T Katsuragi; Y Tani; S Harashima; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Dec. 2001, Peer-reviewed

  
• Novel and convenient methods for Candida tropicalis gene disruption using a mutated hygromycin B resistance gene

  A Hara; M Arie; T Kanai; T Matsui; H Matsuda; K Furuhashi; M Ueda; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Nov. 2001, Peer-reviewed

  
• Development of novel whole-cell immunoadsorbents by yeast surface display of the IgG-binding domain

  Y Nakamura; S Shibasaki; M Ueda; A Tanaka; H Fukuda; A Kondo

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Nov. 2001, Peer-reviewed

  
• Yeast whole-cell biocatalyst constructed by intracellular overproduction of Rhizopus oryzae lipase is applicable to biodiesel fuel production

  T Matsumoto; S Takahashi; M Kaieda; M Ueda; A Tanaka; H Fukuda; A Kondo

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Nov. 2001, Peer-reviewed

  
• Construction of a combinatorial protein library displayed on yeast cell surface using DNA random priming method

  W Zou; M Ueda; H Yamanaka; A Tanaka

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Oct. 2001, Peer-reviewed

  
• コンビナトリアル・バイオエンジニアリング--バイオテクノロジーのニューウェーブ タンパク質の新しい発現系を利用して望みの分子や細胞をつくる

  植田 充美

  現代化学, Sep. 2001, Peer-reviewed

  
• Spacer-mediated display of active lipase on the yeast cell surface

  M Washida; S Takahashi; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Sep. 2001, Peer-reviewed

  
• Repression of fatty-acyl-CoA oxidase-encoding gene expression is not necessarily a determinant of high-level production of dicarboxylic acids in industrial dicarboxylic-acid-producing Candida tropicalis

  A Hara; M Ueda; T Matsui; M Arie; H Saeki; H Matsuda; K Furuhashi; T Kanai; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Aug. 2001, Peer-reviewed

  
• コンビナトリアル・バイオエンジニアリングへの誘い(1)酵母の細胞表層工学を用いたシステム

  植田 充美

  化学, Jul. 2001, Peer-reviewed

  
• コンビナトリアル・バイオエンジニアリング 細胞表層ディスプレイ法による新機能細胞の創製

  藤田靖也; 松本健史; 近藤昭彦; 植田充美

  Bio Ind, 12 Jun. 2001, Peer-reviewed

  
• 細胞表層工学とコンビナトリアル・バイオエンジニアリング (特集 コンビナトリアル・バイオエンジニアリング)

  植田 充美; 田中 渥夫

  バイオインダストリ-, Jun. 2001, Peer-reviewed

  
• Quantitative evaluation of the enhanced green fluorescent protein displayed on the cell surface of Saccharomyces cerevisiae by fluorometric and confocal laser scanning microscopic analyses

  S Shibasaki; M Ueda; T Iizuka; M Hirayama; Y Ikeda; N Kamasawa; M Osumi; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2001, Peer-reviewed

  
• Genetically controlled self-aggregation of cell-surface-engineered yeast responding to glucose concentration

  W Zou; M Ueda; A Tanaka

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, May 2001, Peer-reviewed

  
• Function of the prosequence for in vivo folding and secretion of active Rhizopus oryzae lipase in Saccharomyces cerevisiae

  S Takahashi; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, May 2001, Peer-reviewed

  
• Molecular Tool Creating Novel and Functonal Bio-active Molecules: Combinatorial Bioengineering

  UEDA Mitsuyoshi

  Kobunshi, 01 Apr. 2001, Peer-reviewed

  
• 細胞表層工学--細胞の表層を自在に操り,新しい機能を与える

  植田 充美

  現代化学, Apr. 2001, Peer-reviewed

  
• Repression of fatty-acyl-CoA oxidase-encoding gene expression is not necessarily a determinant of high-level production of dicarboxylic acids in industrial dicarboxylic-acid-producing Candida tropicalis

  A. Hara; M. Ueda; T. Matsui; M. Arie; H. Saeki; H. Matsuda; K. Furuhashi; T. Kanai; A. Tanaka

  Applied Microbiology and Biotechnology, 2001, Peer-reviewed

  
• Cell surface-engineered yeast displaying a histidine oligopeptide (hexa-His) has enhanced adsorption of and tolerance to heavy metal ions

  K. Kuroda; S. Shibasaki; M. Ueda; A. Tanaka

  Applied Microbiology and Biotechnology, 2001, Peer-reviewed

  
• 細胞表層ディスプレイによる酵母の育種と応用

  植田 充美

  化学工学会誌,65, 415-418, 2001, Peer-reviewed

  
• 細胞表層ディスプレイ法の進展とコンビナリトアル・バイオエンジニアリングへの展開

  植田 充美

  生物工学会誌,79, 363-367, 2001, Peer-reviewed

  
• コンビナトリアル・バイオエンジニアリング-新バイオ分子の創造とプロテオミックスへの切り札-

  植田 充美

  BIO INDUSTRY,/6,5-6, 2001, Peer-reviewed

  
• Molecular tools to creat anovel and tunctional bio-active molecules

  植田 充美

  Polymer,50/4,254, 2001, Peer-reviewed

  
• Molecular breeding of arming yeasts with hydrolytic enzymes by cell surface engineering

  植田 充美

  Applied Microbiology,2, 59-73, 2001, Peer-reviewed

  
• Function of the prosequence and secretion of active ┣DBRhizopus(/)-┫DB ┣DBoryzae(/)-┫DB lipase in ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB

  植田 充美

  Appl. Microbiol. Biotechnol.,55, 454-462, 2001, Peer-reviewed

  
• Development of cell surface display and its application

  植田 充美

  Biomedical Science,5/2,299-304, 2001, Peer-reviewed

  
• Cytochemical evaluation of localization and secretion of heterologous enzymes displayed on yeast cell surface

  植田 充美

  FEMS Microbiol. Lett,56, 478-485, 2001, Peer-reviewed

  
• Creation of cell surface-engineered yeast cohich can emit different fluorescence inresponse to the glucose concentration

  植田 充美

  Appl. Microbiol. Biotechnol.,57, 528-533, 2001, Peer-reviewed

  
• Creation of a novl and functional cells by cell surface display

  植田 充美

  BIO INDUSTRY,/6,56-63, 2001, Peer-reviewed

  
• Cell surface engineerig & Combinatorial Bioengineering

  植田 充美

  BIO INDUSTRY,/6,49-55, 2001, Peer-reviewed

  
• Creation of cell surface-engineered yeast that display different fluorescent proteins in response to the glucose concentration

  S. Shibasaki; M. Ueda; K. Ye; K. Shimizu; N. Kamasawa; M. Osumi; A. Tanaka

  Applied Microbiology and Biotechnology, 2001, Peer-reviewed

  
• Technology 細胞表層ディスプレイ系の開発と応用

  近藤 昭彦; 植田 充美

  遺伝子医学, 2001, Peer-reviewed

  
• ポストシークエンス時代に臨む情報科学 細胞表層工学とコンビナトリアル・バイオエンジニアリング ポストゲノムシークエンシング研究へのニューウェーブ

  植田充美; 田中渥夫

  CICSJ Bull (Div Chem Inf Comput Sci Chem Soc Jpn), 10 Nov. 2000, Peer-reviewed

  
• Screening of genes involved in isooctane tolerance in Saccharomyces cerevisiae by using mRNA differential display

  S Miura; W Zou; M Ueda; A Tanaka

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Nov. 2000, Peer-reviewed

  
• Cytochemical evaluation of localization and secretion of a heterologous enzyme displayed on yeast cell surface

  Y Shibasaki; N Kamasawa; S Shibasaki; W Zou; T Murai; M Ueda; A Tanaka; M Osumi

  FEMS MICROBIOLOGY LETTERS, Nov. 2000, Peer-reviewed

  
• Gene-engineered hydrophobilization to alter the bactericidal activity of lysozyme

  Y Ito; OH Kwon; M Ueda; A Tanaka; Y Imanishi

  JOURNAL OF BIOACTIVE AND COMPATIBLE POLYMERS, Sep. 2000, Peer-reviewed

  
• Effect of the truncation of the C-terminal region of Kex2 endoprotease on processing of the recombinant Rhizopus oryzae lipase precursor in the co-expression system in yeast

  S Takahashi; M Ueda; A Tanaka

  JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, Sep. 2000, Peer-reviewed

  
• Cell surface engineering of yeast: Construction of arming yeast with biocatalyst

  M Ueda; A Tanaka

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Aug. 2000, Peer-reviewed

  
• Establishment of a simple system to analyse the molecular interaction in the agglutination of Saccharomyces cerevisiae

  W Zou; M Ueda; T Murai; A Tanaka

  YEAST, Aug. 2000, Peer-reviewed

  
• Construction of an engineered yeast with glucose-inducible emission of green fluorescence from the cell surface

  K Ye; S Shibasaki; M Ueda; T Murai; N Kamasawa; M Osumi; K Shimizu; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jul. 2000, Peer-reviewed

  
• An n-alkane-responsive promoter element found in the gene encoding the peroxisomal protein of Candida tropicalis does not contain a C-6 zinc cluster DNA-binding motif

  T Kanai; A Hara; N Kanayama; M Ueda; A Tanaka

  JOURNAL OF BACTERIOLOGY, May 2000, Peer-reviewed

  Access this paper :

  
• An n-alkane-responsive promoter element found in the gene encoding the peroxisomal protein of Candida tropicalis does not contain a C6 zinc cluster DNA-binding motif

  Tamotsu Kanai; Akihiro Hara; Naoki Kanayama; Mitsuyoshi Ueda; Atsuo Tanaka

  Journal of Bacteriology, May 2000, Peer-reviewed

  
• Genetic immobilization of proteins on the yeast cell surface

  M Ueda; A Tanaka

  BIOTECHNOLOGY ADVANCES, Apr. 2000, Peer-reviewed

  
• A mutated hygromycin resistance gene is functional in the n-alkane-assimilating yeast Candida tropicalis

  A Hara; M Ueda; S Misawa; T Matsui; K Furuhashi; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Mar. 2000, Peer-reviewed

  
• A mutated hygromycin resistance gene is functional in the n-alkane-assimilating yeast Candida tropicalis

  A Hara; M Ueda; S Misawa; T Matsui; K Furuhashi; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Mar. 2000, Peer-reviewed

  
• Genetic evaluation of peroxisomal and cytosolic acetoacetyl-CoA thiolase isozymes in ┣DBn(/)-┫DB-alkane-assimilating diploid yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  Cell Biochem. Biophys.,32/,285-290, 2000, Peer-reviewed

  
• 細胞表層工学によるコンビナトリアル・バイオエンジニアリング

  植田 充美

  国際技術情報誌,11, 202-206, 2000, Peer-reviewed

  
• Cell surface engineering & Combinatorial bioengineering

  植田 充美

  CICSJ Bulletin,18/5,14-16, 2000, Peer-reviewed

  
• Genetic Evaluation of Peroxisomal and Cytosolic Acetoacetyl-CoA Thiolase Isozymes in n-Alkane-Assimilating Diploid Yeast, Candida tropicalis

  Mitsuyoshi Ueda; Naoki Kanayama; Atsuo Tanaka

  Cell Biochemistry and Biophysics, 2000, Peer-reviewed

  
• Sorting of Peroxisomal and Mitochondrial Carnitine Acetyltransferase Isozymes in the Diploid Yeast, Candida tropicalis

  Atsuo Tanaka; Mitsuyoshi Ueda

  Cell Biochemistry and Biophysics, 2000, Peer-reviewed

  
• 細胞表層工学によるプロトタイプのセルロソームアーキテクチャー(<特集>細胞表層工学II)

  田中 渥夫; 植田 充美

  生物工学会誌 : seibutsu-kogaku kaishi, 25 Dec. 1999, Peer-reviewed

  
• 最新の醸造科学 細胞表層工学による酵母細胞の新しい分子育種

  植田 充美; 田中 渥夫

  日本醸造協会誌, Nov. 1999, Peer-reviewed

  
• Expression of the SNF1 gene from Candida tropicalis is required for growth on various carbon sources, including glucose

  T Kanai; K Ogawa; M Ueda; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Oct. 1999, Peer-reviewed

  
• Expression of the SNF1 gene from Candida tropicalis is required for growth on various carbon sources, including glucose

  T Kanai; K Ogawa; M Ueda; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Oct. 1999, Peer-reviewed

  
• Independent production of two molecular forms of a recombinant Rhizopus oryzae lipase by KEX2-engineered strains of Saccharomyces cerevisiae

  S Takahashi; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 1999, Peer-reviewed

  
• 代謝工学における細胞表層の開拓 (特集 代謝工学の進歩)

  植田 充美; 田中 渥夫

  ケミカルエンジニヤリング, Jun. 1999, Peer-reviewed

  
• Construction of an autonomously replicating plasmid in n-alkane-assimilating yeast, Candida tropicalis

  A Hara; M Ueda; T Matsui; K Furuhashi; N Kanayama; A Tanaka

  JOURNAL OF BIOSCIENCE AND BIOENGINEERING, Jun. 1999, Peer-reviewed

  
• Development of an arming yeast strain for efficient utilization of starch by co-display of sequential amylolytic enzymes on the cell surface

  T Murai; M Ueda; Y Shibasaki; N Kamasawa; M Osumi; T Imanaka; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jan. 1999, Peer-reviewed

  
• Three-dimensional analysis of protein aggregate body in Saccharomyces cerevisiae cells

  N Kamasawa; T Yoshida; M Ueda; A Tanaka; M Osumi

  JOURNAL OF ELECTRON MICROSCOPY, 1999, Peer-reviewed

  
• Three-dimensional analysis of protein aggregate body in Saccharomyces cerevisiae cells

  Naomi Kamasawa; Tomoko Yoshida; Mitsuyoshi Ueda; Atsuo Tanaka; Masako Osumi

  Journal of Electron Microscopy, 1999, Peer-reviewed

  
• Practical application of microbial cell surface engineering

  植田 充美

  Recent Res. Devel. Microbiol.,3/,7-22, 1999, Peer-reviewed

  
• Independent production of two molecular forms of a recombinant ┣DBRhizopus(/)-┫DB┣DBoryzae(/)-┫DB lipases by ┣DBKEX2(/)-┫DB-engineered strains of ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB

  植田 充美

  Appl. Microbiol. Biotechnol.,52/4,534-540, 1999, Peer-reviewed

  
• Cellulosome Architecture by cell surface engineering

  植田 充美

  J. Biosci. Bioeng.,77/12,505-509, 1999, Peer-reviewed

  
• Application of cell surface in metabolic engineering

  植田 充美

  ,44/6,440-446, 1999, Peer-reviewed

  
• A nonel molecular breeding of yeast cells by cell surface engineering

  植田 充美

  J. Brewer.,94/11,860-867, 1999, Peer-reviewed

  
• Hydrophobilization of esterase by genetic combination with polyproline or polytyrosine at the carboxyl terminal [Biochimica et Biophysica Acta, 1388 (1998) 239-246] PII: S0167483898001708)

  O. H. Kwon; Y. Ito; M. Ueda; A. Tanaka; Y. Imanishi

  Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology, 1999, Peer-reviewed

  
• 細胞表層工学

  植田 充美

  バイオインダストリ-, Dec. 1998, Peer-reviewed

  
• Assimilation of cellooligosaccharides by a cell surface-engineered yeast expressing beta-glucosidase and carboxymethylcellulase from Aspergillus aculeatus

  T Murai; M Ueda; T Kawaguchi; M Arai; A Tanaka

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Dec. 1998, Peer-reviewed

  
• Hydrophobilization of esterase by genetic combination with polyproline or polytyrosine at the carboxyl terminal

  OH Kwon; Y Ito; M Ueda; A Tanaka; Y Imanishi

  BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, Oct. 1998, Peer-reviewed

  
• Hydrophobilization of an esterase by genetic combination with polyproline at the carboxyl terminal

  OH Kwon; Y Ito; M Ueda; A Tanaka; Y Imanishi

  BIOTECHNOLOGY AND BIOENGINEERING, Sep. 1998, Peer-reviewed

  
• A regulatory factor, Fil1p, involved in derepression of the isocitrate lyase gene in Saccharomyces cerevisiae - A possible mitochondrial protein necessary for protein synthesis in mitochondria

  T Kanai; S Takeshita; H Atomi; K Umemura; M Ueda; A Tanaka

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Aug. 1998, Peer-reviewed

  
• A regulatory factor, Fil1p, involved in derepression of the isocitrate lyase gene in Saccharomyces cerevisiae - A possible mitochondrial protein necessary for protein synthesis in mitochondria

  T Kanai; S Takeshita; H Atomi; K Umemura; M Ueda; A Tanaka

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Aug. 1998, Peer-reviewed

  
• Peroxisomal and mitochondrial carnitine acetyltransferase isozymes of the n-alkane-assimilating yeast, Candida tropicalis, occurred by alternative initiation of translation from the transcripts of a single gene

  M Ueda; H Kawachi; H Atomi; A Tanaka

  BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, Apr. 1998, Peer-reviewed

  
• Genetic evaluation of physiological functions of thiolase isozymes in the n-alkane-assimilating yeast Candida tropicalis

  N Kanayama; M Ueda; H Atomi; A Tanaka

  JOURNAL OF BACTERIOLOGY, Feb. 1998, Peer-reviewed

  
• Expression of human histidine decarboxylase in Saccharomyces cerevisiae

  H. Ueno; T. Kanai; H. Atomi; M. Ueda; A. Tanaka; H. Ohtsu; K. Yamauchi; T. Watanabe

  Journal of Biochemistry, Molecular Biology and Biophysics, 1998, Peer-reviewed

  
• アーミング酵母創製の展開

  植田 充美

  日本生物工学会誌,76/12,508-512, 1998, Peer-reviewed

  
• 細胞表層工学による細胞への新機能の賦与

  植田 充美

  日本応用酵素協会誌,33/,18-27, 1998, Peer-reviewed

  
• Genetic evaluation of physiological functions of thiolase isozymes in ┣DBn(/)-┫DB-alkane-assimilating yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  J. Bacteriol,180/3,690-698, 1998, Peer-reviewed

  
• Extracellular production of active Rhizopus oryzae lipase by Caccharomyces cerevisiae

  Shouji Takahashi; Mitsuyoshi Ueda; Haruyuki Atomi; Hans D. Beer; Uwe T. Bornscheuer; Rolf D. Schmid; Atsuo Tanaka

  Journal of Fermentation and Bioengineering, 1998, Peer-reviewed

  
• Expression of human histidine decarboxylase in ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB

  植田 充美

  J. Biochem. Mol. Biol. Biophys,2/2,141-146, 1998, Peer-reviewed

  
• Expression and subcellular localization of Candida tropicalis catalase in catalase gene disruptants of Saccharomyces cerevisiae

  Hiroshi Kinoshita; Mitsuyoshi Ueda; Haruyuki Atomi; Noriko Hashimoto; Keiko Kobayashi; Tomoko Yoshida; Naomi Kamasawa; Masako Osumi; Atsuo Tanaka

  Journal of Fermentation and Bioengineering, 1998, Peer-reviewed

  
• Endowment of a novel function to cells by cell surface engineering

  植田 充美

  ,33/,18-27, 1998, Peer-reviewed

  
• Development of construction of arming yeast

  植田 充美

  ,76/12,508-512, 1998, Peer-reviewed

  
• Cell Surface Engineering

  植田 充美

  BIO INDUSTRY,15/12,19-27, 1998, Peer-reviewed

  
• Expression and subcellular localization of Candida tropicalis catalase in catalase gene disruptants of Saccharomyces cerevisiae

  H Kinoshita; M Ueda; H Atomi; N Hashimoto; K Kobayashi; T Yoshida; N Kamasawa; M Osumi; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1998, Peer-reviewed

  
• Extracellular production of active Rhizopus oryzae lipase by Saccharomyces cerevisiae

  S Takahashi; M Ueda; H Atomi; HD Beer; UT Bornscheuer; RD Schmid; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1998, Peer-reviewed

  
• Evaluation of the function of arming yeast displaying glucoamylase on its cell surface by direct fermentation of corn to ethanol

  T Murai; T Yoshino; M Ueda; Haranoya, I; T Ashikari; H Yoshizumi; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1998, Peer-reviewed

  
• Molecular breeding of polysaccharide-utilizing yeast cells by cell surface engineering

  M Ueda; T Murai; Y Shibasaki; N Kamasawa; M Osumi; A Tanaka

  ENZYME ENGINEERING XIV, 1998, Peer-reviewed

  
• Recombinant thermostable cycloinulo-oligosaccharide fructanotransferase produced by Saccharomyces cerevisiae

  T Kanai; N Ueki; T Kawaguchi; Y Teranishi; H Atomi; C Tomorbaatar; M Ueda; A Tanaka

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Dec. 1997, Peer-reviewed

  
• Immunochemically distinct NADP-linked isocitrate dehydrogenase isozymes in mitochondria and peroxisomes of Candida tropicalis

  T Imajo; H Kawachi; H Atomi; S Sanuki; S Yamamoto; M Ueda; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Nov. 1997, Peer-reviewed

  
• Gene analysis of an NADP-linked isocitrate dehydrogenase localized in peroxisomes of the n-alkane-assimilating yeast Candida tropicalis

  H Kawachi; K Shimizu; H Atomi; S Sanuki; M Ueda; A Tanaka

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Nov. 1997, Peer-reviewed

  
• Bactericidal activity of human lysozymes carrying various lengths of polyproline chain at the C-terminus

  Y Ito; OH Kwon; M Ueda; A Tanaka; Y Imanishi

  FEBS LETTERS, Oct. 1997, Peer-reviewed

  
• Genetic immobilization of cellulase on the cell surface of Saccharomyces cerevisiae

  T Murai; M Ueda; H Atomi; Y Shibasaki; N Kamasawa; M Osumi; T Kawaguchi; M Arai; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Oct. 1997, Peer-reviewed

  
• Expression of acetoacetyl-CoA thiolase isozyme genes of n-alkane-assimilating yeast, Candida tropicalis: Isozymes in two intracellular compartments are derived from the same genes

  N Kanayama; Y Himeda; H Atomi; M Ueda; A Tanaka

  JOURNAL OF BIOCHEMISTRY, Sep. 1997, Peer-reviewed

  
• Expression of acetoacetyl-CoA thiolase isozyme genes of n-alkane-assimilating yeast, Candida tropicalis: Isozymes in two intracellular compartments are derived from the same genes

  N Kanayama; Y Himeda; H Atomi; M Ueda; A Tanaka

  JOURNAL OF BIOCHEMISTRY, Sep. 1997, Peer-reviewed

  
• Cell surface layer engineering of the yeast.

  UEDA Mitsuyoshi; TANAKA Atsuo

  KAGAKU TO SEIBUTSU, 25 Jul. 1997, Peer-reviewed

  
• Characterization of the intron-containing citrate synthase gene from the alkanotrophic yeast Candida tropicalis: Cloning and expression in Saccharomyces cerevisiae

  M Ueda; S Sanuki; H Kawachi; K Shimizu; H Atomi; A Tanaka

  ARCHIVES OF MICROBIOLOGY, Jul. 1997, Peer-reviewed

  
• 細胞表層工学による新機能細胞の創製

  植田充美

  バイオサイエンスとインダストリー, Apr. 1997, Peer-reviewed

  
• Construction of a starch-utilizing yeast by cell surface engineering

  T Murai; M Ueda; M Yamamura; H Atomi; Y Shibasaki; N Kamasawa; M Osumi; T Amachi; A Tanaka

  APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Apr. 1997, Peer-reviewed

  
• Derepression of gene expression mediated by the 5' upstream region of the isocitrate lyase gene of Candida tropicalis is controlled by two distinct regulatory pathways in Saccharomyces cerevisiae

  K Umemura; H Atomi; T Kanai; S Takeshita; N Kanayama; M Ueda; A Tanaka

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Feb. 1997, Peer-reviewed

  
• Analysis of carbon source-regulated gene expression by the upstream region of the Candida tropicalis malate synthase gene in Saccharomyces cerevisiae

  Ken Umemura; Haruyuki Atomi; Michihiro Izuta; Tamotsu Kanai; Shigeru Takeshita; Mitsuyoshi Ueda; Atsuo Tanaka

  Biochimica et Biophysica Acta - Gene Structure and Expression, 03 Jan. 1997, Peer-reviewed

  
• Nonradioisotope assay to examine adaptability of nonnatural amino acids to the active center of ribosomal A site

  Y Ito; N Teramoto; T Kawai; Y Imanishi; M Ueda; A Tanaka

  JOURNAL OF BIOACTIVE AND COMPATIBLE POLYMERS, Jan. 1997, Peer-reviewed

  
• Evaluation of peroxisomal heme in yeast

  O Soga; H Kinoshita; M Ueda; A Tanaka

  JOURNAL OF BIOCHEMISTRY, Jan. 1997, Peer-reviewed

  
• 目で見るバイオ一酵母の細胞表層工学

  植田 充美

  バイオサイエンスとインダストリー,55/4,253-254, 1997, Peer-reviewed

  
• Gene analysis of an NADP-linked isocitrate dehydrogenase localized in peroxisomes of the n-alkanes-assimilating yeast Candida tropicalis

  Hiroyuki Kawachi; Kaori Shimizu; Haruyuki Atomi; Shin-Ichi Sanuki; Mitsuyoshi Ueda; Atsuo Tanaka

  European Journal of Biochemistry, 1997, Peer-reviewed

  
• Characterization of the intron-containing citrate synthase gene from the alkanotrophic yeast Candida tropicalis: Cloning and expression in Saccharomyces cerevisiae

  Mitsuyoshi Ueda; Shin-Ichi Sanuki; Hiroyuki Kawachi; Kaori Shimizu; Haruyuki Atomi; Atsuo Tanaka

  Archives of Microbiology, 1997, Peer-reviewed

  
• Cell surface engineering of yeast

  植田 充美

  Bioscience and Industry,55/4,253-254, 1997, Peer-reviewed

  
• Analysis of carbon source-regulated gene expression by the upstream region of the Candida tropicalis malate synthase gene in Saccharomyces cerevisiae

  K Umemura; H Atomi; M Izuta; T Kanai; S Takeshita; M Ueda; A Tanaka

  BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, Jan. 1997, Peer-reviewed

  
• Hydrophobilization of lysozyme by genetic combination with polyproline at the carboxyl terminal

  Y Ito; N Hamamatsu; OH Kwon; M Ueda; A Tanaka; Y Imanishi

  CHEMISTRY LETTERS, 1997, Peer-reviewed

  
• Subcellular destination of mutant peroxisomal isocitrate lyase polypeptides of Candida tropicalis in Saccharomyces cerevisiae

  N Kamasawa; T Yoshida; M Kasahara; Y Kamada; W Zou; M Ueda; A Tanaka; M Osumi

  JOURNAL OF ELECTRON MICROSCOPY, Dec. 1996, Peer-reviewed

  
• Individual expression of Candida tropicalis peroxisomal and mitochondrial carnitine acetyltransferase-encoding genes and subcellular localization of the products in Saccharomyces cerevisiae

  H Kawachi; H Atomi; M Ueda; N Hashimoto; K Kobayashi; T Yoshida; N Kamasawa; M Osumi; A Tanaka

  JOURNAL OF BIOCHEMISTRY, Oct. 1996, Peer-reviewed

  
• Peroxisomal and mitochondrial carnitine acetyltransferases of the n-alkane-assimilating yeast Candida tropicalis - Analysis of gene structure and translation products

  H Kawachi; H Atomi; M Ueda; A Tanaka

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Jun. 1996, Peer-reviewed

  
• Immunoelectron microscopic observation of the behaviors of peroxisomal enzymes inducibly synthesized in an n-alkane-utilizable yeast cell, Candida tropicalis

  N Kamasawa; Ohtsuka, I; Y Kamada; M Ueda; A Tanaka; M Osumi

  CELL STRUCTURE AND FUNCTION, Apr. 1996, Peer-reviewed

  
• A novel heterologous gene expression system in Saccharomyces cerevisiae using the isocitrate lyase gene promoter from Candida tropicalis

  T Kanai; H Atomi; K Umemura; H Ueno; Y Teranishi; M Ueda; A Tanaka

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Feb. 1996, Peer-reviewed

  
• Subcellular destination of mutant peroxisomal isocitrate lyase polypeptides of ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB in ┣DBS. cerevisiae(/)-┫DB

  植田 充美

  J. Electron. Microsc.,45/6,491-497, 1996, Peer-reviewed

  
• Strong Expression of Peroxisomal Malate Synthase Genes from n-Alkane-Utilizable Yeast Candida tropicalis in Saccharomyces cerevisiae

  Toshiyuki Murai; Haruyuki Atomi; Mitsuyoshi Ueda; Atsuo Tanaka

  Journal of Fermentation and Bioengineering, 1996, Peer-reviewed

  
• Genetic engineering for hydrolysis of starch and production of food additives -Cell surface engineering for construction of a starch-utilizing yeast

  植田 充美

  Ann. Rep. ICBiotech.,19/,544-550, 1996, Peer-reviewed

  
• Function of thiolase (]G0001[) in ┣DBn(/)-┫DB-alkane-assimilating yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  Ann. Rep. ICBiotech.,19/,126-134, 1996, Peer-reviewed

  
• A novel heterologous gene expression system in Saccharomyces cerevisiae using the isocitrate lyase gene promoter from Candida tropicalis

  T. Kanai; H. Atomi; K. Umemura; H. Ueno; Y. Teranishi; M. Ueda; A. Tanaka

  Applied Microbiology and Biotechnology, 1996, Peer-reviewed

  
• Strong expression of peroxisomal malate synthase genes from n-alkane-utilizable yeast Candida tropicalis in Saccharomyces cerevisiae

  T Murai; H Atomi; M Ueda; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1996, Peer-reviewed

  
• Transcriptional regulation of peroxisomal glyoxylate cycle enzymes of an n-alkane-assimilating yeast, Candida tropicalis

  H Atomi; K Umemura; M Ueda; A Tanaka

  PEROXISOMES: BIOLOGY AND ROLE IN TOXICOLOGY AND DISEASE, 1996, Peer-reviewed

  
• THE UPSTREAM REGION OF THE ISOCITRATE LYASE GENE (UPR-ICL) OF CANDIDA-TROPICALIS INDUCES GENE-EXPRESSION IN BOTH SACCHAROMYCES-CEREVISIAE AND ESCHERICHIA-COLI BY ACETATE VIA 2 DISTINCT PROMOTERS

  H ATOMI; K UMEMURA; T HIGASHIJIMA; T KANAI; Y YOTSUMOTO; Y TERANISHI; M UEDA; A TANAKA

  ARCHIVES OF MICROBIOLOGY, May 1995, Peer-reviewed

  
• NOVEL NADP-LINKED ISOCITRATE DEHYDROGENASE PRESENT IN PEROXISOMES OF N-ALKANE-UTILIZING YEAST, CANDIDA-TROPICALIS - COMPARISON WITH MITOCHONDRIAL NAD-LINKED ISOCITRATE DEHYDROGENASE

  S YAMAMOTO; H ATOMI; M UEDA; A TANAKA

  ARCHIVES OF MICROBIOLOGY, Feb. 1995, Peer-reviewed

  
• A novel promoter, derived from the isocitrate lyase gene of Candida tropicalis, inducible with acetate in Saccharomyces cerevisiae

  K. Umemura; H. Atomi; T. Kanai; Y. Teranishi; M. Ueda; A. Tanaka

  Applied Microbiology and Biotechnology, 1995, Peer-reviewed

  
• The upstream region of the isocitrate lyase gene┣DB(UPR-ICL)(/)-┫DB of ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB induces gene expression in both ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB and ┣DBEscherichia(/)-┫DB ┣DBcoli(/)-┫DB ┣DBvia(/)-┫DB two distinct

  植田 充美

  Arch. Microbiol.,163/5,322-328, 1995, Peer-reviewed

  
• Effects of carbon source on the application of a novel foreign gene expression system in Saccharomyces cerevisiae using the upstream region of the Candida tropicalis isocitrate lyase gene (UPR-ICL)

  K Umemura; H Atomi; T Kanai; Y Teranishi; M Ueda; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1995, Peer-reviewed

  
• 3-Ketoacyl-CoA thiolases of a yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  Ann. N. Y. Acad. Sci.,750/,39-43, 1995, Peer-reviewed

  
• Effects of carbon source on the application of a novel foreign gene expression system in Saccharomyces cerevisiae using the upstream region of the Candida tropicalis isocitrate lyase gene (UPR-ICL)

  K Umemura; H Atomi; T Kanai; Y Teranishi; M Ueda; A Tanaka

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1995, Peer-reviewed

  
• 3-KETOACYL COA THIOLASES OF A YEAST, CANDIDA-TROPICALIS - PROPERTIES AND FUNCTIONS

  A TANAKA; T KURIHARA; N KANAYAMA; H ATOMI; M UEDA

  ENZYME ENGINEERING XII, 1995, Peer-reviewed

  
• Characterization of catalase of ┣DBn(/)-┫DB-alkane-utilizing Yeast ┣DBCandida tropicalis(/)-┫DB functionally expressed in ┣DBSaccharomyces cerevisiae(/)-┫DB

  植田 充美

  Applied Microbiology and Biotechnology,40/5,682-686, 1994, Peer-reviewed

  
• PEPTIDE-SYNTHESIS WITH HALOPHENYLALANINES BY THERMOLYSIN

  Y IMAOKA; T KAWAMOTO; M UEDA; A TANAKA

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jan. 1994, Peer-reviewed

  
• CHARACTERIZATION OF THE CATALASE OF THE N-ALKANE-UTILIZING YEAST CANDIDA-TROPICALIS FUNCTIONALLY EXPRESSED IN SACCHAROMYCES-CEREVISIAE

  H KINOSHITA; H ATOMI; M UEDA; A TANAKA

  APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, Jan. 1994, Peer-reviewed

  
• MOLECULAR EVOLUTION OF YEAST THIOLASE ISOZYMES

  N KANAYAMA; M UEDA; H ATOMI; T KURIHARA; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1994, Peer-reviewed

  
• COMPARISON OF MOLECULAR-STRUCTURES AND REGULATION OF BIOSYNTHESIS OF UNIQUE THIOLASE ISOZYMES LOCALIZED ONLY IN PEROXISOMES OF N-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS

  N KANAYAMA; M UEDA; H ATOMI; T KURIHARA; J KONDO; Y TERANISHI; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1994, Peer-reviewed

  
• MOLECULAR PHYSIOLOGY OF YEAST PEROXISOMES AND ITS DEVELOPMENT

  M UEDA

  SEIBUTSU-KOGAKU KAISHI-JOURNAL OF THE SOCIETY FOR FERMENTATION AND BIOENGINEERING, 1994, Peer-reviewed

  
• CHARACTERIZATION OF A DICARBOXYLIC ACID-PRODUCING MUTANT OF THE YEAST CANDIDA-TROPICALIS

  H ATOMI; C YU; A HARA; T MATSUI; N NAITO; N KAMASAWA; M OSUMI; M UEDA; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1994, Peer-reviewed

  
• ASSIMILATION OF ALKANES BY YEASTS - FUNCTIONS AND BIOGENESIS OF PEROXISOMES

  A TANAKA; M UEDA

  MYCOLOGICAL RESEARCH, Sep. 1993, Peer-reviewed

  
• PRESENCE OF CARNITINE ACETYLTRANSFERASE IN PEROXISOMES AND IN MITOCHONDRIA OF OLEIC ACID-GROWN SACCHAROMYCES-CEREVISIAE

  H ATOMI; M UEDA; J SUZUKI; Y KAMADA; A TANAKA

  FEMS MICROBIOLOGY LETTERS, Aug. 1993, Peer-reviewed

  
• Construction of a Novel Biocatalyst Based on an Organelle Model. Expression of the Latent Function of the Enzyme by Organized Assemblies.

  UEDA M; TANAKA A

  Bioprod Bioprocesses 2, 1993, Peer-reviewed

  
• Molecular cloning of the peroxisomal bifunctional enzyme gene from ┣DBn(/)-┫DB-alkans-utilizable yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB pK233

  植田 充美

  Ann. Rep. ICBiotech.,16/,215-222, 1993, Peer-reviewed

  
• PHYSIOLOGICAL ROLES OF ACETOACETYL-COA THIOLASE IN N-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS - POSSIBLE CONTRIBUTION TO ALKANE DEGRADATION AND STEROL BIOSYNTHESIS

  T KURIHARA; M UEDA; N KAMASAWA; M OSUMI; A TANAKA

  JOURNAL OF BIOCHEMISTRY, Dec. 1992, Peer-reviewed

  
• PEROXISOMAL ACETOACETYL-COA THIOLASE OF AN N-ALKANE-UTILIZING YEAST, CANDIDA-TROPICALIS

  T KURIHARA; M UEDA; N KANAYAMA; J KONDO; Y TERANISHI; A TANAKA

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Dec. 1992, Peer-reviewed

  
• BETA-OXIDATION OF BUTYRATE, THE SHORT-CHAIN-LENGTH FATTY-ACID, OCCURS IN PEROXISOMES IN THE YEAST CANDIDA-TROPICALIS

  T KURIHARA; M UEDA; H OKADA; N KAMASAWA; N NAITO; M OSUMI; A TANAKA

  JOURNAL OF BIOCHEMISTRY, Jun. 1992, Peer-reviewed

  
• IMMUNOELECTRON MICROSCOPIC LOCALIZATION OF THIOLASES, BETA-OXIDATION ENZYMES OF AN N-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS

  N KAMASAWA; N NAITO; T KURIHARA; Y KAMADA; M UEDA; A TANAKA; M OSUMI

  CELL STRUCTURE AND FUNCTION, Jun. 1992, Peer-reviewed

  
• Expression cloning of catalase genomic gene: Genomic DNA expression library of Candida boidinii in Saccharomyces cerevisiae

  Jian Zheng; Haruyuki Atomi; Mitsuyoshi Ueda; Atsuo Tanaka

  Memoirs of the Faculty of Engineering, Kyoto University, 1992, Peer-reviewed

  
• Physiological roles of acetoacetyl-CoA thiolase in ┣DBn(/)-┫DB-alkane utilization yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB -Possible contribution to alkane degradation and sterol biosynthesis

  植田 充美

  J. Biochem.,112/6,845-848, 1992, Peer-reviewed

  
• Expression cloning of catalase genomic gene Genomic DNA expression library of ┣DBCandida(/)-┫DB ┣DBboidinii(/)-┫DB in ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB

  植田 充美

  Mem. Fav. Eng. Kyoto Univ.,54/4,215-220, 1992, Peer-reviewed

  
• LOCALIZATION OF CANDIDA-TROPICALIS PEROXISOMAL ISOCITRATE LYASE HIGHLY EXPRESSED IN PEROXISOME-PROLIFERATED SACCHAROMYCES-CEREVISIAE

  Y KAMADA; M UEDA; H ATOMI; K ODA; T KURIHARA; N NAITO; R UKITA; N KAMASAWA; M OSUMI; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1992, Peer-reviewed

  
• Construction and Expression of Truncated Candida tropicalis Isocitrate Lyase Genes for Studying Transport Signals to Peroxisomes.

  ASAWATRERATANAKUL P; KAMADA Y; ATOMI H; UEDA M; TANAKA A

  Annu Reports ICBiotech, 1992, Peer-reviewed

  
• PRESENCE OF 2 TRANSCRIBED MALATE SYNTHASE GENES IN AN NORMAL-ALKANE-UTILIZING YEAST, CANDIDA-TROPICALIS

  M HIKIDA; H ATOMI; Y FUKUDA; A AOKI; T HISHIDA; Y TERANISHI; M UEDA; A TANAKA

  JOURNAL OF BIOCHEMISTRY, Dec. 1991, Peer-reviewed

  
• HIGH-LEVEL EXPRESSION OF ISOCITRATE LYASE GENE OF NORMAL-ALKANE-UTILIZING YEAST CANDIDA-TROPICALIS IN SACCHAROMYCES-CEREVISIAE

  K ODA; H ATOMI; M UEDA; J KONDO; Y TERANISHI; A TANAKA

  ARCHIVES OF MICROBIOLOGY, Nov. 1991, Peer-reviewed

  
• GENES ENCODING PEROXISOMAL ENZYMES ARE NOT NECESSARILY ASSIGNED ON THE SAME CHROMOSOME OF AN NORMAL-ALKANE-UTILIZABLE YEAST CANDIDA-TROPICALIS

  Y FUKUDA; H ATOMI; T KURIHARA; M HIKIDA; M UEDA; A TANAKA

  FEBS LETTERS, Jul. 1991, Peer-reviewed

  
• BIOSYNTHESIS OF MUTANT BETA-D-GALACTOSIDASES CONTAINING NONNATURAL AROMATIC-AMINO-ACIDS BY ESCHERICHIA-COLI

  T UEDA; M UEDA; A TANAKA; M SISIDO; Y IMANISHI

  BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, May 1991, Peer-reviewed

  
• Presence of two transcribed malate synthase genes in an ┣DBn(/)-┫DB-alkane-utilizable yeast, ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  J. Biochem.,110/6,909-914, 1991, Peer-reviewed

  
• High level expression isocitrate lyase gene of ┣DBn(/)-┫DB-alkane-utilizing yeast ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB in ┣DBSaccharomyces(/)-┫DB ┣DBcerevisiae(/)-┫DB

  植田 充美

  Arch. Microbiol.,156/6,439-443, 1991, Peer-reviewed

  
• Formation of yellow pigments by a mutant of ┣DBMonascus(/)-┫DB sp.

  植田 充美

  Ann. Rep. ICBiotech.,14/,296-298, 1991, Peer-reviewed

  
• DEGRADATION OF PEROXISOMAL CATALASE IN AN NORMAL-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS

  H OKAMOTO; M UEDA; K YAMANOI; R UKITA; N NAITO; M OSUMI; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1991, Peer-reviewed

  
• Peroxisome of hydrocarbon assimilating yeast.Analysis of cell organelle function and future development.

  植田充美; 田中渥夫

  バイオサイエンスとインダストリー, Dec. 1990, Peer-reviewed

  
• PEROXISOMAL ISOCITRATE LYASE OF THE NORMAL-ALKANE ASSIMILATING YEAST CANDIDA-TROPICALIS - GENE ANALYSIS AND CHARACTERIZATION

  H ATOMI; M UEDA; M HIKIDA; T HISHIDA; Y TERANISHI; A TANAKA

  JOURNAL OF BIOCHEMISTRY, Feb. 1990, Peer-reviewed

  
• Isolation of the gene encoding yeast peroxisomal isocitrate lyase by a combination of the plaque hybridization with non-radioactive probes and the amplification of phages in a small scale

  Mitsuyoshi Ueda; Masaki Hikida; Haruyuki Atomi; Atsuo Tanaka

  Memoirs of the Faculty of Engineering, Kyoto University, 1990, Peer-reviewed

  Access this paper :

  
• Peroxisomes in an ┣DBn(/)-┫DB-assimilating yeast ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  Bioscience and Industry,48/12,1167-1174, 1990, Peer-reviewed

  
• Peroxisomal isocitrate lyase of the ┣DBn(/)-┫DB-alkane -assimilating yeast ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  J. Biochem.,107/2,262-266, 1990, Peer-reviewed

  
• Cloning of catalase gene of a methanol-utilizable yeast, ┣DBKloeckera(/)-┫DB sp. (┣DBCandida(/)-┫DB ┣DBboidinii(/)-┫DB) 2201

  植田 充美

  Ann. Rep. ICBiotech.,13/,105-112, 1990, Peer-reviewed

  
• APPLICATION OF THE FREEZE-BLAST METHOD TO DISRUPTION OF CULTURED PLANT-CELLS

  Y OMORI; M TSUMURA; T ICHIDA; H NAKAJIMA; M UEDA; F SATO; Y YAMADA; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1990, Peer-reviewed

  
• PEROXISOMAL ACETOACETYL-COA THIOLASE AND 3-KETOACYL-COA THIOLASE FROM AN NORMAL-ALKANE-UTILIZING YEAST, CANDIDA-TROPICALIS - PURIFICATION AND CHARACTERIZATION

  T KURIHARA; M UEDA; A TANAKA

  JOURNAL OF BIOCHEMISTRY, Sep. 1989, Peer-reviewed

  
• Yeast peroxisomes-organized assemblies of specific enzymes

  植田 充美

  CHIMICA oggi,7/5,15-19, 1989, Peer-reviewed

  
• Efficient expression of peroxidatic activity of catalase in the coupled system with glucose oxidase - a model of yeast peroxisomes

  Toshiya Kawaguchi; Mitsuyoshi Ueda; Atsuo Tanaka; Kazuo Teramoto

  Biocatalysis and Biotransformation, 1989, Peer-reviewed

  
• Construction of a photo-controllable enzyme reaction system by co-immobilization of an enzyme and a semiconductor

  Akihisa Aoki; Mitsuyoshi Ueda; Hiroki Nakajima; Atsuo Tanaka

  Biocatalysis and Biotransformation, 1989, Peer-reviewed

  
• CHARACTERIZATION OF PEROXISOMES IN AN NORMAL-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS, GROWN ON GLUCOSE AND PROPIONATE

  M UEDA; S MOZAFFAR; H ATOMI; M OSUMI; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1989, Peer-reviewed

  
• CHARACTERIZATION OF PEROXISOMES IN AN NORMAL-ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS, GROWN ON GLUCOSE AND PROPIONATE

  M UEDA; S MOZAFFAR; H ATOMI; M OSUMI; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1989, Peer-reviewed

  
• A NOVEL METHOD - A FREEZE-BLAST METHOD TO DISRUPT MICROBIAL-CELLS

  Y OMORI; T ICHIDA; R UKITA; M OSUMI; M UEDA; A TANAKA

  JOURNAL OF FERMENTATION AND BIOENGINEERING, 1989, Peer-reviewed

  
• Purification and comparison of peroxisomal and cytosolic catalases from a methanol-grown yeast, Kloeckera sp. 2201.

  UEDA M; MOZAFFAR S; TANAKA A

  Mem Fac Eng Kyoto Univ, Jul. 1988, Peer-reviewed

  
• OCCURRENCE AND POSSIBLE ROLES OF ACETOACETYL-COA THIOLASE AND 3-KETOACYL-COA THIOLASE IN PEROXISOMES OF AN NORMAL-ALKANE-GROWN YEAST, CANDIDA-TROPICALIS

  T KURIHARA; M UEDA; A TANAKA

  FEBS LETTERS, Feb. 1988, Peer-reviewed

  
• CATALASE GENE OF THE YEAST CANDIDA-TROPICALIS - SEQUENCE-ANALYSIS AND COMPARISON WITH PEROXISOMAL AND CYTOSOLIC CATALASES FROM OTHER SOURCES

  H OKADA; M UEDA; T SUGAYA; H ATOMI; S MOZAFFAR; T HISHIDA; Y TERANISHI; K OKAZAKI; T TAKECHI; T KAMIRYO; A TANAKA

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Dec. 1987, Peer-reviewed

  
• ISOLATION OF SEVERAL CDNAS ENCODING YEAST PEROXISOMAL ENZYMES

  M UEDA; H OKADA; T HISHIDA; Y TERANISHI; A TANAKA

  FEBS LETTERS, Aug. 1987, Peer-reviewed

  
• RELATIONSHIP BETWEEN ENOYL-COA HYDRATASE AND A PEROXISOMAL BIFUNCTIONAL ENZYME, ENOYL-COA HYDRATASE-3-HYDROXYACYL-COA DEHYDROGENASE, FROM AN N-ALKANE-UTILIZING YEAST, CANDIDA-TROPICALIS

  M UEDA; T MORIKAWA; H OKADA; A TANAKA

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, Aug. 1987, Peer-reviewed

  
• FORMATION OF SEVERAL ENZYMES ASSOCIATED WITH ALKANE UTILIZATION BY YEAST

  A TANAKA; M UEDA; H OKADA; S FUKUI

  ANNALS OF THE NEW YORK ACADEMY OF SCIENCES, Jun. 1987, Peer-reviewed

  
• ISOCITRATE LYASE AND MALATE SYNTHASE OF CANDIDA-TROPICALIS GROWN ON DIFFERENT CARBON-SOURCES

  H OKADA; M UEDA; M UCHIDA; A TANAKA

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, Mar. 1987, Peer-reviewed

  
• SOME PROPERTIES OF PEROXISOME-ASSOCIATED D-AMINO-ACID OXIDASE FROM CANDIDA-TROPICALIS

  M YOSHIZAWA; M UEDA; S MOZAFFAR; A TANAKA

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, Oct. 1986, Peer-reviewed

  
• PROPERTIES OF CATALASE PURIFIED FROM A METHANOL-GROWN YEAST, KLOECKERA-SP-2201

  S MOZAFFAR; M UEDA; K KITATSUJI; S SHIMIZU; M OSUMI; A TANAKA

  EUROPEAN JOURNAL OF BIOCHEMISTRY, Mar. 1986, Peer-reviewed

  
• PURIFICATION OF PEROXISOMAL MALATE SYNTHASE FROM ALKANE-GROWN CANDIDA-TROPICALIS AND SOME PROPERTIES OF THE PURIFIED ENZYME

  H OKADA; M UEDA; A TANAKA

  ARCHIVES OF MICROBIOLOGY, Mar. 1986, Peer-reviewed

  
• PROPERTIES OF ISOCITRATE LYASE FROM AN ALKANE-UTILIZABLE YEAST, CANDIDA-TROPICALIS

  M UCHIDA; M UEDA; T MATSUKI; H OKADA; A TANAKA; S FUKUI

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, Jan. 1986, Peer-reviewed

  
• 炭化水素生育酵母のペルオキシソーム

  植田 充美

  醗酵工学会誌,63/2,175-190, 1985, Peer-reviewed

  
• Peroxisomes from ┣DBn(/)-┫DB-alkane-assimilating yeasts

  植田 充美

  ,63/2,175-190, 1985, Peer-reviewed

  
• PEROXISOMAL LOCALIZATION OF ENZYMES RELATED TO FATTY-ACID BETA-OXIDATION IN AN NORMAL-ALKANE-GROWN YEAST, CANDIDA-TROPICALIS

  M UEDA; K YAMANOI; T MORIKAWA; H OKADA; A TANAKA

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1985, Peer-reviewed

  
• PURIFICATION OF A NOVEL PROPIONATE-ACTIVATING (PROPIONYLHYROXAMATE-FORMING) ENZYME FROM PROPIONATE-GROWN CELLS OF CANDIDA-TROPICALIS

  M UEDA; H OKADA; A TANAKA; S FUKUI

  AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1985, Peer-reviewed

  
• ENHANCEMENT OF CARNITINE ACETYLTRANSFERASE SYNTHESIS IN ALKANE-GROWN CELLS AND PROPIONATE-GROWN CELLS OF CANDIDA-TROPICALIS

  M UEDA; A TANAKA; S FUKUI

  ARCHIVES OF MICROBIOLOGY, 1985, Peer-reviewed

  
• PEROXISOMES OF YEAST GROWN ON NORMAL-ALKANE

  M UEDA; A TANAKA

  HAKKOKOGAKU KAISHI-JOURNAL OF THE SOCIETY OF FERMENTATION TECHNOLOGY, 1985, Peer-reviewed

  
• PEROXISOMES OF ALKANE-UTILIZING YEASTS: FORMATION OF SEVERAL PEROXISOME-ASSOCIATED ENZYMES.

  Saburo Fukui; Mitsuyoshi Ueda; Takao Yamada; Atsuo Tanaka

  1984, Peer-reviewed

  
• Synthesis ┣DBin(/)-┫DB ┣DBvitro(/)-┫DB of precursor-type carnitine acetyltransferase with messenger RNA from ┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DB

  植田 充美

  Eur. J. Biochem.,138/3,451-457, 1984, Peer-reviewed

  
• SYNTHESIS INVITRO OF PRECURSOR-TYPE CARNITINE ACETYLTRANSFERASE WITH MESSENGER-RNA FROM CANDIDA-TROPICALIS

  M UEDA; A TANAKA; S HORIKAWA; S NUMA; S FUKUI

  EUROPEAN JOURNAL OF BIOCHEMISTRY, 1984, Peer-reviewed

  
• CHARACTERIZATION OF PEROXISOMAL AND MITOCHONDRIAL CARNITINE ACETYLTRANSFERASES PURIFIED FROM ALKANE-GROWN CANDIDA-TROPICALIS

  M UEDA; A TANAKA; S FUKUI

  EUROPEAN JOURNAL OF BIOCHEMISTRY, 1984, Peer-reviewed

  
• INDUCTION AND SUBCELLULAR-LOCALIZATION OF ENZYMES PARTICIPATING IN PROPIONATE METABOLISM IN CANDIDA-TROPICALIS

  M UEDA; H OKADA; A TANAKA; M OSUMI; S FUKUI

  ARCHIVES OF MICROBIOLOGY, 1983, Peer-reviewed

  
• PEROXISOMAL AND MITOCHONDRIAL CARNITINE ACETYLTRANSFERASES IN ALKANE-GROWN YEAST CANDIDA-TROPICALIS

  M UEDA; A TANAKA; S FUKUI

  EUROPEAN JOURNAL OF BIOCHEMISTRY, 1982, Peer-reviewed

  
• ┣DBn(/)-┫DB-アルカン生育酵母┣DBCandida(/)-┫DB ┣DBtropicalis(/)-┫DBにおけるCarnitine acetyltransferaseの細胞内分布

  植田 充美

  ビタミン誌,53/4,177-181, 1979, Peer-reviewed

  
• Localization of carnitine acetyltransferase in peroxisomes and in mitochondria of n-alkane-grown candida tropicalis

  S. Kawamoto; M. Ueda; C. Nozaki; M. Yamamura; A. Tanaka; S. Fukui

  FEBS Letters, 1978, Peer-reviewed